PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDR Structures for L3-11-cis7-1

Summary info for L3-11-cis7-1
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
L3-11-cis7-1	27	65.85	2NXYC	QQYNNWPPRYT	2	18.18	Hu	kappa lambda	BBBDPBpPBPB	15

Structures in cluster L3-11-cis7-1
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
L3-11-cis7-1	1G9ML	2.2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	92.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDAPBpPBPB	8
L3-11-cis7-1	1G9NL	2.9	kappa	Homo.sapiens	Hu_IGKV3D-15*01	92.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDAPBpPBPB	11
L3-11-cis7-1	1GC1L	2.5	kappa	Homo.sapiens	Hu_IGKV3D-15*01	92.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPDPB	13
L3-11-cis7-1	1RZ8A	2.3	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBBDPBpPBPB	10
L3-11-cis7-1	1RZ8C	2.3	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDDPBpPBPB	7
L3-11-cis7-1	1RZJL	2.2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	6
L3-11-cis7-1	1RZKL	2.9	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDDPBpPBPB	9
L3-11-cis7-1	1YYLL	2.75	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDDPBpPBPB	11
L3-11-cis7-1	1YYLQ	2.75	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDAPBpPBPB	10
L3-11-cis7-1	1YYML	2.2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	6
L3-11-cis7-1	1YYMQ	2.2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	5
L3-11-cis7-1	2I5YL	2.2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDAPBpPBPB	7
L3-11-cis7-1	2I5YQ	2.2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDAPBpPBPB	8
L3-11-cis7-1	2I60L	2.4	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDAPBpPBPB	7
L3-11-cis7-1	2I60Q	2.4	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	9
L3-11-cis7-1	2NXYC	2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	0
L3-11-cis7-1	2NXZC	2.04	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	2
L3-11-cis7-1	2NY0C	2.2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	2
L3-11-cis7-1	2NY1C	1.99	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	3
L3-11-cis7-1	2NY2C	2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	3
L3-11-cis7-1	2NY3C	2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	2
L3-11-cis7-1	2NY4C	2	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	1
L3-11-cis7-1	2NY5L	2.5	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDAPBpPBPB	5
L3-11-cis7-1	2NY6C	2.8	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBBDPBpPBPB	9
L3-11-cis7-1	3WSQL	3.5	lambda	Homo.sapiens	Hu_IGLV1-51*01	82.3	Hu_IGLV	-1	TVWDSVPGASV	BPPAPBpBBPB	35
L3-11-cis7-1	4JM2C	3.1	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPB	1
L3-11-cis7-1	4RQSC	4.493	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBAAPBpPBBB	20
L3-11-cis7-1	5A7XC	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDDPBpPBPB	9
L3-11-cis7-1	5A7XG	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDDPBpPBPB	9
L3-11-cis7-1	5A7XK	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDDPBpPBPB	9
L3-11-cis7-1	5A8HC	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDDPBpPBPB	9
L3-11-cis7-1	5A8HI	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDDPBpPBPB	9
L3-11-cis7-1	5A8HO	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BBDDPBpPBPB	9
L3-11-cis7-1	5THRJ	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDDPBpPDPP	19
L3-11-cis7-1	5THRK	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDDPBpPDPP	19
L3-11-cis7-1	5THRL	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDDPBpPDPP	19
L3-11-cis7-1	5VN3L	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	92.7	Hu_IGKV	-1	QQYNNWPPRYT	BPBDBBpPDPD	36
L3-11-cis7-1	5VN3N	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	92.7	Hu_IGKV	-1	QQYNNWPPRYT	BPBDBBpPDPD	36
L3-11-cis7-1	5VN3O	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	92.7	Hu_IGKV	-1	QQYNNWPPRYT	BPBDBBpPDPD	36
L3-11-cis7-1	6CM3J	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPP	21
L3-11-cis7-1	6CM3L	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPP	21
L3-11-cis7-1	6CM3N	EM	kappa	Homo.sapiens	Hu_IGKV3D-15*01	95.7	Hu_IGKV	-1	QQYNNWPPRYT	BPDAPBpPBPP	21

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