PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDR Structures for L3-10-1

Summary info for L3-10-1
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
L3-10-1	52	22.13	3B5GB	qsydss-tvv	26	24.07	Hu Ma	kappa lambda	BBPBAALBBB	23

Structures in cluster L3-10-1
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
L3-10-1	1AQKL	1.84	lambda	Homo.sapiens	Hu_IGLV1-40*01	97.1	Hu_IGLV	-1	QSYDSSLSAR	BBBBADLBPB	23
L3-10-1	1LILB	2.65	lambda	Homo.sapiens	Hu_IGLV3-1*01	88.1	Hu_IGLV	-1	QVWDSNASVV	BBBPAALPBB	35
L3-10-1	2FL5A	3	lambda	Homo.sapiens	Hu_IGLV3-10*01	91	Hu_IGLV	-1	YSDISNGYPL	BBBPADLPPB	25
L3-10-1	2FL5C	3	lambda	Homo.sapiens	Hu_IGLV3-10*01	91	Hu_IGLV	-1	YSDISNGYPL	BBBPABLPPB	27
L3-10-1	2FL5E	3	lambda	Homo.sapiens	Hu_IGLV3-10*01	91	Hu_IGLV	-1	YSDISNGYPL	BBBPADLPPB	28
L3-10-1	2FL5L	3	lambda	Homo.sapiens	Hu_IGLV3-10*01	91	Hu_IGLV	-1	YSDISNGYPL	BBBPABLPPB	29
L3-10-1	2MKWA	NMR	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALBPB	18
L3-10-1	2W0KA	2.35	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	5
L3-10-1	2W0KB	2.35	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	13
L3-10-1	2W0LA	2.2	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV	-1	QSYDSSNHVV	BBBPDAGBPB	36
L3-10-1	2XZAL	1.5	lambda	Homo.sapiens	Hu_IGLV1-51*01	100	Hu_IGLV	-1	GTWDSSLNPV	BBBPAALPPB	12
L3-10-1	2XZCL	1.36	lambda	Homo.sapiens	Hu_IGLV1-51*01	100	Hu_IGLV	-1	GTWDSSLNPV	BBBPAALPPB	12
L3-10-1	3B5GA	1.9	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	6
L3-10-1	3B5GB	1.9	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	0
L3-10-1	3BDXA	2.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV	-1	QSYDSSNHVV	BBBBAALPPB	13
L3-10-1	3BDXB	2.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV	-1	QSYDSSNHVV	BBBBAALPPB	14
L3-10-1	3BDXC	2.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV	-1	QSYDSSNHVV	BBBBAALPBB	11
L3-10-1	3GO1L	1.89	lambda	Homo.sapiens	Hu_IGLV3-25*01	89.7	Hu_IGLV	-1	QSADSSGDYV	BBBBAALPPB	16
L3-10-1	3LRSB	2.37	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.2	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLBBB	25
L3-10-1	3LRSD	2.37	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.2	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLBBB	27
L3-10-1	3LRSF	2.37	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.2	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLBBB	28
L3-10-1	3LRSL	2.37	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.2	Hu_IGLV	-1	SSLTDRSHRI	BBPBAALPBB	24
L3-10-1	3MLXL	1.9	lambda	Homo.sapiens	Hu_IGLV1-51*01	94	Hu_IGLV	-1	ATWDGSLRTV	BBPBAALBPB	29
L3-10-1	3MLXM	1.9	lambda	Homo.sapiens	Hu_IGLV1-51*01	94	Hu_IGLV	-1	ATWDGSLRTV	BBPBAALBPB	29
L3-10-1	3MLYL	1.7	lambda	Homo.sapiens	Hu_IGLV1-51*01	94.1	Hu_IGLV	-1	ATWDGSLRTV	BBPBAALBPB	27
L3-10-1	3MLYM	1.7	lambda	Homo.sapiens	Hu_IGLV1-51*01	94.1	Hu_IGLV	-1	ATWDGSLRTV	BBPBAALBPB	26
L3-10-1	3MLZL	2.99	lambda	Homo.sapiens	Hu_IGLV1-51*01	94.1	Hu_IGLV	-1	ATWDGSLRTV	BBPBAALBPB	28
L3-10-1	3MMEB	3.97	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLPBB	25
L3-10-1	3MMED	3.97	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLBBB	25
L3-10-1	3MMEL	3.97	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLBBB	24
L3-10-1	3MUGA	2.49	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLPBB	24
