PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDR Structures for L1-13-2

Summary info for L1-13-2
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
L1-13-2	40	17.39	3B5GB	tRSsGniasnYVq	12	12.24	Hu Mo Ra	lambda	BPABGPAAABPBB	14

Structures in cluster L1-13-2
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
L1-13-2	1CD0A	1.9	lambda	Homo.sapiens	Hu_IGLV6-57*01	92.9	Hu_IGLV6-57*01	84.6	TRSSGNIDSNYVQ	BPABGPAAABPBB	11
L1-13-2	1CD0B	1.9	lambda	Homo.sapiens	Hu_IGLV6-57*01	92.9	Hu_IGLV6-57*01	84.6	TRSSGNIDSNYVQ	PPABGPAAABPBB	9
L1-13-2	1PEWA	1.6	lambda	Homo.sapiens	Hu_IGLV6-57*01	90	Hu_IGLV6-57*01	92.3	TRSSGNIASNYVQ	PPABGBAAABPBB	7
L1-13-2	1PEWB	1.6	lambda	Homo.sapiens	Hu_IGLV6-57*01	90	Hu_IGLV6-57*01	92.3	TRSSGNIASNYVQ	BPABGPAAABPBB	8
L1-13-2	1PW3A	1.9	lambda	Homo.sapiens	Hu_IGLV6-57*01	94.3	Hu_IGLV6-57*01	84.6	TRSSGNIDSNYVQ	BPABGBAAABPBB	7
L1-13-2	1PW3B	1.9	lambda	Homo.sapiens	Hu_IGLV6-57*01	94.3	Hu_IGLV6-57*01	84.6	TRSSGNIDSNYVQ	BPABGPAAABPBB	6
L1-13-2	2CD0A	1.8	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	84.6	TRSSGSIANNYVH	PPABGPAAABPBB	16
L1-13-2	2CD0B	1.8	lambda	Homo.sapiens	Hu_IGLV6-57*01	95.7	Hu_IGLV6-57*01	84.6	TRSSGSIANNYVH	PBABGPAAABPBB	19
L1-13-2	2MKWA	NMR	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	92.3	TGSSGSIASNYVQ	PBBBBPAAABPBB	39
L1-13-2	2MMXA	NMR	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPADLBDADBPBB	39
L1-13-2	2VXSL	2.63	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	BPABGBAAABPBB	7
L1-13-2	2VXSM	2.63	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	PPABGPAAABPBB	7
L1-13-2	2VXSN	2.63	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	PPABGPAAABPBB	9
L1-13-2	2VXSO	2.63	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	BPABGPAAABPBB	7
L1-13-2	2W0KA	2.35	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGBAAABPBB	12
L1-13-2	2W0KB	2.35	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABPGAAABPBB	39
L1-13-2	2W0LA	2.2	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	5
L1-13-2	2W0LB	2.2	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	8
L1-13-2	2W0LC	2.2	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	6
L1-13-2	2W0LD	2.2	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	6
L1-13-2	3B5GA	1.9	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	7
L1-13-2	3B5GB	1.9	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	0
L1-13-2	3BDXA	2.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	9
L1-13-2	3BDXB	2.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	11
L1-13-2	3BDXC	2.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	PPABGPAAABPBB	12
L1-13-2	3H0TA	1.89	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	92.3	TRSSGSIASYYVQ	PPABGPAAABPBB	11
L1-13-2	4HPOL	1.694	lambda	Homo.sapiens	Hu_IGLV6-57*01	97.1	Hu_IGLV6-57*01	84.6	TRSSGSVASDYVQ	PPABGPAAABPBB	8
L1-13-2	4HQQL	2.4	lambda	Homo.sapiens	Hu_IGLV6-57*01	97.1	Hu_IGLV6-57*01	84.6	TRSSGSVASDYVQ	BPABGBAAABPBB	8
L1-13-2	4RIRB	2.5	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBP	13
L1-13-2	4RIRL	2.5	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	11
L1-13-2	4RISL	2.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	11
L1-13-2	4YNYB	1.584	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100	Ra_IGLV3S2*01	100	KRSTGNIGSNYVN	BPABGPAAABPBB	9
L1-13-2	4YNYD	1.584	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100	Ra_IGLV3S2*01	100	KRSTGNIGSNYVN	BPABGPAAABPBB	7
L1-13-2	4YO0B	1.56	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100	Ra_IGLV3S2*01	100	KRSTGNIGSNYVN	BPABGPAAABPBB	9
L1-13-2	4YO0D	1.56	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100	Ra_IGLV3S2*01	100	KRSTGNIGSNYVN	BPABGPAAABPBB	10
L1-13-2	5C9KF	1.92	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	92.3	TGSSGSIASNYVQ	BPABGBAAABPBB	9
L1-13-2	5HHVL	2.2	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	BPAPGPAAABPBB	23
L1-13-2	5HHXL	3	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	BPPPGPAAABPBB	25
