PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3J42

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV5-17*02	100	H1	13	H1-13-1	9	AASGFTFSSFGMH	PBBLBPAADBPBB
G	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV5-17*02	80	H2	10	H2-10-2	16	YISSGSSTLH	BBPAALAPBB
G	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV	-1	H3	13	H3-13-cis7-*	-1	ARWGNYPHYAMDY	BPPBLPaPPBPAB
H	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV6-20*01	100	L1	11	L1-11-cis8-*	-1	KASENVGTYVS	BPABPBPlDPB
H	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV6-20*01	100	L2	8	L2-8-4	13	YGASNRYT	BGDDPPPP
H	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	GQSYSTPYT	BPDDBPpPB
I	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV5-17*02	100	H1	13	H1-13-1	9	AASGFTFSSFGMH	PBBLBPAADBPBB
I	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV5-17*02	80	H2	10	H2-10-2	16	YISSGSSTLH	BBPAALAPBB
I	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV	-1	H3	13	H3-13-cis7-*	-1	ARWGNYPHYAMDY	BPPBLPaPPBPAB
J	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV6-20*01	100	L1	11	L1-11-cis8-*	-1	KASENVGTYVS	BPABPBPlDPB
J	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV6-20*01	100	L2	8	L2-8-4	13	YGASNRYT	BGDDPPPP
J	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	GQSYSTPYT	BPDDBPpPB
K	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV5-17*02	100	H1	13	H1-13-1	9	AASGFTFSSFGMH	PBBLBPAADBPBB
K	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV5-17*02	80	H2	10	H2-10-2	16	YISSGSSTLH	BBPAALAPBB
K	heavy	Mus.musculus	Mo_IGHV5-17*02	100	Mo_IGHV	-1	H3	13	H3-13-cis7-*	-1	ARWGNYPHYAMDY	BPPBLPaPPBPAB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV6-20*01	100	L1	11	L1-11-cis8-*	-1	KASENVGTYVS	BPABPBPlDPB
L	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV6-20*01	100	L2	8	L2-8-4	13	YGASNRYT	BGDDPPPP
L	kappa	Mus.musculus	Mo_IGKV6-20*01	98.5	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	GQSYSTPYT	BPDDBPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019