Protein Common Interface Database

Clusters with M>=5,SeqId<90 and pair Pfam Architecture

Pfam Architecture	Cluster#	#CFs/Cluster	#Entries/Cluster	#CFs/Group	#Entries/Group	Minimum Seq Identity	Surface Area	In PDBBA(%)	In PISABA(%)	CFs Cluster/Group(%)
(Hormone_2);(HRM)_(7tm_2)	1	21	21	22	42	4	1561	100	5	95
(14-3-3);(RBD)_(C1_1)_(PK_Tyr_Ser-Thr)	1	5	5	5	5	83	515	100	0	100
(G-alpha);(Phage_lysozyme)_(7tm_1)	1	10	10	10	10	41	1208	100	0	100
(Ras);(RhoGEF)_(PH)	1	7	7	8	8	19	1479	100	100	88
(Gamma-thionin);(GP120)	1	10	17	10	17	70	697	100	41	100
(GATase);(His_biosynth)	1	5	8	5	8	36	1082	88	75	100
(GDNF)_(GDNF);(TGF_beta)	1	7	7	7	7	15	744	100	71	100
(GDNF)_(GDNF)_(GDNF);(RET_CLD1)_(Cadherin)_(RET_CLD3)_(RET_C LD4)	1	5	5	7	7	34	933	100	20	71
(GDNF)_(GDNF)_(GDNF);(TGF_beta)	1	5	5	7	7	42	832	100	40	71
(CI-B14_5a);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molybdop_F e4S4)_(Molybdopterin)_(NADH_dhqG_C)	1	6	6	7	7	86	460	100	33	86
(NmrA);(Oxidored_q4)	1	9	9	32	32	73	238	100	0	28
(Proton_antipo_M);(Proton_antipo_N)_(Proton_antipo_M)	1	7	12	7	12	19	1718	100	58	100
(CHCH);(MRP-S35)	1	29	29	29	29	85	376	100	7	100
(CHCH);(Ribosomal_S11)	1	5	5	11	11	79	255	100	0	45
(CHCH);(Ribosomal_S2)	1	9	9	13	13	75	245	100	22	69
(CHCH);(Ribosomal_S21)	1	29	29	32	32	85	919	100	7	91
(CHCH);(Ribosomal_S6)	1	29	29	29	29	85	509	100	7	100
(CHCH);(Ribosomal_S7)	1	29	29	32	32	85	833	100	7	91
(DAP3);(MRP-L46)	1	16	16	18	18	85	299	100	0	89
(DAP3);(MRP-S28)	1	28	28	37	37	84	1107	100	7	76
(DAP3);(Ribosomal_S11)	1	5	5	5	5	4	492	100	0	100
(DAP3);(Ribosomal_S7)	1	29	29	36	36	85	914	100	7	81
(DAP3);(Ribosomal_S7)	2	7	7	36	36	23	1099	86	0	19
(DAP3);(Ribosomal_S9)	1	35	35	42	42	17	959	100	6	83
(DAP3);(Ribosomal_S9)	2	7	7	42	42	23	754	86	0	17
(DUF1713);(Ribosomal_S15)	1	29	29	29	29	5	617	100	7	100
(L51_S25_CI-B8);(MRP-S22)	1	29	29	29	29	68	458	100	7	100
(L51_S25_CI-B8);(MRP-S26)	1	29	29	29	29	75	604	100	7	100
(L51_S25_CI-B8);(Ribosomal_L4)	1	5	5	5	5	3	1530	100	0	100
(L51_S25_CI-B8);(Ribosomal_S16)	1	29	29	29	29	87	631	100	7	100
(L51_S25_CI-B8);(Ribosomal_S17)	1	29	29	29	29	86	1317	100	7	100
(L51_S25_CI-B8);(Ribosomal_S5)_(Ribosomal_S5_C)	1	29	29	29	29	82	537	100	7	100
(MRP-S22);(MRP-S34)	1	28	28	29	29	68	261	100	7	97
(MRP-S22);(Ribosomal_S16)	1	29	29	29	29	68	1091	100	7	100
(MRP-S22);(Ribosomal_S18)	1	29	29	29	29	68	2014	100	7	100
(MRP-S22);(Ribosomal_S5)_(Ribosomal_S5_C)	1	29	29	29	29	68	1188	100	7	100
(MRP-S23);(MRP-S35)	1	29	29	29	29	82	907	100	7	100
(MRP-S23);(Ribosomal_S18)	1	29	29	29	29	80	463	100	7	100
(MRP-S23);(Ribosomal_S5)_(Ribosomal_S5_C)	1	29	29	29	29	82	585	100	7	100
(MRP-S24);(MRP-S28)	1	28	28	28	28	84	1361	100	7	100
