PyIgClassify: An antibody CDRs clusters web site

FCCC

Clusters of Antibody CDR Loop Conformations

Dunbrack Lab

CDR Structures for L1-15-2

Summary info for L1-15-2
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
L1-15-2	6	3.21	1I7ZA	RASKSVSsSgnnYMH	6	6.12	Mo	kappa	BPABPDPPADBBPBB	31

Structures in cluster L1-15-2
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
L1-15-2	1I7ZA	2.3	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV3-12*01	98.5	Mo_IGKV3-12*01	93.3	RASKSVSTSGYNYMH	BPABPDDAALBPPBB	0
L1-15-2	1I9RL	3.1	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Mo_IGKV3-7*01	80	RASQRVSSSTYSYMH	BPABPDBBADBBPBB	34
L1-15-2	1I9RM	3.1	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Mo_IGKV3-7*01	80	RASQRVSSSTYSYMH	BPABPDBBADBBPBB	35
L1-15-2	1I9RY	3.1	kappa	Homo.sapiens	Hu_IGKV3-11*01	88.4	Mo_IGKV3-7*01	80	RASQRVSSSTYSYMH	BPABPDBBADBBPBB	34
L1-15-2	2GSIC	2.81	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	Mo_IGKV3-12*01	80	GASKSVRTSGYSYMD	BPABPBBPPGPBPBB	39
L1-15-2	2GSIE	2.81	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	Mo_IGKV3-12*01	80	GASKSVRTSGYSYMD	BPABPPBDAGPBPBB	33
L1-15-2	2GSIG	2.81	kappa	Mus.musculus	Mo_IGKV3-12*01	94.2	Mo_IGKV3-12*01	80	GASKSVRTSGYSYMD	BPABPPBPPGPBPPB	39
L1-15-2	2R29L	3	kappa	Mus.musculus	Mo_IGKV3-5*01	98.5	Mo_IGKV3-5*01	86.7	RASESVVRYGNSFMH	BPAPPDPAALBPPBB	34
L1-15-2	3DGGA	2.3	kappa	Homo.sapiens	Mo_IGKV3-12*01	100	Mo_IGKV3-12*01	100	RASKSVSTSGYSYMH	BBABPDDAAGPPPBB	19
L1-15-2	3DGGC	2.3	kappa	Homo.sapiens	Mo_IGKV3-12*01	100	Mo_IGKV3-12*01	100	RASKSVSTSGYSYMH	BPABPDDADBPPPBB	17
L1-15-2	3PHQA	2	kappa	Mus.musculus	Mo_IGKV3-12*01	100	Mo_IGKV3-12*01	80	RASKSVSSSVNSYMH	BPABPDPPADBBPBB	35

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019

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