PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3KYM

#CDRs = 6; #Clusters = 14.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	90.9	L1	11	L1-11-1	18	RASQSVSSYLA	BBABPDGDPBB
A	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-1	10	YDASNRAT	BLLDPPPP
A	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	16	QQYDKWPLT	BPDDBPpPB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	17	AASGFTFSIYPMF	BBBLBPAAAPPBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	50	H2	10	H2-10-2	19	WIGPSGGITK	BBPAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV	-1	H3	12	H3-12-*	-1	AREGHNDWYFDL	DGPPPDBPBBAB
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	90.9	L1	11	L1-11-1	13	RASQSVSSYLA	BBABPDGDPBB
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-1	18	YDASNRAT	BLLDPBPP
C	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	11	QQYDKWPLT	BPDABPpPB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	13	AASGFTFSIYPMF	PBBLBPAADBPBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	50	H2	10	H2-10-2	18	WIGPSGGITK	BBPAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV	-1	H3	12	H3-12-cis6-*	-1	AREGHNDWYFDL	BPPAGdBPBBDB
E	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	90.9	L1	11	L1-11-1	16	RASQSVSSYLA	BPABPAGDPBB
E	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-1	10	YDASNRAT	BLLDPPPP
E	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	12	QQYDKWPLT	BPDABPpPB
F	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	19	AASGFTFSIYPMF	BPBLBPAADBPBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	50	H2	10	H2-10-2	13	WIGPSGGITK	BBPAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV	-1	H3	12	H3-12-*	-1	AREGHNDWYFDL	BBPPPABPGBAB
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	90.9	L1	11	L1-11-1	12	RASQSVSSYLA	BBABPDGDPBB
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-1	9	YDASNRAT	BLLDBPPP
G	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	14	QQYDKWPLT	BBDABPpPB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	13	AASGFTFSIYPMF	PPBLBPAAAPPBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	50	H2	10	H2-10-*	-1	WIGPSGGITK	BBBAALDDGB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV	-1	H3	12	H3-12-cis7-*	-1	AREGHNDWYFDL	BPPPPLbLBBAB
I	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	90.9	L1	11	L1-11-1	15	RASQSVSSYLA	BBABPAGDPBB
I	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-1	15	YDASNRAT	BLGDPPPP
I	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	19	QQYDKWPLT	BBBABPpBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	12	AASGFTFSIYPMF	PBBLBPAAAPPBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	50	H2	10	H2-10-*	-1	WIGPSGGITK	BBPPLGLBBB
J	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV	-1	H3	12	H3-12-*	-1	AREGHNDWYFDL	BBPPPLPABBAB
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	90.9	L1	11	L1-11-1	12	RASQSVSSYLA	BPABPDGDBBB
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-1	12	YDASNRAT	BLLDBPPP
K	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	10	QQYDKWPLT	BPDABPpPB
L	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	22	AASGFTFSIYPMF	PBBLBPAAAPPBB
L	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	50	H2	10	H2-10-2	30	WIGPSGGITK	BBPAALABBD
L	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV	-1	H3	12	H3-12-cis7-*	-1	AREGHNDWYFDL	DGPPABbLBBAB
M	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	90.9	L1	11	L1-11-1	19	RASQSVSSYLA	BBABPDGDBBB
M	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-1	12	YDASNRAT	BLGDPPPP
M	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-1	15	QQYDKWPLT	BBDABPpPB
N	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	18	AASGFTFSIYPMF	BBBLBPAAAPPBB
N	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	50	H2	10	H2-10-4	37	WIGPSGGITK	BBPPGPAPBB
N	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV	-1	H3	12	H3-12-cis7-*	-1	AREGHNDWYFDL	BBPABDlPBBDB
O	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	90.9	L1	11	L1-11-*	-1	RASQSVSSYLA	PBABPBPDAPB
O	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV3D-15*01	75	L2	8	L2-8-*	-1	YDASNRAT	AGGBBBPP
O	kappa	Homo.sapiens	Hu_IGKV3D-15*01	94.2	Hu_IGKV	-1	L3	9	L3-9-cis7-*	-1	QQYDKWPLT	DGBBDBbPB
P	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	76.9	H1	13	H1-13-1	19	AASGFTFSIYPMF	PBBLBPAAAPPBB
P	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	50	H2	10	H2-10-cis8-*	-1	WIGPSGGITK	BBPPGALlLB
P	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV	-1	H3	12	H3-12-*	-1	AREGHNDWYFDL	DGBBLLBPBPDB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019