L3-10-1	3MUGC	2.49	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLPBB	23
L3-10-1	3MUGE	2.49	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLPBB	22
L3-10-1	3MUGG	2.49	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLPBB	23
L3-10-1	3MUGI	2.49	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLPBB	23
L3-10-1	3MUGK	2.49	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLPBB	23
L3-10-1	3TNMB	1.85	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV	-1	SSYTDIHNFV	BBPBAALBBB	33
L3-10-1	3TNML	1.85	lambda	Homo.sapiens	Hu_IGLV2-8*01	94.1	Hu_IGLV	-1	SSYTDIHNFV	BBPBAALBBB	29
L3-10-1	3U2SB	1.797	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBADLPBB	24
L3-10-1	3U2SL	1.797	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBADLPBB	25
L3-10-1	3U36B	3.281	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	24
L3-10-1	3U36D	3.281	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	23
L3-10-1	3U36F	3.281	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	23
L3-10-1	3U36L	3.281	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	23
L3-10-1	3U4EB	2.185	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	25
L3-10-1	3U4EL	2.185	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	25
L3-10-1	3WLWD	3.088	lambda	Homo.sapiens	Hu_IGLV2-23*01	100	Hu_IGLV	-1	SSYTSSSTLV	BBPBADLBPB	26
L3-10-1	3WLWL	3.088	lambda	Homo.sapiens	Hu_IGLV2-23*01	100	Hu_IGLV	-1	SSYTSSSTLV	BBPBAALBPB	32
L3-10-1	3ZL4L	1.95	lambda	Homo.sapiens	Hu_IGLV1-51*01	100	Hu_IGLV	-1	GTWDSSLNPV	BBPPAALBPB	16
L3-10-1	4DQOL	2.438	lambda	Homo.sapiens	Hu_IGLV2-23*01	86.8	Hu_IGLV	-1	SSLTDRSHRI	BBPBADLPBB	26
L3-10-1	4F57L	1.7	lambda	Homo.sapiens	Hu_IGLV2-23*01	91.2	Hu_IGLV	-1	AAYTVASTLL	BBPBAALBBB	25
L3-10-1	4F58L	2.488	lambda	Homo.sapiens	Hu_IGLV2-23*01	94.1	Hu_IGLV	-1	AAYTVASTLL	BBPBAALBBB	24
L3-10-1	4F58M	2.488	lambda	Homo.sapiens	Hu_IGLV2-23*01	94.1	Hu_IGLV	-1	AAYTVASTLL	BBPBAALBBB	24
L3-10-1	4F58N	2.488	lambda	Homo.sapiens	Hu_IGLV2-23*01	94.1	Hu_IGLV	-1	AAYTVASTLL	BBPBAALBBB	24
L3-10-1	4F58O	2.488	lambda	Homo.sapiens	Hu_IGLV2-23*01	94.1	Hu_IGLV	-1	AAYTVASTLL	BBPBAALBBB	25
L3-10-1	4NKIL	2.41	lambda	Homo.sapiens	Hu_IGLV2-14*01	100	Hu_IGLV	-1	SSYTSSSTRV	BBPBAALPBB	25
L3-10-1	4UT9L	3.2	lambda	Homo.sapiens	Hu_IGLV2-11*01	91.2	Hu_IGLV	-1	SSHTSRGTWV	BBPPAALBBB	25
L3-10-1	4UT9M	3.2	lambda	Homo.sapiens	Hu_IGLV2-11*01	91.2	Hu_IGLV	-1	SSHTSRGTWV	BBPPAALBBB	25
L3-10-1	4UT9N	3.2	lambda	Homo.sapiens	Hu_IGLV2-11*01	91.2	Hu_IGLV	-1	SSHTSRGTWV	BBPPAALBBB	25
L3-10-1	4UT9O	3.2	lambda	Homo.sapiens	Hu_IGLV2-11*01	91.2	Hu_IGLV	-1	SSHTSRGTWV	BBPPAALBBB	25
L3-10-1	4Y5VB	2.604	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV	-1	NSYTTLSTWL	BBPBAALBBB	26
L3-10-1	4Y5VE	2.604	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV	-1	NSYTTLSTWL	BBPBAALBBB	26
L3-10-1	4Y5VH	2.604	lambda	Homo.sapiens	Hu_IGLV2-11*01	94.1	Hu_IGLV	-1	NSYTTLSTWL	BBPBAALBBB	26
L3-10-1	4YAQB	2.3	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	23
L3-10-1	4YAQL	2.3	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	25
L3-10-1	5ADOL	1.55	lambda	Homo.sapiens	Hu_IGLV1-51*01	100	Hu_IGLV	-1	GTWDSSLNPV	BBBPAALBPB	12
L3-10-1	5ADPL	2.13	lambda	Homo.sapiens	Hu_IGLV1-51*01	100	Hu_IGLV	-1	GTWDSSLNPV	BBBPAALBPB	14
L3-10-1	5BJZH	1.95	kappa	Homo.sapiens	Hu_IGKV1D-12*01	97.1	Hu_IGKV	-1	QQASLTALLT	BBBPAALBBB	22
