PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 3B9K

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Rattus.rattus	Ra_IGKV19S2*01	94.2	Ra_IGKV19S2*01	90.9	L1	11	L1-11-2	7	QASQNIDKYIA	BPABPDLLPBB
C	kappa	Rattus.rattus	Ra_IGKV19S2*01	94.2	Ra_IGKV19S2*01	100	L2	8	L2-8-1	11	HYTSTLVS	BLGDPPPP
C	kappa	Rattus.rattus	Ra_IGKV19S2*01	94.2	Ra_IGKV	-1	L3	8	L3-8-1	15	LQYDTLYT	BPDABGBB
D	heavy	Rattus.rattus	Ra_IGHV2-1*01	94.5	Ra_IGHV2-1*01	76.9	H1	13	H1-13-1	17	SVSGFSLISDSVH	BBBLBPAADBPBB
D	heavy	Rattus.rattus	Ra_IGHV2-1*01	94.5	Ra_IGHV2-1*01	55.6	H2	9	H2-9-1	11	GIWADGSTE	BBPAALPBB
D	heavy	Rattus.rattus	Ra_IGHV2-1*01	94.5	Ra_IGHV	-1	H3	11	H3-11-*	-1	TSNRESYYFDY	BBBADBAPPDB
H	heavy	Rattus.rattus	Ra_IGHV2-1*01	94.5	Ra_IGHV2-1*01	76.9	H1	13	H1-13-1	15	SVSGFSLISDSVH	BBBLBBAADBPBB
H	heavy	Rattus.rattus	Ra_IGHV2-1*01	94.5	Ra_IGHV2-1*01	55.6	H2	9	H2-9-1	11	GIWADGSTE	BBPAALPBB
H	heavy	Rattus.rattus	Ra_IGHV2-1*01	94.5	Ra_IGHV	-1	H3	11	H3-11-*	-1	TSNRESYYFDY	BBBADBDPPDB
L	kappa	Rattus.rattus	Ra_IGKV19S2*01	94.2	Ra_IGKV19S2*01	90.9	L1	11	L1-11-2	10	QASQNIDKYIA	BPABPDLLPBB
L	kappa	Rattus.rattus	Ra_IGKV19S2*01	94.2	Ra_IGKV19S2*01	100	L2	8	L2-8-1	9	HYTSTLVS	BLGDPPPP
L	kappa	Rattus.rattus	Ra_IGKV19S2*01	94.2	Ra_IGKV	-1	L3	8	L3-8-1	14	LQYDTLYT	BPDABGBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019