PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 1UZ6

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV2-109*01	93.8	L1	16	L1-16-1	9	RSSKSLLYSNGITYLY	BBABPAPPAALPPPBB
E	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV2-109*01	100	L2	8	L2-8-1	13	YQMSNLAS	BLGDBPPP
E	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	16	AQNLEVPWT	BBBABPpPB
F	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	92.3	H1	13	H1-13-1	10	AASGFDFSGYWMS	PPBLBPAADBPBB
F	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	100	H2	10	H2-10-2	14	EINPDSSTIN	BBPAALABBB
F	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV	-1	H3	10	H3-10-*	-1	ARETGTRFDY	BPLPLBAAPB
H	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	92.3	H1	13	H1-13-1	9	AASGFDFSGYWMS	PPBLBPAADBPBB
H	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	100	H2	10	H2-10-2	12	EINPDSSTIN	BBPADLABBB
H	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV	-1	H3	10	H3-10-*	-1	ARETGTRFDY	BPLPLBAAPB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV2-109*01	93.8	L1	16	L1-16-1	10	RSSKSLLYSNGITYLY	BBABPAPPAALPBPBB
L	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV2-109*01	100	L2	8	L2-8-1	9	YQMSNLAS	BLGDBPPP
L	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	12	AQNLEVPWT	BBDABPpPB
M	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV2-109*01	93.8	L1	16	L1-16-1	9	RSSKSLLYSNGITYLY	BBABPAPPAALPBPBB
M	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV2-109*01	100	L2	8	L2-8-1	11	YQMSNLAS	BLGDBPPP
M	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	13	AQNLEVPWT	BBDABPpPB
P	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	92.3	H1	13	H1-13-1	10	AASGFDFSGYWMS	BBBLBPAAABPBB
P	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	100	H2	10	H2-10-2	15	EINPDSSTIN	BBPAALABBB
P	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV	-1	H3	10	H3-10-*	-1	ARETGTRFDY	BPLPLBAAPB
V	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV2-109*01	93.8	L1	16	L1-16-1	10	RSSKSLLYSNGITYLY	BBABPDPPAALPBPBB
V	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV2-109*01	100	L2	8	L2-8-1	10	YQMSNLAS	BLGDBPPP
V	kappa	Mus.musculus	Mo_IGKV2-109*01	100	Mo_IGKV	-1	L3	9	L3-9-cis7-1	15	AQNLEVPWT	BBDABPpPB
W	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	92.3	H1	13	H1-13-1	9	AASGFDFSGYWMS	PPBLBPAADBPBB
W	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV4-1*02	100	H2	10	H2-10-2	15	EINPDSSTIN	BBPAALABBB
W	heavy	Mus.musculus	Mo_IGHV4-1*02	98.6	Mo_IGHV	-1	H3	10	H3-10-*	-1	ARETGTRFDY	BBLPLBAAPB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019