PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3KJ4

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Mus.musculus	Mo_IGKV8-21*01	98.5	Mo_IGKV8-21*01	94.1	L1	17	L1-17-1	20	KSSQSLLNSRNRKNYLA	BBAPPABPAADLPPPBB
B	kappa	Mus.musculus	Mo_IGKV8-21*01	98.5	Mo_IGKV8-21*01	100	L2	8	L2-8-1	25	YWASTRES	BLLDPPPP
B	kappa	Mus.musculus	Mo_IGKV8-21*01	98.5	Mo_IGKV	-1	L3	8	L3-8-1	14	MQSYNLFT	BPDABGBB
C	heavy	Mus.musculus	Mo_IGHV2-9*01	91.8	Mo_IGHV2-9*01	76.9	H1	13	H1-13-1	20	SVSGFSLSSYGVH	PBBLBPAADBPBB
C	heavy	Mus.musculus	Mo_IGHV2-9*01	91.8	Mo_IGHV2-9*01	66.7	H2	9	H2-9-*	-1	VIWSGGNTH	BBPAPAPBB
H	heavy	Mus.musculus	Mo_IGHV2-9*01	91.8	Mo_IGHV2-9*01	76.9	H1	13	H1-13-1	20	SVSGFSLSSYGVH	PBBLBPAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-9*01	91.8	Mo_IGHV2-9*01	66.7	H2	9	H2-9-*	-1	VIWSGGNTH	BBPAPAPBB
H	heavy	Mus.musculus	Mo_IGHV2-9*01	91.8	Mo_IGHV	-1	H3	14	H3-14-cis4-*	-1	ARVGIYYEGAWFAY	BBLlGGBPGBBLAB
L	kappa	Mus.musculus	Mo_IGKV8-21*01	98.5	Mo_IGKV8-21*01	94.1	L1	17	L1-17-1	34	KSSQSLLNSRNRKNYLA	PPABPDBPABLLPBPBB
L	kappa	Mus.musculus	Mo_IGKV8-21*01	98.5	Mo_IGKV8-21*01	100	L2	8	L2-8-1	14	YWASTRES	BLLDBPPP
L	kappa	Mus.musculus	Mo_IGKV8-21*01	98.5	Mo_IGKV	-1	L3	8	L3-8-1	15	MQSYNLFT	BPDABGBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019