PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 2UUD

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV7-3*01	95.9	Mo_IGHV7-3*01	76.9	H1	13	H1-13-1	15	ATSGFSFTDYYMA	PBBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV7-3*01	95.9	Mo_IGHV7-3*01	91.7	H2	12	H2-12-1	10	FIRNKANGYTTD	BBPPAADLLPBB
H	heavy	Mus.musculus	Mo_IGHV7-3*01	95.9	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGDYYGAWFAY	BBPBABPBABAB
J	heavy	Mus.musculus	Mo_IGHV7-3*01	95.9	Mo_IGHV7-3*01	76.9	H1	13	H1-13-1	20	ATSGFSFTDYYMA	PBBLBPAADBPBP
J	heavy	Mus.musculus	Mo_IGHV7-3*01	95.9	Mo_IGHV7-3*01	91.7	H2	12	H2-12-1	16	FIRNKANGYTTD	BBPPAADLLPBB
J	heavy	Mus.musculus	Mo_IGHV7-3*01	95.9	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGDYYGAWFAY	BBPBAPAPABAB
K	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV1-117*01	100	L1	16	L1-16-1	29	RSSQSIVHSNGNTYLE	BBABPDPPAPAPBPBB
K	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV1-117*01	100	L2	8	L2-8-5	24	YKVSNRFS	DBADPPPP
K	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	21	FQGSHVPYT	BBBDPPpPB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV1-117*01	100	L1	16	L1-16-1	35	RSSQSIVHSNGNTYLE	PPDBPDPPAPAPBPBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV1-117*01	100	L2	8	L2-8-5	31	YKVSNRFS	APADPPPP
L	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	20	FQGSHVPYT	BPDDBPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019