(MRP-S24);(MRP-S31)	1	29	29	29	29	75	277	100	7	100
(MRP-S24);(MRP-S33)	1	29	29	29	29	83	536	100	7	100
(MRP-S24);(Ribosomal_S10)	1	29	29	29	29	13	595	100	7	100
(MRP-S24);(Ribosomal_S14)	1	29	29	29	29	86	985	100	7	100
(MRP-S24);(Ribosomal_S5)_(Ribosomal_S5_C)	1	29	29	29	29	82	516	100	7	100
(MRP-S24);(Ribosomal_S9)	1	20	20	23	23	78	225	100	10	87
(MRP-S26);(MRP-S34)	1	29	29	29	29	75	731	100	7	100
(MRP-S26);(Ribosomal_S17)	1	27	27	27	27	75	264	100	7	100
(MRP-S26);(Ribosomal_S18)	1	29	29	29	29	75	794	100	7	100
(MRP-S26);(Ribosomal_S18)	2	29	29	29	29	75	605	100	7	100
(MRP-S27);(MRP-S34)	1	27	27	27	27	81	1339	100	7	100
(MRP-S27);(Ribosomal_L19)	1	14	14	14	14	81	529	100	0	100
(MRP-S27);(Ribosomal_S18)	1	27	27	27	27	81	297	100	7	100
(MRP-S28);(MRP-S31)	1	28	28	28	28	75	1161	100	7	100
(MRP-S28);(Ribosomal_S5)_(Ribosomal_S5_C)	1	7	7	7	7	30	1496	86	0	100
(MRP-S28);(Ribosomal_S9)	1	28	28	35	35	78	1313	100	7	80
(MRP-S28);(Ribosomal_S9)	2	7	7	35	35	30	672	86	0	20
(MRP-S31);(MRP-S33)	1	29	29	29	29	75	672	100	7	100
(MRP-S31);(Ribosomal_S10)	1	29	29	29	29	75	250	100	7	100
(MRP-S31);(Ribosomal_S14)	1	29	29	29	29	75	605	100	7	100
(MRP-S32);(TGS)_(tRNA_SAD)	1	17	17	17	17	73	398	100	6	100
(MRP-S33);(Ribosomal_S14)	1	36	36	36	36	22	1209	97	6	100
(MRP-S33);(Ribosomal_S5)_(Ribosomal_S5_C)	1	29	29	29	29	82	1026	100	7	100
(MRP-S34);(Ribosomal_S16)	1	23	23	30	30	82	230	100	9	77
(MRP-S34);(Ribosomal_S18)	1	29	29	29	29	82	763	100	7	100
(MRP-S35);(Ribosomal_S18)	1	20	20	24	24	83	218	100	10	83
(MRP-S35);(Ribosomal_S2)	1	29	29	29	29	7	1101	100	7	100
(MRP-S35);(Ribosomal_S21)	1	29	29	29	29	85	698	100	7	100
(Ribosomal_L10);(Ribosomal_L12_N)_(Ribosomal_L12)	2	15	15	33	34	84	591	100	7	45
(Ribosomal_L10);(Ribosomal_L12_N)_(Ribosomal_L12)	3	15	15	33	34	84	607	100	7	45
(Ribosomal_L10);(Ribosomal_L12_N)_(Ribosomal_L12)	4	13	13	33	34	84	425	100	8	39
(Ribosomal_L10);(Ribosomal_L12_N)_(Ribosomal_L12)	5	13	13	33	34	84	346	100	8	39
(Ribosomal_L10);(Ribosomal_L12_N)_(Ribosomal_L12)	6	12	12	33	34	84	298	100	8	36
(Ribosomal_L10);(Ribosomal_L12_N)_(Ribosomal_L12)	7	11	11	33	34	84	332	100	9	33
(Ribosomal_L21p);(Ribosomal_L30)	1	9	9	9	9	31	642	89	11	100
(Ribosomal_S10);(Ribosomal_S5)_(Ribosomal_S5_C)	1	7	7	7	7	36	1513	86	0	100
(Ribosomal_S11);(Ribosomal_S9)	1	6	6	6	6	4	1264	100	0	100
(Ribosomal_S2);(Ribosomal_S21)	1	26	26	36	36	75	236	100	8	72
(Ribosomal_S21);(Ribosomal_S9)	1	22	22	25	25	78	233	100	9	88
(Ribosomal_L29);(SRP54_N)_(SRP54)_(SRP_SPB)	1	6	6	8	8	27	410	83	33	75
(GP120);(V-set_2)_(C1-set)	1	37	47	86	111	12	970	100	47	43
(GP120);(V-set_2)_(C1-set)	2	14	20	86	111	72	305	95	40	16
(GP120);(V-set_2)_(C1-set)	3	11	20	86	111	12	253	0	5	13
