PyIgClassify: An antibody CDRs clusters web site

Clusters of Antibody CDR Loop Conformations

CDR Structures for H2-10-5

Summary info for H2-10-5
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
H2-10-5	26	1.26	2P45B	aingggggiy	11	1.03	Ca CDRLenMismatch Hu Mf Mo	heavy NA	BBPAALBLPB	16

Structures in cluster H2-10-5
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H2-10-5	1BM3H	2	heavy	Mus.musculus	Mo_IGHV5-9-2*01	94.5	Mo_IGHV5-9-2*01	60	AISGGGTYIH	BBPAALBLBB	25
H2-10-5	1OPGH	2	heavy	Homo.sapiens	Mo_IGHV5-9-2*01	94.5	Mo_IGHV5-9-2*01	60	AISGGGTYIH	BBPADGPLPB	34
H2-10-5	2P42B	1.8	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	91.8	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	5
H2-10-5	2P42D	1.8	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	91.8	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	5
H2-10-5	2P43B	1.65	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	91.8	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	6
H2-10-5	2P44B	1.8	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	89	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	3
H2-10-5	2P45B	1.1	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	89	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	0
H2-10-5	2P46B	2.5	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	89	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	9
H2-10-5	2P46D	2.5	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	89	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	11
H2-10-5	2P47B	2.5	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	89	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	13
H2-10-5	2P48B	2.3	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	89	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPADLBLPB	11
H2-10-5	2P49B	1.38	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	91.8	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	4
H2-10-5	2P4AB	1.9	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	91.8	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	7
H2-10-5	2P4AD	1.9	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	91.8	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	7
H2-10-5	2V7ND	1.92	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	70	SIWYSGSNTY	BBPAALPLPB	20
H2-10-5	2V7NF	1.92	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	70	SIWYSGSNTY	BBPAALPLPB	21
H2-10-5	2V7NH	1.92	heavy	Homo.sapiens	Hu_IGHV3-33*01	95.9	Hu_IGHV3-33*01	70	SIWYSGSNTY	BBPAALPLPB	19
H2-10-5	3QSKB	1.75	heavy	Camelus.dromedarius	Ca_IGHV1S45*01	91.8	Ca_IGHV1S45*01	50	AMDSGGGGTL	BBPAALBLPB	3
H2-10-5	4FNLH	2.297	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FNLI	2.297	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FP8H	2.947	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FP8I	2.947	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FP8J	2.947	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FP8K	2.947	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRa	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRc	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRe	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRg	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRi	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRk	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRm	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRo	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRq	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRs	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRu	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FQRw	4.1	heavy	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	12
H2-10-5	4FZ8H	2.66	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	70	SISNTSTYIY	BBBAALBLPB	22
H2-10-5	4P48A	1.35	heavy	Gallus.gallus	-	-1	-	-1	GIQNDDTGTY	BBPADLPLPB	16
H2-10-5	4RFEC	1.91	heavy	Macaca.mulatta	Mf_IGHV4S11*01	90.4	Mf_IGHV4S11*01	70	HSYGSGGSTN	BBPAAGGLPB	37
H2-10-5	4RFEE	1.91	heavy	Macaca.mulatta	Mf_IGHV4S11*01	90.4	Mf_IGHV4S11*01	70	HSYGSGGSTN	BBPAAGGLPB	39
H2-10-5	5C3LD	2.9	heavy	Camelus.dromedarius	Ca_IGHV1S27*01	94.5	Ca_IGHV1S27*01	40	DIGSGGDRIT	BBPAALPLPB	16
H2-10-5	5GRXH	2.002	heavy	Homo.sapiens	Hu_IGHV3-66*01	97.3	CDRLenMismatch	-1	SIWYSGSNTY	BBPAALPLPB	17
H2-10-5	5NB5H	3	NA	Escherichia.coli	Hu_IGHV3-33*01	75.3	Mo_IGHV1S55*01	70	WISPNGGSTD	BBPADGPGBB	35
H2-10-5	5NB5I	3	NA	Escherichia.coli	Hu_IGHV3-33*01	75.3	Mo_IGHV1S55*01	70	WISPNGGSTD	BBPADGPGBB	35
H2-10-5	5T6PB	1.97	heavy	Mus.musculus	Mo_IGHV5-12-2*01	97.3	Mo_IGHV5-12-2*01	70	YINNGGGNPY	BBPAALBLPB	10
H2-10-5	5T6PD	1.97	heavy	Mus.musculus	Mo_IGHV5-12-2*01	97.3	Mo_IGHV5-12-2*01	70	YINNGGGNPY	BBPAALBLPB	9
H2-10-5	5T78B	2.2	heavy	Mus.musculus	Mo_IGHV5-12-2*01	97.3	Mo_IGHV5-12-2*01	70	YINNGGGNPY	BBPAALBLPB	10
H2-10-5	5T78D	2.2	heavy	Mus.musculus	Mo_IGHV5-12-2*01	97.3	Mo_IGHV5-12-2*01	70	YINNGGGNPY	BBPAALBLPB	10
H2-10-5	5UMNC	1.97	NA	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	13
H2-10-5	5UMNE	1.97	NA	Homo.sapiens	Hu_IGHV3-23*03	86.3	Hu_IGHV3-23*03	30	IINAGGGDID	BBPAALBLPB	13
H2-10-5	5WHJH	2.15	NA	Homo.sapiens	Hu_IGHV3-23*01	100	Hu_IGHV3-23*01	50	SIGSSGGQTK	BBPADLPLPB	13

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on June 28, 2018