PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDR Structures for L3-8-2

Summary info for L3-8-2
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
L3-8-2	17	7.00	1KEGL	qqslsspt	13	10.66	Hu Mo	kappa lambda	BPDPGPPB	31

Structures in cluster L3-8-2
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
L3-8-2	1A7OL	2	kappa	Mus.musculus	Mo_IGKV12-41*01	95.7	Mo_IGKV	-1	QHFWSTPT	BBDBGPPB	33
L3-8-2	1BQLL	2.6	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV	-1	QQWGRNPT	BPPPABPB	35
L3-8-2	1EHLL	2.4	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV	-1	FQGSLVPT	BPAPABPB	31
L3-8-2	1KEGL	2.4	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV	-1	FQGSLVPT	BBABGBPB	0
L3-8-2	1YQVL	1.7	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV	-1	QQWGRNPT	BBBPABPB	36
L3-8-2	2IFFL	2.65	kappa	Mus.musculus	Mo_IGKV4-59*01	95.7	Mo_IGKV	-1	QQWGRNPT	BPBPABPB	38
L3-8-2	3DGGC	2.3	kappa	Homo.sapiens	Mo_IGKV3-12*01	100	Mo_IGKV	-1	QHSRELLT	BBABGBPB	16
L3-8-2	3VW3L	2.5	kappa	Mus.musculus	Mo_IGKV1-117*01	100	Mo_IGKV	-1	FRGSHVPT	BPABGBPB	14
L3-8-2	3W9DB	2.32	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV	-1	QQYGSSPT	BBDPABPB	36
L3-8-2	3W9DD	2.32	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV	-1	QQYGSSPT	BBDPABPB	37
L3-8-2	3W9EB	2.3	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV	-1	QQYGSSPT	BBDPABPB	38
L3-8-2	4HFWA	2.601	kappa	Homo.sapiens	Hu_IGKV1D-39*01	92.8	Hu_IGKV	-1	QKTLRTWT	BPDBGPPP	32
L3-8-2	4HFWL	2.601	kappa	Homo.sapiens	Hu_IGKV1D-39*01	92.8	Hu_IGKV	-1	QKTLRTWT	BPDBGPPP	32
L3-8-2	4J1UE	2.58	kappa	Mus.musculus	Mo_IGKV8-21*01	97.1	Mo_IGKV	-1	KQSYDLPT	BPDPGPPB	37
L3-8-2	6C6ZL	2.1	kappa	Homo.sapiens	Hu_IGKV2D-28*01	98.5	Hu_IGKV	-1	MQALQTPA	BPDPGPPB	23
L3-8-2	6CA9A	2.702	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV	-1	QQSARSFT	BBDPGBPB	28
L3-8-2	6CA9C	2.702	kappa	Homo.sapiens	Hu_IGKV3-20*01	100	Hu_IGKV	-1	QQSARSFT	BBDPGBPB	28
L3-8-2	6D2PL	2.6	lambda	Homo.sapiens	Hu_IGLV2-23*01	100	Hu_IGLV	-1	CSYAGSVV	BBAPGBPB	28
L3-8-2	6IEBF	2.409	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV	-1	QACDSSTV	BPPBABPB	34
L3-8-2	6IEBL	2.409	lambda	Homo.sapiens	Hu_IGLV3-1*01	100	Hu_IGLV	-1	QACDSSTV	BPPBABPB	32
L3-8-2	6PHGB	2	kappa	Homo.sapiens	Hu_IGKV2D-28*01	98.6	Hu_IGKV	-1	MQALQTPT	BPPPABPB	38

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019