PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3J8Z

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV1-87*01	100	H1	13	H1-13-1	9	KASGYTFTSYWMQ	PPBLBPAAABPBB
F	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV1-87*01	90	H2	10	H2-10-1	7	AIYPGDGYTR	BBBAADLPBB
F	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV	-1	H3	14	H3-14-*	-1	ARTYAGYYVGYFDY	BPPPPGAPBPPPAB
G	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV1-87*01	100	H1	13	H1-13-1	9	KASGYTFTSYWMQ	PPBLBPAAABPBB
G	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV1-87*01	90	H2	10	H2-10-1	7	AIYPGDGYTR	BBBAADLPBB
G	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV	-1	H3	14	H3-14-*	-1	ARTYAGYYVGYFDY	BPPPPGAPBPPPAB
H	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV1-87*01	100	H1	13	H1-13-1	9	KASGYTFTSYWMQ	PPBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV1-87*01	90	H2	10	H2-10-1	7	AIYPGDGYTR	BBBAADLPBB
H	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV	-1	H3	14	H3-14-*	-1	ARTYAGYYVGYFDY	BPPPPGAPBPPPAB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV1-87*01	100	H1	13	H1-13-1	9	KASGYTFTSYWMQ	PPBLBPAAABPBB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV1-87*01	90	H2	10	H2-10-1	7	AIYPGDGYTR	BBBAADLPBB
I	heavy	Mus.musculus	Mo_IGHV1-87*01	94	Mo_IGHV	-1	H3	14	H3-14-*	-1	ARTYAGYYVGYFDY	BPPPPGAPBPPPAB
J	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	82.4	L1	17	L1-17-1	10	KSSQSLFDSRNQKNYLA	BBABPAPBAADLBPPBB
J	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100	L2	8	L2-8-1	6	YFASTRES	BLLDPPPP
J	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV	-1	L3	9	L3-9-cis7-2	16	QQHYSTPYT	BPDBGPpPB
K	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	82.4	L1	17	L1-17-1	10	KSSQSLFDSRNQKNYLA	BBABPAPBAADLBPPBB
K	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100	L2	8	L2-8-1	6	YFASTRES	BLLDPPPP
K	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV	-1	L3	9	L3-9-cis7-2	16	QQHYSTPYT	BPDBGPpPB
L	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	82.4	L1	17	L1-17-1	10	KSSQSLFDSRNQKNYLA	BBABPAPBAADLBPPBB
L	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100	L2	8	L2-8-1	6	YFASTRES	BLLDPPPP
L	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV	-1	L3	9	L3-9-cis7-2	16	QQHYSTPYT	BPDBGPpPB
M	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	82.4	L1	17	L1-17-1	10	KSSQSLFDSRNQKNYLA	BBABPAPBAADLBPPBB
M	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV8-24*01	100	L2	8	L2-8-1	6	YFASTRES	BLLDPPPP
M	kappa	Mus.musculus	Mo_IGKV8-24*01	97.1	Mo_IGKV	-1	L3	9	L3-9-cis7-2	16	QQHYSTPYT	BPDBGPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019