PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 2LTQ

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L1	17	L1-17-*	-1	KSSQSLLNSRTRKNYLA	BBABPDPPAPGPBALBB
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L2	8	L2-8-1	37	YWASTRES	BLLDPPBP
B	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV	-1	L3	8	L3-8-1	15	KQSYNLYT	BPDABGBB
C	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100	Mo_IGHV5-12-1*01	100	H1	13	H1-13-1	21	AASGFAFSSYDMS	PPBLBPAAAPPBB
C	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100	Mo_IGHV5-12-1*01	100	H2	10	H2-10-2	22	YISSGGGSTY	BBPADLAPBB
E	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L1	17	L1-17-cis11,15-*	-1	KSSQSLLNSRTRKNYLA	BBABPDPBABpPBBlBB
E	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV8-21*01	100	L2	8	L2-8-1	29	YWASTRES	BLLAPPBP
E	kappa	Mus.musculus	Mo_IGKV8-21*01	100	Mo_IGKV	-1	L3	8	L3-8-1	15	KQSYNLYT	BPDABGBB
F	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100	Mo_IGHV5-12-1*01	100	H1	13	H1-13-1	37	AASGFAFSSYDMS	PPBLBAGAABPBB
F	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100	Mo_IGHV5-12-1*01	100	H2	10	H2-10-2	32	YISSGGGSTY	BPPABLABBB
F	heavy	Mus.musculus	Mo_IGHV5-12-1*01	100	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARPDYRSYAMDY	BBPPADALPPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019