(GP120);(V-set_2)_(C1-set)	4	5	5	86	111	68	558	100	20	6
(GP41);(V-set_2)_(C1-set)	1	14	24	36	61	76	353	100	42	39
(GP41);(V-set_2)_(C1-set)	2	8	12	36	61	0	630	100	92	22
(SRP14);(SRP9-21)	1	9	11	9	11	81	1354	91	36	100
(A2M_recep)_(NTR);(MG1)_(MG2)_(MG3)_(MG4)_(A2M_BRD)	1	8	12	8	12	25	756	100	100	100
(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C);(Ribosom al_L10)_(RL10P_insert)	1	11	11	11	11	56	568	100	0	100
(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C);(Ribosom al_L6)_(Ribosomal_L6)	1	8	8	17	25	38	243	100	0	47
(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C);(Ribosom al_L6)_(Ribosomal_L6)	2	7	7	17	25	46	232	100	0	41
(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C);(Ribosom al_S30)	1	10	10	16	16	58	271	100	0	62
(AAA)_(Cdc6_C);(AAA_16)_(ORC4_C)	2	6	6	13	13	46	2180	100	33	46
(AAA)_(Cdc6_C);(AAA_16)_(ORC5_C)	2	6	6	13	13	34	458	100	33	46
(AAA_16)_(ORC4_C);(AAA_16)_(ORC5_C)	1	24	24	24	24	10	2674	100	8	100
(AAA_16)_(ORC4_C);(ORC3_N)_(ORC3_ins)_(ORC_WH_C)	1	16	16	17	17	11	279	100	6	94
(AAA_16)_(ORC5_C);(ORC2)	1	23	23	23	23	21	883	100	4	100
(AAA_16)_(ORC5_C);(ORC3_N)_(ORC3_ins)_(ORC_WH_C)	1	18	18	18	18	11	1823	100	6	100
(ORC3_N)_(ORC3_ins)_(ORC_WH_C);(ORC6)	1	7	7	8	8	0	676	100	0	88
(Rhv);(V-set)_(C1-set)	1	5	5	19	19	8	678	100	0	26
(BCAS2);(Myb_DNA-binding)_(Myb_DNA-binding)_(Myb_Cef)	1	11	11	11	11	25	1747	100	18	100
(Cwf_Cwc_15);(EFTUD2)_(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EF G_IV)_(EFG_C)	1	12	12	12	12	43	566	100	8	100
(Cwf_Cwc_15);(PRO8NT)_(PROCN)_(RRM_4)_(U5_2-snRNA_bdg)_(U6-s nRNA_bdg)_(PRP8_domainIV)_(JAB)_(PROCT)	1	18	18	18	18	22	1596	100	17	100
(Cwf_Cwc_15);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40 )	1	15	15	15	15	3	1400	100	13	100
(EFTUD2)_(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C) ;(LSM)	1	34	34	34	34	34	490	100	18	100
(EFTUD2)_(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C) ;(PRO8NT)_(PROCN)_(RRM_4)_(U5_2-snRNA_bdg)_(U6-snRNA_bdg)_(P RP8_domainIV)_(JAB)_(PROCT)	1	17	17	17	17	34	5834	100	12	100
(EFTUD2)_(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C) ;(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	16	16	16	16	45	994	100	19	100
(G10);(PRO8NT)_(PROCN)_(RRM_4)_(U5_2-snRNA_bdg)_(U6-snRNA_bd g)_(PRP8_domainIV)_(JAB)_(PROCT)	1	13	13	13	13	54	1461	100	15	100
(G10);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	2	11	11	26	26	42	910	100	9	42
(Pro_isomerase);(SKIP_SNW)	1	10	10	10	10	3	968	100	10	100
(Pro_isomerase);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	11	11	11	11	42	732	100	9	100
(SKIP_SNW);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	12	12	20	20	42	794	100	8	60
