PyIgClassify: An antibody CDRs clusters web site

FCCC

Clusters of Antibody CDR Loop Conformations

Dunbrack Lab

CDR Structures for H1-13-11

Summary info for H1-13-11
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
H1-13-11	4	0.12	1UM5H	aASerslrSwafa	2	0.13	La Mo	heavy	BPABPDLPPBBBB	35

Structures in cluster H1-13-11
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H1-13-11	1UM5H	1.6	heavy	Mus.musculus	Mo_IGHV1-14*01	90.3	Mo_IGHV1-14*01	61.5	KASEYTLTSYLFQ	BPABPDLPPBBBB	0
H1-13-11	3QXTB	1.7	heavy	Lama.glama	La_IGHV1S1*01_VHH	90.4	La_IGHV1S1*01_VHH	30.8	AASRRSSRSWAMA	BBABBBAPPBPBB	39
H1-13-11	3QXUC	1.8	heavy	Lama.glama	La_IGHV1S1*01_VHH	90.4	La_IGHV1S1*01_VHH	30.8	AASRRSSRSWAMA	BPABPPAPPPPBB	36
H1-13-11	3QXUD	1.8	heavy	Lama.glama	La_IGHV1S1*01_VHH	90.4	La_IGHV1S1*01_VHH	30.8	AASRRSSRSWAMA	BPABPBAPPBPBB	35
H1-13-11	3QXVA	2.5	heavy	Lama.glama	La_IGHV1S1*01_VHH	89	La_IGHV1S1*01_VHH	30.8	AASRRSSRSWAMA	BBABPBAPPBPBB	38
H1-13-11	3QXVB	2.5	heavy	Lama.glama	La_IGHV1S1*01_VHH	89	La_IGHV1S1*01_VHH	30.8	AASRRSSRSWAMA	BBABPPABPBPBB	39
H1-13-11	3QXVE	2.5	heavy	Lama.glama	La_IGHV1S1*01_VHH	89	La_IGHV1S1*01_VHH	30.8	AASRRSSRSWAMA	BBABPPAPPBPBB	39

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019

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