PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 1NJ9

#CDRs = 6; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Mus.musculus	Mo_IGLV1*01	95.6	Mo_IGLV1*01	71.4	L1	14	L1-14-1	12	RSSTGTITSDNYAN	BPAAGPPBAAALPB
A	lambda	Mus.musculus	Mo_IGLV1*01	95.6	Mo_IGLV1*01	50	L2	8	L2-8-*	-1	GVNNARPP	BLLDPPBA
A	lambda	Mus.musculus	Mo_IGLV1*01	95.6	Mo_IGLV	-1	L3	9	L3-9-1	38	ALWYSNHWV	BBBBPLBBB
B	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	100	H1	13	H1-13-1	12	KASGYSFTDYNMY	PBBLBPAAABPBB
B	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	70	H2	10	H2-10-1	14	YIDPSNGDTF	BBBAADLPBB
B	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV	-1	H3	9	H3-9-2	39	ARGGGLFAF	BBPGABPAB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	100	H1	13	H1-13-1	11	KASGYSFTDYNMY	PBBLBPAAABPBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV1S135*01	70	H2	10	H2-10-1	18	YIDPSNGDTF	BBBAADLPBB
H	heavy	Mus.musculus	Mo_IGHV1S135*01	90.4	Mo_IGHV	-1	H3	9	H3-9-*	-1	ARGGGLFAF	BPPGDBPAP
L	lambda	Mus.musculus	Mo_IGLV1*01	95.6	Mo_IGLV1*01	71.4	L1	14	L1-14-1	10	RSSTGTITSDNYAN	PPAAGPPBAADLPB
L	lambda	Mus.musculus	Mo_IGLV1*01	95.6	Mo_IGLV1*01	50	L2	8	L2-8-*	-1	GVNNARPP	BLLDPAPD
L	lambda	Mus.musculus	Mo_IGLV1*01	95.6	Mo_IGLV	-1	L3	9	L3-9-1	35	ALWYSNHWV	BBBBPLBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019