PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 2GJZ

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV1-117*01	100	L1	16	L1-16-1	18	RSSQSIVHSNGNTYLE	BPABPDPPAALPBPBB
A	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV1-117*01	100	L2	8	L2-8-5	35	YKVSNRFS	DBGDPPPP
A	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV	-1	L3	9	L3-9-2	37	FQGSHLPPT	BBDAPPGPB
B	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV2-9*01	92.3	H1	13	H1-13-1	20	TVSGFSLTNYGVD	PBBLBPAAABPBP
B	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV2-9*01	88.9	H2	9	H2-9-1	19	VIWSGGSTN	BBPAALPBB
B	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV	-1	H3	15	H3-15-*	-1	AKHWGGYYIPYGMDH	BPPAPAPABPABPAB
H	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV2-9*01	92.3	H1	13	H1-13-1	20	TVSGFSLTNYGVD	PBBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV2-9*01	88.9	H2	9	H2-9-1	22	VIWSGGSTN	BBPAALPBB
H	heavy	Mus.musculus	Mo_IGHV2-9*01	97.3	Mo_IGHV	-1	H3	15	H3-15-*	-1	AKHWGGYYIPYGMDH	BPPAPABABPABBAB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV1-117*01	100	L1	16	L1-16-1	16	RSSQSIVHSNGNTYLE	BPABPAPPAALPBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV1-117*01	100	L2	8	L2-8-5	35	YKVSNRFS	DBGDPPPP
L	kappa	Mus.musculus	Mo_IGKV1-117*01	95.6	Mo_IGKV	-1	L3	9	L3-9-cis7-1	19	FQGSHLPPT	BBDAPPpPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019