(SKIP_SNW);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	18	18	18	18	2	1245	100	17	100
(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40);(WD40)_(WD40)_(WD4 0)_(WD40)_(WD40)_(WD40)_(WD40)	1	10	10	10	10	42	930	100	0	100
(HECT);(ubiquitin)	1	7	7	13	14	51	854	86	86	54
(HECT);(ubiquitin)	2	5	6	13	14	46	746	100	33	38
(cwf21);(MIF4G)_(MA3)	1	8	8	8	8	0	339	100	0	100
(cwf21);(PRO8NT)_(PROCN)_(RRM_4)_(U5_2-snRNA_bdg)_(U6-snRNA_ bdg)_(PRP8_domainIV)_(JAB)_(PROCT)	1	14	14	14	14	0	1196	100	14	100
(Isy1);(Saf4_Yju2)	1	7	7	7	7	3	758	100	0	100
(Mago_nashi);(RRM_1)	1	15	15	15	15	0	1187	100	67	100
(MIF4G)_(MA3);(PRO8NT)_(PROCN)_(RRM_4)_(U5_2-snRNA_bdg)_(U6- snRNA_bdg)_(PRP8_domainIV)_(JAB)_(PROCT)	1	5	5	5	5	28	1919	100	20	100
(RRM_1);(SKIP_SNW)	1	17	17	17	17	21	1283	100	0	100
(Hemagglutinin);(V-set)_(C1-set)	1	15	16	126	140	10	560	100	44	12
(Hemagglutinin);(V-set)_(C1-set)	2	14	15	126	140	4	477	100	27	11
(Hemagglutinin);(V-set)_(C1-set)	3	10	12	126	140	16	491	92	17	8
(Hemagglutinin);(V-set)_(C1-set)	4	8	8	126	140	23	684	100	38	6
(Hemagglutinin);(V-set)_(C1-set)	5	8	8	126	140	49	518	88	88	6
(Hemagglutinin);(V-set)_(C1-set)	6	8	9	126	140	35	271	100	44	6
(Hemagglutinin);(V-set)_(C1-set)	7	8	8	126	140	32	263	100	12	6
(Hemagglutinin);(V-set)_(C1-set)	8	7	9	126	140	15	575	100	33	6
(Hemagglutinin);(V-set)_(C1-set)	9	6	6	126	140	14	336	100	50	5
(Hemagglutinin);(V-set)_(C1-set)	10	5	7	126	140	16	349	100	29	4
(Hemagglutinin);(V-set)_(C1-set)	12	5	5	126	140	0	445	100	80	4
(Hemagglutinin);(V-set)_(C1-set)	13	5	6	126	140	5	385	100	17	4
(Hemagglutinin);(V-set)_(C1-set)	14	5	5	126	140	23	453	100	40	4
(Bud13);(RRM_1)	1	12	13	12	13	1	1106	100	8	100
(G10);(RRM_1)	1	6	6	7	7	21	213	100	0	86
(MMS1_N)_(CPSF_A);(SF3b1)	1	14	14	14	14	18	1491	100	14	100
(SF3b1);(SF3b10)	1	12	12	12	12	18	1072	100	17	100
(MCM_N)_(MCM_OB)_(MCM)_(MCM_lid);(MCM_N)_(MCM_OB)_(MCM)_(MCM _lid)_(MCM6_C)	1	23	23	23	23	44	3222	100	30	100
(MCM_N)_(MCM_OB)_(MCM)_(MCM_lid);(MCM2_N)_(MCM_N)_(MCM_OB)_( MCM)_(MCM_lid)	1	22	22	23	23	30	2846	100	50	96
(MCM_N)_(MCM_OB)_(MCM)_(MCM_lid)_(MCM6_C);(MCM2_N)_(MCM_N)_( MCM_OB)_(MCM)_(MCM_lid)	1	27	27	27	27	33	2789	100	41	100
(Stap_Strp_toxin)_(Stap_Strp_tox_C);(V-set)_(C1-set)	1	8	10	12	14	13	694	100	40	67
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2 _2)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_(RNA _pol_Rpb2_7)	1	71	71	72	72	42	1698	100	15	99
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2 _2)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_(RNA _pol_Rpb2_7)	2	69	69	72	72	42	301	100	16	96
