PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 2OQJ

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	9	RASQSIETWLA	BBABPDGDPBB
A	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	9	YKASTLKT	BLLDPPPP
A	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BPBBGDPBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV3-23*01	30.8	H1	13	H1-13-1	18	GVSNFRISAHTMN	BBBLBBAAABPPB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV3-23*01	30	H2	10	H2-10-4	19	SISTSSTYRD	BBPPLLABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BBPBBABPBABBPPAB
D	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	8	RASQSIETWLA	BPABPDGDPBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	10	YKASTLKT	BLLDPPPP
D	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BBBBGDBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV3-23*01	30.8	H1	13	H1-13-1	19	GVSNFRISAHTMN	BBBLBPAAABPBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV3-23*01	30	H2	10	H2-10-4	21	SISTSSTYRD	BBPPLLABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BBPBBABPBABBPPAB
G	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	6	RASQSIETWLA	BBABPDGDPBB
G	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	10	YKASTLKT	BLLDPPPP
G	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BBBBGDPBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV3-23*01	30.8	H1	13	H1-13-1	18	GVSNFRISAHTMN	BBBLBBAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV3-23*01	30	H2	10	H2-10-4	20	SISTSSTYRD	BBPPLLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BPPBBABPBABBPPAB
J	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	81.8	L1	11	L1-11-1	9	RASQSIETWLA	BBABPDGDPBB
J	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV1-5*01	50	L2	8	L2-8-1	10	YKASTLKT	BLLDPPPP
J	kappa	Homo.sapiens	Hu_IGKV1-5*01	89.7	Hu_IGKV	-1	L3	9	L3-9-*	-1	QHYAGYSAT	BBBBGDPBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV3-23*01	30.8	H1	13	H1-13-1	18	GVSNFRISAHTMN	BBBLBBAAABPBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV3-23*01	30	H2	10	H2-10-4	19	SISTSSTYRD	BBPPLLABBB
K	heavy	Homo.sapiens	Hu_IGHV3-23*01	71.2	Hu_IGHV	-1	H3	16	H3-16-*	-1	ARKGSDRLSDNDPFDA	BPPBBABPBABBPPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019