PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3JUY

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	46.2	H1	13	H1-13-1	12	QASGYRFSHFTVH	BPBLBPAAABPBP
A	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	60	H2	10	H2-10-1	10	WINPYNGNKE	BBBAADLPBB
A	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV	-1	H3	20	H3-20-*	-1	ARVGEWGWDDSPYDNYYMDV	BPPPPPPADPPPLADAPPAB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	41.7	L1	12	L1-12-2	36	RSSHSIRSRRVA	BPABPPAALBBB
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	50	L2	8	L2-8-1	6	HGVSNRAS	BLLDPPPP
A	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QVYGASSYT	BBBBADBBB
B	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	46.2	H1	13	H1-13-1	11	QASGYRFSHFTVH	PPBLBPAAABPBP
B	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	60	H2	10	H2-10-1	8	WINPYNGNKE	BBPAADLPBB
B	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV	-1	H3	20	H3-20-*	-1	ARVGEWGWDDSPYDNYYMDV	BPPPPPPADPPPLADAPPAB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	41.7	L1	12	L1-12-2	35	RSSHSIRSRRVA	BPABPBAALPBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	50	L2	8	L2-8-1	6	HGVSNRAS	BLLDPPPP
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QVYGASSYT	BBBBADBBB
C	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	46.2	H1	13	H1-13-1	9	QASGYRFSHFTVH	PBBLBPAADBPBP
C	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	60	H2	10	H2-10-1	9	WINPYNGNKE	BBPAADLPBB
C	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV	-1	H3	20	H3-20-*	-1	ARVGEWGWDDSPYDNYYMDV	BPPPPPPABBPPLADAPPAB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	41.7	L1	12	L1-12-2	36	RSSHSIRSRRVA	BPABPBAALPBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	50	L2	8	L2-8-1	11	HGVSNRAS	BLGDPPPP
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QVYGASSYT	BBBBADBBB
D	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	46.2	H1	13	H1-13-1	10	QASGYRFSHFTVH	BPBLBPAAABPBP
D	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	60	H2	10	H2-10-1	9	WINPYNGNKE	BBPAADLPBB
D	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV	-1	H3	20	H3-20-*	-1	ARVGEWGWDDSPYDNYYMDV	BPPPPPPABPPPLADAPPAB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	41.7	L1	12	L1-12-2	35	RSSHSIRSRRVA	BPABPPAALPBB
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	50	L2	8	L2-8-1	24	HGVSNRAS	BLGAPBPP
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QVYGASSYT	BBBBADBBB
E	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	46.2	H1	13	H1-13-1	11	QASGYRFSHFTVH	PPBLBPAAABPBP
E	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	60	H2	10	H2-10-1	8	WINPYNGNKE	BBPAADLPBB
E	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV	-1	H3	20	H3-20-*	-1	ARVGEWGWDDSPYDNYYMDV	BPPPPPPABBPPLADAPBAB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	41.7	L1	12	L1-12-2	38	RSSHSIRSRRVA	BPAPBPAALPBB
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	50	L2	8	L2-8-1	8	HGVSNRAS	BLGDPPPP
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QVYGASSYT	BBBBADBBB
F	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	46.2	H1	13	H1-13-1	12	QASGYRFSHFTVH	PPBLBPAAABPBP
F	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV1-3*01	60	H2	10	H2-10-1	10	WINPYNGNKE	BBPAADLPBB
F	heavy	Homo.sapiens	Hu_IGHV1-3*01	87.7	Hu_IGHV	-1	H3	20	H3-20-*	-1	ARVGEWGWDDSPYDNYYMDV	BPPPPPPPLPPPLADAPPAB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	41.7	L1	12	L1-12-2	36	RSSHSIRSRRVA	BPABPPAALPBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV3-20*01	50	L2	8	L2-8-1	19	HGVSNRAS	BLGDPBPP
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	88.4	Hu_IGKV	-1	L3	9	L3-9-*	-1	QVYGASSYT	BBBBADBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019