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_( RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_3)_(RNA_pol_R pb2_45)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	80	97	80	97	42	8076	100	11	100
(Herpes_MCP);(Herpes_V23)	1	15	15	25	25	16	942	100	0	60
(Herpes_MCP);(Herpes_V23)	2	15	15	25	25	17	1181	100	0	60
(Herpes_MCP);(Herpes_V23)	3	12	12	25	25	16	446	100	0	48
(Herpes_MCP);(Herpes_V23)	4	9	9	25	25	22	948	100	0	36
(Herpes_MCP);(Herpes_V23)	5	9	9	25	25	17	353	100	0	36
(Herpes_MCP);(Herpes_V23)	6	7	7	25	25	41	736	100	0	28
(Herpes_MCP);(Herpes_V23)	7	7	7	25	25	41	560	100	0	28
(Herpes_MCP);(Herpes_V23)	8	6	6	25	25	43	1061	100	0	24
(Herpes_MCP);(Herpes_VP19C)	1	10	10	25	25	33	1386	100	0	40
(Herpes_MCP);(Herpes_VP19C)	2	10	10	25	25	13	1201	100	0	40
(Herpes_MCP);(Herpes_VP19C)	3	9	9	25	25	31	1300	100	0	36
(Herpes_MCP);(Herpes_VP19C)	4	7	7	25	25	33	988	100	0	28
(Herpes_MCP);(Herpes_VP19C)	5	7	7	25	25	9	1511	100	0	28
(Herpes_MCP);(Herpes_VP19C)	6	6	6	25	25	33	703	100	0	24
(Herpes_MCP);(Herpes_VP19C)	7	6	6	25	25	33	1183	100	0	24
(eIF-6);(NOG1_N)_(NOG1)_(NOGCT)	1	12	12	12	12	46	2319	100	17	100
(eIF-6);(Ribosomal_L14)	1	38	38	38	38	60	833	100	37	100
(eIF-6);(Ribosomal_L24e)	1	9	9	10	10	23	459	100	33	90
(eIF-6);(Ribosomal_L3)	1	22	22	22	22	61	253	100	32	100
(KOW)_(Ribosomal_L14e);(Ribosomal_L34e)	1	5	5	5	5	84	464	100	0	100
(KOW)_(Ribosomal_L14e);(Ribosomal_L7Ae)	1	5	5	5	5	71	465	100	0	100
(NOG1_N)_(NOG1)_(NOGCT);(Ribosomal_L19e)	1	9	9	9	9	46	377	100	11	100
(NOG1_N)_(NOG1)_(NOGCT);(Ribosomal_L22)	1	8	8	8	8	46	533	100	12	100
(NOG1_N)_(NOG1)_(NOGCT);(Ribosomal_L22e)	1	10	10	10	10	46	883	100	10	100
(NOG1_N)_(NOG1)_(NOGCT);(Ribosomal_L24e)	1	5	5	5	5	46	2380	100	0	100
(NOG1_N)_(NOG1)_(NOGCT);(Ribosomal_L3)	1	12	12	12	12	46	638	100	17	100
(NOG1_N)_(NOG1)_(NOGCT);(Ribosomal_L31e)	1	10	10	10	10	46	316	100	10	100
(NOG1_N)_(NOG1)_(NOGCT);(Ribosomal_L39)	1	10	10	10	10	46	919	100	10	100
(Peptidase_M24);(Ribosomal_L23eN)_(Ribosomal_L23)	1	20	20	20	20	26	504	100	30	100
(Ribosomal_L1);(Ribosomal_L36e)	1	10	10	20	20	25	336	100	10	50
(Herpes_V23);(Herpes_VP19C)	1	11	11	25	25	33	1252	100	0	44
(Herpes_V23);(Herpes_VP19C)	2	11	11	25	25	33	999	100	0	44
(Herpes_V23);(Herpes_VP19C)	3	10	10	25	25	33	1254	100	0	40
(Herpes_V23);(Herpes_VP19C)	4	10	10	25	25	33	1552	100	0	40
(Ribosomal_L26)_(KOW)_(Ribosomal_L26);(Ribosomal_L29)	1	21	34	23	36	8	342	0	0	91
(Herpes_MCP);(Herpes_UL35)	1	10	10	10	10	25	1587	100	0	100
(Herpes_MCP);(Herpes_UL35)	2	9	9	10	10	25	1376	100	0	90
(NGP1NT)_(MMR_HSR1);(NOG1_N)_(NOG1)_(NOGCT)	1	6	6	6	6	46	1216	100	17	100
(Ribosomal_L7Ae);(WD40)_(WD40)	1	21	21	21	21	33	467	100	5	100
(AARP2CN)_(RIBIOP_C);(Ribosom_S12_S23)	1	6	6	6	6	30	670	100	83	100
