PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDR Structures for H2-11-*

Structures in cluster H2-11-*
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H2-11-*	2X6MA	1.62	heavy	Camelus.dromedarius	Ca_IGHV1S47*01_VHH	91.5	CDRLenMismatch	-1	RINGLGGVKTA	BBPPLLPDPBB	-1
H2-11-*	3H0TB	1.89	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSKWFND	BBBBBLBPBBB	-1
H2-11-*	3ULSB	2.495	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	IIQKRSKWYNN	BBBPBABPBBB	-1
H2-11-*	3ULSH	2.495	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	IIQKRSKWYNN	BBBBPABPBBB	-1
H2-11-*	3ULUD	3.52	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	IIQKRSKWYNN	BBBBDDBPBBB	-1
H2-11-*	3ULVD	3.522	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	IIQKRSKWYNN	BBBBDDPBBBB	-1
H2-11-*	4J4PC	2.91	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100	RTYYRSKWYND	BBBBDDBPBBB	-1
H2-11-*	4J4PH	2.91	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	100	RTYYRSKWYND	BBBBPABPBBB	-1
H2-11-*	4JO1H	2.033	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	92.8	Rb_IGHV1S45*01	54.5	CIETGSSDSAA	BBPAPPLLPPB	-1
H2-11-*	4JO1I	2.033	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	92.8	Rb_IGHV1S45*01	54.5	CIETGSSDSAA	BBPABAALPPB	-1
H2-11-*	4JO2H	2.5	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	92.8	Rb_IGHV1S45*01	54.5	CIETGSSDSAA	BBPBGABDPPB	-1
H2-11-*	4JO2I	2.5	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	92.8	Rb_IGHV1S45*01	54.5	CIETGSSDSAA	BBPBGABDPPB	-1
H2-11-*	4JO3H	2.6	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	36.4	CIYGGGRDIVF	BBPAPAPPBBB	-1
H2-11-*	4JO3I	2.6	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	36.4	CIYGGGRDIVF	BBPAPAPPBBB	-1
H2-11-*	4JO4H	2.27	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	36.4	CIYGGGRDIVF	BBPAPAPPBBB	-1
H2-11-*	4JO4I	2.27	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	95.7	Rb_IGHV1S45*01	36.4	CIYGGGRDIVF	BBPAPAPPBBB	-1
H2-11-*	4P49A	1.4	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	CDRLenMismatch	-1	GISDDGDSYIS	BBPAALDABBB	-1
H2-11-*	4RZCA	2.723	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	89.9	Rb_IGHV1S45*01	54.5	SIGAGVYGSNY	BBPPGAAPPBB	-1
H2-11-*	4RZCC	2.723	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	89.9	Rb_IGHV1S45*01	54.5	SIGAGVYGSNY	BBPPGAAPPBB	-1
H2-11-*	4RZCE	2.723	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	89.9	Rb_IGHV1S45*01	54.5	SIGAGVYGSNY	BBPPGAAPPBB	-1
H2-11-*	4RZCH	2.723	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	89.9	Rb_IGHV1S45*01	54.5	SIGAGVYGSNY	BBPPGAAPPBB	-1
H2-11-*	4ZTOH	2.3	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	36.4	CIVTDITGESY	BBPAPAALPBB	-1
H2-11-*	4ZTOI	2.3	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	36.4	CIVTDITGESY	BBPAPAALPBB	-1
H2-11-*	4ZTPH	1.63	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	91.3	Rb_IGHV1S45*01	36.4	CIVTDITGESY	BBPAPAALPBB	-1
H2-11-*	5GS0D	3.275	heavy	Mus.musculus	Hu_IGHV6-1*01	94.5	Hu_IGHV6-1*01	54.5	IIQKRSKWYNN	BBBBDDBPBBB	-1
H2-11-*	5GS0F	3.275	heavy	Mus.musculus	Hu_IGHV6-1*01	94.5	Hu_IGHV6-1*01	54.5	IIQKRSKWYNN	BBBBDDBPBBB	-1
H2-11-*	5J56B	1.8	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	CDRLenMismatch	-1	SISSSSDGFTS	BBPAPAALPBB	-1
H2-11-*	5JW3H	3.75	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5JW4M	3.7	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5JW4O	3.7	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5JW4Q	3.7	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5JW4S	3.7	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5JW4U	3.7	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5JW4W	3.7	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5JW5A	1.9	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5JW5H	1.9	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	RTYYRSGWYND	BBBBBLGPBBB	-1
H2-11-*	5K9JH	1.904	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	90.9	RTYYRSKWYTD	BBBBBLBPBBB	-1
H2-11-*	5K9KA	2.97	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	90.9	RTYYRSKWYTD	BBBBBLBPBBB	-1
