PyIgClassify: An antibody CDRs clusters web site

FCCC

Clusters of Antibody CDR Loop Conformations

Dunbrack Lab

CDR Structures for H2-10-7

Summary info for H2-10-7
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
H2-10-7	7	0.26	1INDH	nihaGdgdaf	6	0.44	Hu La Mo	heavy	BBPPGPPBBB	31

Structures in cluster H2-10-7
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H2-10-7	1BBJB	3.1	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S53*01	98.6	Mo_IGHV1S53*01	90	YISPGNDDIK	BBPPGPPPBB	36
H2-10-7	1BBJH	3.1	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV1S53*01	98.6	Mo_IGHV1S53*01	90	YISPGNDDIK	BBPPGPPPBB	36
H2-10-7	1INDH	2.2	heavy	Mus.musculus	Mo_IGHV5-9-1*01	84.9	Mo_IGHV5-9-1*01	50	TTLSGGGFTF	BBPPGDPPBB	0
H2-10-7	1INEH	2.8	heavy	Mus.musculus	Mo_IGHV5-9-1*01	84.9	Mo_IGHV5-9-1*01	50	TTLSGGGFTF	BBPPGDPPBB	7
H2-10-7	2J4WH	2.5	heavy	Mus.musculus	Mo_IGHV5-4*02	97.3	Mo_IGHV5-4*02	90	TISDGNSYTY	BBPPGPPBBB	34
H2-10-7	3ZKXC	2.37	heavy	Lama.glama	La_IGHV1S6*01	75.3	La_IGHV1S6*01	10	NINAGDGSAS	BBPPGPPPPB	29
H2-10-7	5IBUG	1.71	heavy	Homo.sapiens	Hu_IGHV5-51*01	87.7	Hu_IGHV5-51*01	60	VIHPGDSDST	BBPPGPPBPB	39
H2-10-7	5W4LB	2.92	heavy	Homo.sapiens	Hu_IGHV1-69*02	89	Hu_IGHV1-69*02	40	RFIPIFNMPD	BBBPGPPBPB	38

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019

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