L1-13-2	5HI3D	2.15	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	PPABGPAAABPBB	10
L1-13-2	5HI3L	2.15	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	PPABGPAAABPBB	11
L1-13-2	5HI4D	1.8	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	BPABGPAAABPBB	9
L1-13-2	5HI4L	1.8	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	PPABGPAAABPBB	9
L1-13-2	5HI5D	1.8	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	PPABGPAAABPBB	9
L1-13-2	5HI5L	1.8	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	76.9	TRSSGSLANYYVQ	BPABGPAAABPBB	9
L1-13-2	5UTZC	2.747	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	PPABGPAAABPBB	11
L1-13-2	5UTZG	2.747	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	PPABGPAAABPBB	11
L1-13-2	5UTZK	2.747	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	PPABGPAAABPBB	11
L1-13-2	5UTZL	2.747	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	PPABGPAAABPBB	11
L1-13-2	5XCVB	2.143	lambda	Homo.sapiens	Mo_IGLV8*01	85.5	Mo_IGLV8*01	76.9	KRSTGNIGSNYVN	PPABGPAAABPBB	9
L1-13-2	5XCVE	2.143	lambda	Homo.sapiens	Mo_IGLV8*01	85.5	Mo_IGLV8*01	76.9	KRSTGNIGSNYVN	BPABGBAAABPPB	15
L1-13-2	6AL0L	2.6	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100	Ra_IGLV3S2*01	100	KRSTGNIGSNYVN	BPABGPAAABPBB	10
L1-13-2	6AL1L	3.2	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100	Ra_IGLV3S2*01	100	KRSTGNIGSNYVN	PPABGPAAABPBB	14
L1-13-2	6E62C	2.7	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	92.8	Ra_IGLV3S2*01	92.3	KRSTGNIGSNYVS	PPABGPAAABPBB	14
L1-13-2	6E62L	2.7	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	92.8	Ra_IGLV3S2*01	92.3	KRSTGNIGSNYVS	PPABGPAAABPBB	15
L1-13-2	6E63C	2.6	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	69.2	TRSTGNIGSNYVS	BPABGPAAABPBB	7
L1-13-2	6E63L	2.6	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	69.2	TRSTGNIGSNYVS	PPABGBAAABPBB	8
L1-13-2	6E64B	3.15	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	92.8	Ra_IGLV3S2*01	92.3	KRSTGNIGSNYVS	PBABGPAAABPBB	15
L1-13-2	6E64L	3.15	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	92.8	Ra_IGLV3S2*01	92.3	KRSTGNIGSNYVS	PBABGBAAABPBB	15
L1-13-2	6E65L	1.5	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	69.2	TRSTGNIGSNYVS	BPABGPAAABPBB	9
L1-13-2	6FY3L	2.6	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	92.3	TRSSGSIASDYVQ	PPABGPAAABPBB	8
L1-13-2	6FY3Y	2.6	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	92.3	TRSSGSIASDYVQ	PPABGPAAABPBB	8
L1-13-2	6H5NB	3.23	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	94.2	Ra_IGLV3S2*01	92.3	KRSTGNIGSNYVS	PBABGPAAABPBB	16
L1-13-2	6H5NE	3.23	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	94.2	Ra_IGLV3S2*01	92.3	KRSTGNIGSNYVS	PBABGPAAABPBB	22
L1-13-2	6ICCL	2	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100	Ra_IGLV3S2*01	100	KRSTGNIGSNYVN	BPABGPAAABPBB	8
L1-13-2	6ICFL	4	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100	Ra_IGLV3S2*01	100	KRSTGNIGSNYVN	PPABGPAAABPBB	18
L1-13-2	6II4F	3.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	12
L1-13-2	6II4L	3.3	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	14
L1-13-2	6II8I	3.32	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BBABGPAADBPBB	21
L1-13-2	6II8K	3.32	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	BPABGPAAABPBB	20
L1-13-2	6II8L	3.32	lambda	Homo.sapiens	Hu_IGLV6-57*01	100	Hu_IGLV6-57*01	100	TRSSGSIASNYVQ	PPABGPAAABPBB	15
L1-13-2	6MG4A	1.75	lambda	Homo.sapiens	Hu_IGLV6-57*01	92.9	Hu_IGLV6-57*01	84.6	TRSSGNIDSNYVQ	BPABGPAAABPBB	9
L1-13-2	6MG4B	1.75	lambda	Homo.sapiens	Hu_IGLV6-57*01	92.9	Hu_IGLV6-57*01	84.6	TRSSGNIDSNYVQ	BPABGPAAABPBB	8
L1-13-2	6MG5A	1.8	lambda	Homo.sapiens	Hu_IGLV6-57*01	92.9	Hu_IGLV6-57*01	84.6	TRSSGNIDSNYVQ	PPABGBAAABPBB	8
L1-13-2	6MG5B	1.8	lambda	Homo.sapiens	Hu_IGLV6-57*01	92.9	Hu_IGLV6-57*01	84.6	TRSSGNIDSNYVQ	BPABGPAAABPBB	7

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019