PyIgClassify: An antibody CDRs clusters web site

FCCC

Clusters of Antibody CDR Loop Conformations

Dunbrack Lab

CDR Structures for H2-9-2

Summary info for H2-9-2
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
H2-9-2	11	1.20	1JGUH	sIrhgfiih	3	0.77	Al Mo	heavy	BBBLLDBBB	19

Structures in cluster H2-9-2
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H2-9-2	1JGUH	1.8	heavy	Mus.musculus	Mo_IGHV5-6-5*01	89	Mo_IGHV5-6-5*01	33.3	SIYNGFRIH	BBBLLDPBB	0
H2-9-2	1JGVH	1.85	heavy	Mus.musculus	Mo_IGHV5-6-5*01	89	Mo_IGHV5-6-5*01	33.3	SIYNGFRIH	BBBLLDBBB	19
H2-9-2	2AJSH	1.7	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	44.4	YIRSSVITR	BBBLLDBBB	21
H2-9-2	2AJUH	1.5	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	44.4	YIRSSVITR	BBBLLDBBB	20
H2-9-2	2AJVH	1.5	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	44.4	YIRSSVITR	BBBLLDBBB	22
H2-9-2	2AJXH	1.85	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	44.4	YIRSSVITR	BBBLLDBBB	18
H2-9-2	2AJYH	2.1	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	44.4	YIRSSVITR	BBBLLDBBB	21
H2-9-2	2AJZB	2.3	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	44.4	YIRSSVITR	BBBLLDBBB	16
H2-9-2	2AJZH	2.3	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	44.4	YIRSSVITR	BBBLLDBBB	20
H2-9-2	2AK1H	1.85	heavy	Mus.musculus	Mo_IGHV3-1*02	93.2	Mo_IGHV3-1*02	44.4	YIRSSVITR	BBBLLDBBB	21
H2-9-2	5VNVA	1.4	heavy	Synthetic.construct	Al_IGHV3S57*01_VHH	94.5	Al_IGHV3S57*01_VHH	44.4	TITHGTNTY	BBBLLDPBB	19
H2-9-2	5VNWD	2.6	heavy	Synthetic.construct	Al_IGHV3S57*01_VHH	94.5	Al_IGHV3S57*01_VHH	44.4	TITHGTNTY	BBBLLDPBB	24

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019

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