PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 2GK0

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV1-117*01	100	L1	16	L1-16-1	23	RSSQSIVHSNGNTYLE	BPABPDPPAALPBPBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV1-117*01	100	L2	8	L2-8-5	39	YKVSNRFS	DBLDPPBP
A	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	FQGSHLPPT	BPDABPpPB
B	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV2-9*01	92.3	H1	13	H1-13-1	31	TVSGFSLTNYGVD	PBBLBBAAABBBP
B	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV2-9*01	88.9	H2	9	H2-9-1	28	VIWSGGSTN	BBPPDLPBP
H	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV2-9*01	92.3	H1	13	H1-13-1	24	TVSGFSLTNYGVD	PBBLBBAAABBBP
H	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV2-9*01	88.9	H2	9	H2-9-1	21	VIWSGGSTN	BBPADLPBB
H	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV	-1	H3	15	H3-15-*	-1	AKHWGGYYIPYGMDH	PBPDPADBLPABPAB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV1-117*01	100	L1	16	L1-16-1	15	RSSQSIVHSNGNTYLE	BPABPDPPAALPPPBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV1-117*01	100	L2	8	L2-8-5	37	YKVSNRFS	DBGDBPPP
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV	-1	L3	9	L3-9-cis7-1	8	FQGSHLPPT	BBDABPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019