L3-10-1	5BJZL	1.95	kappa	Homo.sapiens	Hu_IGKV1D-12*01	97.1	Hu_IGKV	-1	QQASLTALLT	BBBPAALBBB	22
L3-10-1	5C2BL	1.405	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	SSYTRRDTYV	BBPBAALBBB	28
L3-10-1	5C6WH	1.54	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	ASATLLDTYV	BBPBAALBBB	29
L3-10-1	5C6WJ	1.54	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	ASATLLDTYV	BBPBAALBBB	28
L3-10-1	5C9KA	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	7
L3-10-1	5C9KB	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	7
L3-10-1	5C9KC	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	7
L3-10-1	5C9KD	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	9
L3-10-1	5C9KE	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	7
L3-10-1	5C9KF	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	9
L3-10-1	5C9KG	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	7
L3-10-1	5C9KH	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	7
L3-10-1	5CBAB	2.5	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	SSYTRRDTYV	BBPBAALBBB	28
L3-10-1	5CBAD	2.5	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	SSYTRRDTYV	BBPBAALBBB	27
L3-10-1	5CBEB	2.4	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	ASATLLDTYV	BBPBAALBBB	28
L3-10-1	5CBED	2.4	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	ASATLLDTYV	BBPBAALBBB	29
L3-10-1	5F6HL	2.66	lambda	Macaca.mulatta	Ma_IGLV2S9*01	94.1	Ma_IGLV	-1	CSYRTGATYI	BBPBAALBBB	25
L3-10-1	5F6HN	2.66	lambda	Macaca.mulatta	Ma_IGLV2S9*01	94.1	Ma_IGLV	-1	CSYRTGATYI	BBPBAALPBB	32
L3-10-1	5GRJL	3.206	lambda	Homo.sapiens	Hu_IGLV2-14*01	100	Hu_IGLV	-1	SSYTSSSTRV	BBPBAALBBP	29
L3-10-1	5H37H	EM	lambda	Homo.sapiens	Hu_IGLV2-11*01	90.9	Hu_IGLV	-1	SSHTSRGTWV	BBPPAALBBB	22
L3-10-1	5H37L	EM	lambda	Homo.sapiens	Hu_IGLV2-11*01	90.9	Hu_IGLV	-1	SSHTSRGTWV	BBPPAALBBB	23
L3-10-1	5H37M	EM	lambda	Homo.sapiens	Hu_IGLV2-11*01	90.9	Hu_IGLV	-1	SSHTSRGTWV	BBPPAALBPB	25
L3-10-1	5IR3A	1.7	lambda	Homo.sapiens	Hu_IGLV6-57*01	92.9	Hu_IGLV	-1	QSYNSNHHVV	BBBPAALPPB	7
L3-10-1	5JPJA	2	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPAALPPB	10
L3-10-1	5JPJB	2	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV	-1	QSYDSSNHVV	BBBPADLBPB	13
L3-10-1	5TJDL	2.1	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV	-1	GTWDSSLNPV	BBBPADLPPB	13
L3-10-1	5TPLL	2.5	lambda	Homo.sapiens	Hu_IGLV2-23*01	90.9	Hu_IGLV	-1	SSSTNSATVI	BBPBAALBBB	26
L3-10-1	5VJ6L	EM	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	KSLTSTRRRV	BBPBAALPBB	23
L3-10-1	5WCAL	1.369	lambda	Homo.sapiens	Hu_IGLV2-23*01	95.6	Hu_IGLV	-1	CSSTSSTTVV	BBPBAALPBB	25
L3-10-1	6B08B	2.2	lambda	Homo.sapiens	Hu_IGLV3-21*01	95.6	Hu_IGLV	-1	QVWDSDRYWV	BBPBAALBPB	28
L3-10-1	6CBJL	2.85	lambda	Homo.sapiens	Hu_IGLV2-23*01	90.9	Hu_IGLV	-1	SSSTNSATVI	BBPBAALBBB	24
L3-10-1	6GV4L	EM	kappa	Homo.sapiens	Hu_IGKV1-5*01	97.1	Hu_IGKV	-1	QQYNNYMALT	PBBBAALBPB	31
L3-10-1	6IUTL	2.3	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.2	Hu_IGLV	-1	SSYTSSNTWV	BBPBAALBBB	29
L3-10-1	6PHBA	2	kappa	Homo.sapiens	Hu_IGKV1D-33*01	100	Hu_IGKV	-1	QQYDNLRIFT	BBBPAALBPB	18
L3-10-1	6PHBC	2	kappa	Homo.sapiens	Hu_IGKV1D-33*01	100	Hu_IGKV	-1	QQYDNLRIFT	BBBPAALBPB	18

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019