PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDRs for query 1BFO

#CDRs = 6; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	90.9	L1	11	L1-11-1	13	KASQNIDKYLN	BPDBPDGDPBB
A	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	100	L2	8	L2-8-1	16	YNTNNLQT	BLLDBPPP
A	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV	-1	L3	9	L3-9-cis7-1	13	LQHISRPRT	BPDABPpPB
B	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV7-7*01	92.3	H1	13	H1-13-1	17	AGSGFTFTDFYMN	BBBLBPAAABPBB
B	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV7-7*01	83.3	H2	12	H2-12-1	14	FIRDKAKGYTTE	BBPPDAALLPBB
B	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV	-1	H3	12	H3-12-cis9-*	-1	AREGHTAAPFDY	BPAGBGPBpLAB
C	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	90.9	L1	11	L1-11-1	17	KASQNIDKYLN	BBDBPAGAPBB
C	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	100	L2	8	L2-8-1	17	YNTNNLQT	BLLDBPPP
C	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV	-1	L3	9	L3-9-cis7-1	13	LQHISRPRT	BPDABPpPB
D	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV7-7*01	92.3	H1	13	H1-13-1	18	AGSGFTFTDFYMN	BBBLBPAAABPBB
D	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV7-7*01	83.3	H2	12	H2-12-1	13	FIRDKAKGYTTE	BBPPDAALLPBB
D	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV	-1	H3	12	H3-12-cis9-*	-1	AREGHTAAPFDY	BPAGBGPBpLAB
E	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	90.9	L1	11	L1-11-1	11	KASQNIDKYLN	BBABPDGDPBB
E	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	100	L2	8	L2-8-1	17	YNTNNLQT	BLLDBPPP
E	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV	-1	L3	9	L3-9-cis7-1	13	LQHISRPRT	BPDABPpPB
F	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV7-7*01	92.3	H1	13	H1-13-1	16	AGSGFTFTDFYMN	BBBLBPAAABPBB
F	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV7-7*01	83.3	H2	12	H2-12-1	13	FIRDKAKGYTTE	BBPPAAALLPBB
F	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV	-1	H3	12	H3-12-cis9-*	-1	AREGHTAAPFDY	BPAGBGPBpLAB
G	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	90.9	L1	11	L1-11-1	18	KASQNIDKYLN	BBDBPAGDPBB
G	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV22S7*01	100	L2	8	L2-8-1	17	YNTNNLQT	BLLDBPPP
G	kappa	Rattus.rattus	Ra_IGKV22S7*01	94.2	Ra_IGKV	-1	L3	9	L3-9-cis7-1	13	LQHISRPRT	BPDABPpPB
H	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV7-7*01	92.3	H1	13	H1-13-1	17	AGSGFTFTDFYMN	BBBLBPAAABPBB
H	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV7-7*01	83.3	H2	12	H2-12-1	14	FIRDKAKGYTTE	BBPPAAALLPBB
H	heavy	Rattus.rattus	Ra_IGHV7-7*01	100	Ra_IGHV	-1	H3	12	H3-12-cis9-*	-1	AREGHTAAPFDY	BPAGBGPBpLAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019