H2-11-*	5K9KH	2.97	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	90.9	RTYYRSKWYTD	BBBBBLBPBBB	-1
H2-11-*	5M63H	2.74	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	97.1	Rb_IGHV1S45*01	36.4	CIRSSSNEILY	BBBAPGPPBBB	-1
H2-11-*	5M63M	2.74	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	97.1	Rb_IGHV1S45*01	36.4	CIRSSSNEILY	BBBAPGPPBBB	-1
H2-11-*	5U4LB	2.5	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	CDRLenMismatch	-1	SISSSSDGFTS	BBPAPAALPBB	-1
H2-11-*	5U4MB	2.5	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	CDRLenMismatch	-1	SISSSSDGFTS	BBPAPAALPBB	-1
H2-11-*	5UELH	1.6	heavy	Homo.sapiens	Hu_IGHV1-46*01	68.5	CDRLenMismatch	-1	LIKVGHGGAAI	BBPPLDLLPBB	-1
H2-11-*	5UEMH	2.7	heavy	Homo.sapiens	Hu_IGHV1-46*01	61.6	CDRLenMismatch	-1	LIKVGHGGGAM	BBPADBLLPBB	-1
H2-11-*	5V6LH	2.549	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	63.6	CIYGGSNDNTY	BBPAPAPPPBB	-1
H2-11-*	5V6LI	2.549	heavy	Oryctolagus.cuniculus	Rb_IGHV1S45*01	90.3	Rb_IGHV1S45*01	63.6	CIYGGSNDNTY	BBPPGAALPBB	-1
H2-11-*	5VK2D	3.201	heavy	Homo.sapiens	Hu_IGHV3-11*01	83.6	CDRLenMismatch	-1	SISSRSGSHIN	BBPPGPPABBB	-1
H2-11-*	5VK2F	3.201	heavy	Homo.sapiens	Hu_IGHV3-11*01	83.6	CDRLenMismatch	-1	SISSRSGSHIN	BBPPGPPABBB	-1
H2-11-*	5VK2H	3.201	heavy	Homo.sapiens	Hu_IGHV3-11*01	83.6	CDRLenMismatch	-1	SISSRSGSHIN	BBPPGPPABBB	-1
H2-11-*	5VXLB	2.8	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	90.4	CDRLenMismatch	-1	SIDSYSGSITN	BBPPGALAPBB	-1
H2-11-*	5YAXA	2.5	heavy	Homo.sapiens	Hu_IGHV6-1*01	100	Hu_IGHV6-1*01	90.9	RTYYRSKWHND	BBBBBLBPBBB	-1
H2-11-*	5YAXB	2.5	heavy	Homo.sapiens	Hu_IGHV6-1*01	100	Hu_IGHV6-1*01	90.9	RTYYRSKWHND	BBBBBLBPBBB	-1
H2-11-*	6GFEH	1.8	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	72.7	RTYYRSHWYYE	BBBBBLBPBBB	-1
H2-11-*	6GFEK	1.8	heavy	Homo.sapiens	Hu_IGHV6-1*01	95.9	Hu_IGHV6-1*01	72.7	RTYYRSHWYYE	BBBBBLBPBBB	-1
H2-11-*	6K7OB	3.004	heavy	Homo.sapiens	Hu_IGHV3-23*03	95.9	CDRLenMismatch	-1	SIFSGDSASTY	BBPAPAALPBB	-1
H2-11-*	6K7OD	3.004	heavy	Homo.sapiens	Hu_IGHV3-23*03	95.9	CDRLenMismatch	-1	SIFSGDSASTY	BBPAPAALPBB	-1
H2-11-*	6K7OF	3.004	heavy	Homo.sapiens	Hu_IGHV3-23*03	95.9	CDRLenMismatch	-1	SIFSGDSASTY	BBPAPAALPBB	-1
H2-11-*	6K7OH	3.004	heavy	Homo.sapiens	Hu_IGHV3-23*03	95.9	CDRLenMismatch	-1	SIFSGDSASTY	BBPAPAALPBB	-1
H2-11-*	6NC2H	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	VIGGGHGQHQS	BBPPGALABBB	-1
H2-11-*	6NC2O	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	VIGGGHGQHQS	BBPPGALABBB	-1
H2-11-*	6NC2P	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	VIGGGHGQHQS	BBPPGALABBB	-1
H2-11-*	6NC2Q	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	VIGGGHGQHQS	BBPPGALABBB	-1
H2-11-*	6NC2R	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	VIGGGHGQHQS	BBPPGALABBB	-1
H2-11-*	6NC2S	EM	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	VIGGGHGQHQS	BBPPGALABBB	-1
H2-11-*	6NCPA	2.76	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	VIGGGHGQHQS	BBPPGPGPBBB	-1
H2-11-*	6NCPC	2.76	heavy	Homo.sapiens	Hu_IGHV3-NL1*01	84.9	CDRLenMismatch	-1	VIGGGHGQHQS	BBPPGALABBB	-1
H2-11-*	6OELH	3.1	heavy	Homo.sapiens	Hu_IGHV6-1*01	94.5	Hu_IGHV6-1*01	100	RTYYRSKWYND	BBBBDDBPBBB	-1
H2-11-*	6OY4D	2.45	heavy	Mus.musculus	Mo_IGHV9-3*01	93.2	CDRLenMismatch	-1	WINPYTGEEPS	BBBAAALPPPB	-1
H2-11-*	6P95D	3.5	heavy	Homo.sapiens	Hu_IGHV3-11*01	90.4	CDRLenMismatch	-1	SISSLSGSHIN	BBPPGPPABBB	-1
H2-11-*	6P95F	3.5	heavy	Homo.sapiens	Hu_IGHV3-11*01	90.4	CDRLenMismatch	-1	SISSLSGSHIN	BBPPGPPABBB	-1
H2-11-*	6P95H	3.5	heavy	Homo.sapiens	Hu_IGHV3-11*01	90.4	CDRLenMismatch	-1	SISSLSGSHIN	BBPPGPPABBB	-1
H2-11-*	6R7TA	2.682	heavy	Lama.glama	La_IGHV1S6*01	90.4	CDRLenMismatch	-1	SINSSGGGIQS	BBPPLLLABBB	-1
H2-11-*	6SGEB	1.5	heavy	Homo.sapiens	Hu_IGHV3-23*01	87.5	CDRLenMismatch	-1	AISRAPGPSQY	BBBAPPGAPBB	-1
H2-11-*	6SGED	1.5	heavy	Homo.sapiens	Hu_IGHV3-23*01	87.5	CDRLenMismatch	-1	AISRAPGPSQY	BBBAPPGAPBB	-1

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019