PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3J5M

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	CDRLenMismatch	-1	L1	9	L1-9-*	-1	TAASYGHMT	PPABPGPBB
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	37.5	L2	8	L2-8-1	14	FATSKRAS	BLGDBPPP
C	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV	-1	L3	5	L3-5-*	-1	QQLEF	BBGAB
D	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	CDRLenMismatch	-1	H1	14	H1-14-*	-1	WTSEDIFERTELIH	BBPAAAAAAPABBP
D	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	Hu_IGHV1-46*01	10	H2	10	H2-10-1	16	WVKTVTGAVN	BBPAADLPBB
D	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARQKFYTGGQGWYFDL	BBBPPLAGDAGPBBAB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	CDRLenMismatch	-1	L1	9	L1-9-*	-1	TAASYGHMT	PPABPGPBB
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	37.5	L2	8	L2-8-1	14	FATSKRAS	BLGDBPPP
G	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV	-1	L3	5	L3-5-*	-1	QQLEF	BBGAB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	CDRLenMismatch	-1	H1	14	H1-14-*	-1	WTSEDIFERTELIH	BBPAAAAAAPABBP
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	Hu_IGHV1-46*01	10	H2	10	H2-10-1	16	WVKTVTGAVN	BBPAADLPBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARQKFYTGGQGWYFDL	BBBPPLAGDAGPBBAB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	CDRLenMismatch	-1	L1	9	L1-9-*	-1	TAASYGHMT	PPABPGPBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	37.5	L2	8	L2-8-1	14	FATSKRAS	BLGDBPPP
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV	-1	L3	5	L3-5-*	-1	QQLEF	BBGAB
L	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	CDRLenMismatch	-1	H1	14	H1-14-*	-1	WTSEDIFERTELIH	BBPAAAAAAPABBP
L	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	Hu_IGHV1-46*01	10	H2	10	H2-10-1	16	WVKTVTGAVN	BBPAADLPBB
L	heavy	Homo.sapiens	Hu_IGHV1-46*01	62.2	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARQKFYTGGQGWYFDL	BBBPPLAGDAGPBBAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019