PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 1KNO

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV9-124*01	100	L1	11	L1-11-2	16	RASQEISGYLS	BPABPDLLAPB
A	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV9-124*01	100	L2	8	L2-8-1	19	YAASTLDS	BLLDPPPP
A	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV	-1	L3	9	L3-9-2	14	LQYASSPYT	BBDABAPPB
B	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100	H1	13	H1-13-1	16	AASGFTFSSFGMH	PBBLBPAADBPPB
B	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100	H2	10	H2-10-2	30	YISSGSSTIY	BBPAALBBBB
B	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGDYYGSRGAY	BPBLAPLAGPBB
C	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV9-124*01	100	L1	11	L1-11-2	17	RASQEISGYLS	BPABPDLLAPB
C	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV9-124*01	100	L2	8	L2-8-1	17	YAASTLDS	BLLDPPPP
C	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV	-1	L3	9	L3-9-2	14	LQYASSPYT	BBDABAPPB
D	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100	H1	13	H1-13-1	15	AASGFTFSSFGMH	PBBLBPAADBPPB
D	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100	H2	10	H2-10-2	28	YISSGSSTIY	BBPAALDBBB
D	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGDYYGSRGAY	BPBLAPGAGPBB
E	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV9-124*01	100	L1	11	L1-11-2	16	RASQEISGYLS	BPABPDLLAPB
E	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV9-124*01	100	L2	8	L2-8-1	15	YAASTLDS	BLLDPPPP
E	kappa	Mus.musculus	Mo_IGKV9-124*01	100	Mo_IGKV	-1	L3	9	L3-9-2	15	LQYASSPYT	BBDABAPPB
F	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100	H1	13	H1-13-1	14	AASGFTFSSFGMH	PBBLBPAADBPPB
F	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100	H2	10	H2-10-2	28	YISSGSSTIY	BBPAALBBBB
F	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV	-1	H3	12	H3-12-*	-1	ARGDYYGSRGAY	BPBLAPLAGPBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019