PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 2FJF

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	7	RASQDVSTAVA	BPABPDGDPBB
A	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	9	YSASFLYS	BLLDPPPP
A	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	QQSYTTPPT	BPDABPpPB
B	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	12	AASGFTISDYWIH	PPBLBBAAABPBB
B	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	15	GITPAGGYTY	BBPPLLABBB
B	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BBBBAPPaLBPAB
C	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	11	RASQDVSTAVA	BPABPDGDPBB
C	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	7	YSASFLYS	BLLDPPPP
C	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	14	QQSYTTPPT	BPDABBpPB
D	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	13	AASGFTISDYWIH	PBBLBBAAABPBP
D	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	14	GITPAGGYTY	BBPPLLABBB
D	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BPBBAPPaLBPAB
E	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	7	RASQDVSTAVA	PPABPDGDPBB
E	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	8	YSASFLYS	BLLDPPPP
E	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	9	QQSYTTPPT	BPDABBpPB
F	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	15	AASGFTISDYWIH	PPBLBBAAABPBB
F	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	16	GITPAGGYTY	BBPPLLABBB
F	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BBBBAPPaLBPAB
G	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	6	RASQDVSTAVA	BPABPDGDPBB
G	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	8	YSASFLYS	BLLDPPPP
G	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	8	QQSYTTPPT	BBDABPpPB
H	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	13	AASGFTISDYWIH	PPBLBPAAABPBB
H	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	14	GITPAGGYTY	BBPPLLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BPBBAPPaLBPAB
I	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	11	AASGFTISDYWIH	PPBLBBAAABPBP
I	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	15	GITPAGGYTY	BBPPLLABBB
I	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BPBBAPPaLBPAB
J	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	10	RASQDVSTAVA	BPABPDGDPBB
J	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	8	YSASFLYS	BLLDPPPP
J	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	11	QQSYTTPPT	BPDABBpPB
K	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	13	AASGFTISDYWIH	PPBLBBAAABPBB
K	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	13	GITPAGGYTY	BBPPLLABBB
K	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BBBBAPPaLBPAB
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	8	RASQDVSTAVA	BPABPDGDPBB
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	8	YSASFLYS	BLLDPPPP
L	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	9	QQSYTTPPT	BPDABPpPB
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	7	RASQDVSTAVA	BPABPDGDPBB
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	8	YSASFLYS	BLLDBPPP
M	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQSYTTPPT	BPDABPpPB
N	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	12	AASGFTISDYWIH	PPBLBPAAABPBB
N	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	17	GITPAGGYTY	BBPPLLABBB
N	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BBBBAPPaLBPAB
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	9	RASQDVSTAVA	BPABPDGDPBB
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	10	YSASFLYS	BLLDPPPP
O	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQSYTTPPT	BPDABPpPB
P	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	12	AASGFTISDYWIH	PPBLBBAAABPBB
P	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	12	GITPAGGYTY	BBPPLLABBB
P	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BPBBAPPaLBPAB
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	8	RASQDVSTAVA	BPABPDGDPBB
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	7	YSASFLYS	BLLDBPPP
Q	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQSYTTPPT	BBDABBpPB
R	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	11	AASGFTISDYWIH	PPBLBBAAABPBB
R	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	13	GITPAGGYTY	BBPPLLABBB
R	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BPBBAPPaLBPAB
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	11	RASQDVSTAVA	BPABPDGDPBB
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	9	YSASFLYS	BLLDPPPP
S	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	8	QQSYTTPPT	BPDABBpPB
T	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	10	AASGFTISDYWIH	PBBLBPAAABPBB
T	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	15	GITPAGGYTY	BBPPLLABBB
T	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BPBBAPPaLBPAB
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	8	RASQDVSTAVA	BPABPDGDPBB
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	8	YSASFLYS	BLLDBPPP
U	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQSYTTPPT	BBDABPpPB
V	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	12	AASGFTISDYWIH	PPBLBBAAABPBB
V	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	15	GITPAGGYTY	BBPPLLABBB
V	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BPBBAPPaLBPAB
W	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	7	RASQDVSTAVA	BPABPDGDPBB
W	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV6-17*01	62.5	L2	8	L2-8-1	7	YSASFLYS	BLLDBPPP
W	kappa	Homo.sapiens	Hu_IGKV1D-39*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	10	QQSYTTPPT	BPDABBpPB
X	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	61.5	H1	13	H1-13-1	12	AASGFTISDYWIH	PPBLBBAAABPBB
X	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV3-64*04	50	H2	10	H2-10-4	15	GITPAGGYTY	BBPPLLABBB
X	heavy	Homo.sapiens	Hu_IGHV3-64*04	91.8	Hu_IGHV	-1	H3	13	H3-13-cis8-*	-1	ARFVFFLPYAMDY	BPBBAPPaLBPAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019