PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 1XCQ

#CDRs = 6; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV8-21*01	100	L1	17	L1-17-1	34	KSSQSLLNSRTRKNYLA	BPDBGDPPAADLBPAPB
A	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV8-21*01	100	L2	8	L2-8-1	21	YWASTRES	BLLDPBPP
A	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	17	KQAYIPPLT	BBDABPpPB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	27	KASGYTFTDFSMH	PBBLBPAPDBPBB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	90	H2	10	H2-10-1	32	WVNTETGEPT	BBPADALBBB
B	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV	-1	H3	11	H3-11-*	-1	ARFLLRQYFDV	BPBPAALBBAB
C	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV8-21*01	100	L1	17	L1-17-*	-1	KSSQSLLNSRTRKNYLA	PBDABAPBAALLPBPBB
C	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV8-21*01	100	L2	8	L2-8-1	19	YWASTRES	BLGDPPPP
C	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	22	KQAYIPPLT	PBDABPpPB
D	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-7	35	KASGYTFTDFSMH	BPBLBPDDBBBBB
D	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	90	H2	10	H2-10-1	35	WVNTETGEPT	BBPAADLPPB
D	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV	-1	H3	11	H3-11-*	-1	ARFLLRQYFDV	BPBPADLBBDB
E	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV8-21*01	100	L1	17	L1-17-1	28	KSSQSLLNSRTRKNYLA	BPDBGDPPAAALBPPBB
E	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV8-21*01	100	L2	8	L2-8-1	16	YWASTRES	BLLDPPBP
E	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	19	KQAYIPPLT	PBDABPpPB
F	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	27	KASGYTFTDFSMH	BBBLBPAAABPBB
F	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	90	H2	10	H2-10-1	38	WVNTETGEPT	BBPAAALPPP
F	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV	-1	H3	11	H3-11-*	-1	ARFLLRQYFDV	BPBPAALBBAB
G	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV8-21*01	100	L1	17	L1-17-1	37	KSSQSLLNSRTRKNYLA	BPDBPDBBADDLBBAPB
G	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV8-21*01	100	L2	8	L2-8-1	38	YWASTRES	BLLBBPPP
G	kappa	Mus.musculus	Mo_IGKV8-21*01	95.7	Mo_IGKV	-1	L3	9	L3-9-cis7-1	28	KQAYIPPLT	BBDABPpPP
H	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	25	KASGYTFTDFSMH	PPBGBPAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV9-2-1*01	90	H2	10	H2-10-*	-1	WVNTETGEPT	BBLAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-2-1*01	95.9	Mo_IGHV	-1	H3	11	H3-11-*	-1	ARFLLRQYFDV	PPPPADLBPDB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019