PyIgClassify: An antibody CDRs clusters web site

FCCC

Clusters of Antibody CDR Loop Conformations

Dunbrack Lab

CDR Structures for H1-13-10

Summary info for H1-13-10
Loop	# of Structures	% of Loop Length	Median PDB	Consensus Sequence	# of Unique Seq	% of Unique Seq	Species	Gene	Loop Conformation	Median Angle	Consensus Sequence Logo
H1-13-10	11	0.32	1RHHB	kASGGTFssyain	7	0.46	Hu La	heavy	PPADLBDADBPBB	26

Structures in cluster H1-13-10
Cluster	PDB	Resolution	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	Sequence	Ramachandran	Distance(°)
H1-13-10	1RHHB	1.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	85.7	Hu_IGHV1-69*01	69.2	KASGGTFSMYGFN	BPAALBAGDPBBB	0
H1-13-10	1RHHD	1.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	85.7	Hu_IGHV1-69*01	69.2	KASGGTFSMYGFN	PPPLLBAGAPBBB	33
H1-13-10	2DD8H	2.3	heavy	Homo.sapiens	Hu_IGHV1-69*02	95.9	Hu_IGHV1-69*02	100	KASGGTFSSYTIS	BPAALBAGDBBBB	18
H1-13-10	2G75A	2.28	heavy	Homo.sapiens	Hu_IGHV1-69*02	95.9	Hu_IGHV1-69*02	100	KASGGTFSSYTIS	BPAALBAGAPBBP	17
H1-13-10	2G75C	2.28	heavy	Homo.sapiens	Hu_IGHV1-69*02	95.9	Hu_IGHV1-69*02	100	KASGGTFSSYTIS	PPAALBDGAPBBB	17
H1-13-10	3NPSB	1.5	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	100	KASGGTFSSYAIS	PPAALBAGABBBB	14
H1-13-10	5ALCH	1.7	heavy	Homo.sapiens	Hu_IGHV1-69*01	87.7	Hu_IGHV1-69*01	76.9	KASGGTFDSYSIH	BPAALBDGDPPBB	11
H1-13-10	5I18H	1.92	heavy	Homo.sapiens	Hu_IGHV1-69*01	100	Hu_IGHV1-69*01	100	KASGGTFSSYAIS	PPPLLBDGAPBBB	36
H1-13-10	5Y9JH	2.05	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	KASGGTFNNNAIN	BPAALBAGAPBBB	13
H1-13-10	5Y9KH	1.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	KASGGTFNNNAIN	BPAALBAGAPBBB	14
H1-13-10	6FXND	2.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	KASGGTFNNNAIN	BPPLLBAGABPBB	33
H1-13-10	6FXNF	2.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	KASGGTFNNNAIN	BPPLLBAGDBBBB	32
H1-13-10	6FXNH	2.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	KASGGTFNNNAIN	PPPLLBAGDBPBB	33
H1-13-10	6FXNM	2.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	KASGGTFNNNAIN	BPPLLBAGAPBBB	32
H1-13-10	6FXNO	2.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	KASGGTFNNNAIN	PPPLLBAGDBBBB	33
H1-13-10	6FXNQ	2.9	heavy	Homo.sapiens	Hu_IGHV1-69*01	90.4	Hu_IGHV1-69*01	69.2	KASGGTFNNNAIN	PPPLLBAGDBBBB	32
H1-13-10	6QKDH	1.9	heavy	Lama.glama	La_IGHV1S3*01	87.7	La_IGHV1S3*01	0	AASGGTFATSPMG	PPADLBDADBPBB	37
H1-13-10	6RCUB	4.005	heavy	Homo.sapiens	Hu_IGHV1-69*01	97.3	Hu_IGHV1-69*01	84.6	KASGGTFSNYAIN	BPDALBPPAPPBB	32

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on November 1, 2019

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