PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3NH7

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	11	AASGFTFSNYTLN	PPBLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV3-NL1*01	40	H2	10	H2-10-2	12	YTSSSGSLTG	BBPAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARERWHVRGYFDH	BPPBBDABPBPAB
I	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	10	AASGFTFSNYTLN	PBBLBPAAABPBB
I	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV3-NL1*01	40	H2	10	H2-10-2	12	YTSSSGSLTG	BBPAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARERWHVRGYFDH	BPPBBDABPBPAB
J	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	9	AASGFTFSNYTLN	PBBLBPAADBPBB
J	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV3-NL1*01	40	H2	10	H2-10-2	12	YTSSSGSLTG	BBPAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARERWHVRGYFDH	BPPBBDABPBPAB
K	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV3-NL1*01	69.2	H1	13	H1-13-1	10	AASGFTFSNYTLN	PBBLBPAADBPBB
K	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV3-NL1*01	40	H2	10	H2-10-2	12	YTSSSGSLTG	BBPAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	98.6	Hu_IGHV	-1	H3	13	H3-13-*	-1	ARERWHVRGYFDH	BPPBBDABPBPAB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	63.6	L1	11	L1-11-3	16	SGDSLGSKYVI	BBPLAADBPBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	75	L2	8	L2-8-5	21	YDDSNRPS	DPADPBPP
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV	-1	L3	11	L3-11-cis7-*	-1	STFTMSGNGTV	BBPPABpLBBB
M	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	63.6	L1	11	L1-11-3	16	SGDSLGSKYVI	BBPLAADBPBB
M	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	75	L2	8	L2-8-5	24	YDDSNRPS	DPADPBPP
M	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV	-1	L3	11	L3-11-*	-1	STFTMSGNGTV	BBPBAPLLBBB
N	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	63.6	L1	11	L1-11-3	16	SGDSLGSKYVI	BBPLAADBPBB
N	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	75	L2	8	L2-8-5	22	YDDSNRPS	DPADBBPP
N	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV	-1	L3	11	L3-11-*	-1	STFTMSGNGTV	BBPBABLLBBB
O	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	63.6	L1	11	L1-11-3	17	SGDSLGSKYVI	BBPLAADBPBB
O	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV3-1*01	75	L2	8	L2-8-5	24	YDDSNRPS	DPADPBPP
O	lambda	Homo.sapiens	Hu_IGLV3-1*01	92.4	Hu_IGLV	-1	L3	11	L3-11-*	-1	STFTMSGNGTV	BBPBABLLBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019