PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3FKU

#CDRs = 6; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
S	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	61.5	H1	13	H1-13-*	-1	TSSEVTFSSFAIS	BPABAPAAABPBB
S	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	17	GISPMFGTPN	BBPAAALPPB
S	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	ARSPSYICSGGTCVFDH	BPBAPABPDBAAPBBDB
S	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	100	L1	13	L1-13-1	36	TGNSNNVGNQGAA	BBBAADAADAGBB
S	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	87.5	L2	8	L2-8-*	-1	YRNNDRPS	PAALBPPA
S	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	19	STWDSSLSAVV	BBPPADDLBPP
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	61.5	H1	13	H1-13-*	-1	TSSEVTFSSFAIS	BPAPAPAAABPPB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	17	GISPMFGTPN	BBPAADLPPB
T	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	ARSPSYICSGGTCVFDH	BPBAPABBDBAAPPBAB
T	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	100	L1	13	L1-13-*	-1	TGNSNNVGNQGAA	BBPAADAAADGBP
T	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	87.5	L2	8	L2-8-*	-1	YRNNDRPS	PAALBPPA
T	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	20	STWDSSLSAVV	BBBBAAALBPB
U	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	61.5	H1	13	H1-13-*	-1	TSSEVTFSSFAIS	BPAPAPDAABPBB
U	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	19	GISPMFGTPN	BBBAADLPPB
U	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	ARSPSYICSGGTCVFDH	BPBAPABBDBAAPBBAB
U	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	100	L1	13	L1-13-*	-1	TGNSNNVGNQGAA	BBPAADAAADGBB
U	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	87.5	L2	8	L2-8-*	-1	YRNNDRPS	PADLPPPA
U	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	16	STWDSSLSAVV	BBPBAAALBBB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	61.5	H1	13	H1-13-2	38	TSSEVTFSSFAIS	BPABAPAAABPBB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	23	GISPMFGTPN	BBPAAAGPBB
X	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	ARSPSYICSGGTCVFDH	BPPAPABPDBAAPBBAB
X	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	100	L1	13	L1-13-1	37	TGNSNNVGNQGAA	BBBAADAAAAGBB
X	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	87.5	L2	8	L2-8-*	-1	YRNNDRPS	PAALPPPA
X	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	16	STWDSSLSAVV	BBPBAADLBPB
Y	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	61.5	H1	13	H1-13-2	39	TSSEVTFSSFAIS	BBAPAPDAABPBB
Y	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	16	GISPMFGTPN	BBPAADLPPB
Y	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	ARSPSYICSGGTCVFDH	BPPAPABBDBAAPBBAB
Y	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	100	L1	13	L1-13-1	37	TGNSNNVGNQGAA	BBBAAAAADAGBB
Y	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	87.5	L2	8	L2-8-*	-1	YRNNDRPS	PADLBPPA
Y	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	16	STWDSSLSAVV	BBBPAAALBPB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	61.5	H1	13	H1-13-2	39	TSSEVTFSSFAIS	BPAPAAAADBPBB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV1-69*01	70	H2	10	H2-10-1	15	GISPMFGTPN	BBPAADLPBB
Z	heavy	Homo.sapiens	Hu_IGHV1-69*01	93.2	Hu_IGHV	-1	H3	17	H3-17-*	-1	ARSPSYICSGGTCVFDH	BPBAPABBDBAAPBPAB
Z	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	100	L1	13	L1-13-*	-1	TGNSNNVGNQGAA	BBPDABAADAGBB
Z	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV10-54*01	87.5	L2	8	L2-8-*	-1	YRNNDRPS	PADLPPPA
Z	lambda	Homo.sapiens	Hu_IGLV10-54*01	98.5	Hu_IGLV	-1	L3	11	L3-11-1	15	STWDSSLSAVV	BBPBAAALBPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019