PyIgClassify: An antibody CDRs clusters web site

FCCC

Clusters of Antibody CDR Loop Conformations

Dunbrack Lab

CDR Structures for H3-7-2

Summary info for H3-7-2
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
H3-7-2	8	7.48	1V7MH	askgfiY	6	12.24	Mo	heavy	BBLLLAB	17

Structures in cluster H3-7-2
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H3-7-2	1GGBH	2.8	heavy	Mus.musculus	Mo_IGHV8-12*01	93.2	Mo_IGHV	-1	VQEGYIY	BPLLLAB	36
H3-7-2	1PSKH	2.8	heavy	Mus.musculus	Mo_IGHV1S113*01	95.9	Mo_IGHV	-1	TSKSFDY	BBLLLAB	13
H3-7-2	1V7MH	2.51	heavy	Mus.musculus	Mo_IGHV6-6*01	98.6	Mo_IGHV	-1	SGWSFLY	BBLLLAB	0
H3-7-2	1V7MI	2.51	heavy	Mus.musculus	Mo_IGHV6-6*01	98.6	Mo_IGHV	-1	SGWSFLY	BBLLLAB	5
H3-7-2	1V7NJ	3.3	heavy	Mus.musculus	Mo_IGHV6-6*01	98.6	Mo_IGHV	-1	SGWSFLY	BBLLLAB	13
H3-7-2	1V7NK	3.3	heavy	Mus.musculus	Mo_IGHV6-6*01	98.6	Mo_IGHV	-1	SGWSFLY	BPLLLAB	10
H3-7-2	2OZ4H	2.7	heavy	Mus.musculus	Mo_IGHV1S113*01	93.2	Mo_IGHV	-1	ATKGFAY	BBLLLAB	14
H3-7-2	2RCSH	2.1	heavy	Homo.sapiens	Mo_IGHV14-3*02	98.6	Mo_IGHV	-1	ASYYGIY	BBLLLAB	20
H3-7-2	2ZKHH	2.04	heavy	Homo.sapiens	Mo_IGHV6-6*01	98.6	Mo_IGHV	-1	SGWSFLY	BBLLLAB	8
H3-7-2	4R0LA	3.3	heavy	Mus.musculus	Mo_IGHV9-1*03	97.3	Mo_IGHV	-1	ASLGEDF	BBLLLAB	20
H3-7-2	4R0LH	3.3	heavy	Mus.musculus	Mo_IGHV9-1*03	97.3	Mo_IGHV	-1	ASLGEDF	BBLLLAB	19

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019

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