(Ribosomal_L7Ae);(S4)	1	18	18	18	18	61	256	100	6	100
(Ribosomal_S17e);(Ribosomal_S2)_(40S_SA_C)	1	133	133	133	133	1	1261	99	8	100
(Ribosomal_S17e);(Ribosomal_S3Ae)	1	66	66	71	71	4	232	100	6	93
(Ribosomal_S2)_(40S_SA_C);(Ribosomal_S21e)	1	135	135	135	135	0	1490	99	8	100
(Ribosomal_S2)_(40S_SA_C);(Ribosomal_S5)_(Ribosomal_S5_C)	1	132	132	132	132	3	529	99	8	100
(Ribosomal_L7Ae);(ubiquitin)_(Ribosomal_S27)	1	105	105	109	109	5	585	98	7	96
(KH_8)_(KH_1);(Ribosomal_S11)	1	17	17	17	17	50	930	100	29	100
(Brix);(MMR_HSR1)_(AARP2CN)_(RIBIOP_C)	1	12	12	12	12	49	261	100	0	100
(Brix);(Mpp10)	1	25	25	27	27	32	1362	100	4	93
(Brix);(Nop14)	1	13	13	13	13	24	993	100	0	100
(Brix);(Ribosomal_S9)	1	22	22	22	22	58	312	100	5	100
(Brix);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD4 0)_(WD40)_(WD40)_(WD40)_(Utp12)	1	16	16	16	16	55	338	100	6	100
(CBF);(EMG1)	1	13	13	15	15	67	386	100	0	87
(CBF);(Ribosomal_S13)	1	9	9	9	9	35	347	100	0	100
(CBF);(WD40)_(Utp12)	1	14	14	14	14	67	892	100	0	100
(CBF);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(UTP15_C)	1	15	15	15	15	30	608	100	0	100
(DUF1726)_(Helicase_RecD)_(GNAT_acetyltr_2)_(tRNA_bind_2);(P ALB2_WD40)_(NUC153)	1	12	12	12	12	43	525	100	0	100
(DUF1726)_(Helicase_RecD)_(GNAT_acetyltr_2)_(tRNA_bind_2);(R ibosomal_S6e)	1	9	9	9	9	63	384	100	0	100
(EMG1);(Nop14)	1	22	22	22	22	24	1159	100	5	100
(EMG1);(Ribosomal_S7)	1	21	21	21	21	69	384	100	5	100
(Fcf1);(Fibrillarin)	1	24	24	24	24	53	670	100	4	100
(Fcf1);(Ribosomal_S8)	1	23	23	23	23	52	364	100	4	100
(Fcf1);(S4)	1	27	27	27	27	52	847	100	4	100
(Fcf1);(Sas10_Utp3)_(Sas10)	1	24	24	24	24	30	679	100	4	100
(Fcf1);(WD40)_(WD40)_(WD40)_(Sof1)	1	20	20	20	20	49	564	100	5	100
(Fcf1);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD4 0)_(WD40)_(WD40)_(WD40)_(Utp12)	1	10	10	10	10	53	258	100	10	100
(Fcf2);(Fibrillarin)	1	23	23	23	23	30	1460	100	4	100
(Fcf2);(MMR_HSR1)_(AARP2CN)_(RIBIOP_C)	1	12	12	12	12	31	1176	100	8	100
(Fcf2);(Sas10_Utp3)_(Sas10)	1	16	16	16	16	30	278	100	6	100
(Fcf2);(U3_assoc_6)_(TPR_14)	1	15	15	15	15	74	989	100	0	100
(Fibrillarin);(NOP5NT)_(Nop)	1	26	26	26	26	39	1319	100	4	100
(Fibrillarin);(Ribosomal_L7Ae)	1	22	22	27	30	61	456	100	5	81
(Fibrillarin);(Sas10_Utp3)_(Sas10)	1	23	23	23	23	30	1094	100	4	100
(Fibrillarin);(Utp11)	1	22	22	22	22	29	998	100	5	100
(Ge1_WD40)_(WD40)_(BING4CT);(U3_assoc_6)_(TPR_14)	1	14	14	14	14	74	388	100	0	100
(KH_8);(Ribosomal_S11)	1	18	18	21	21	69	860	100	6	86
(KH_8);(Ribosomal_S3Ae)	1	11	11	11	11	69	406	100	9	100
(KH_8);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD4 0)_(WD40)_(WD40)_(WD40)_(Utp12)	1	9	9	9	9	55	323	100	11	100
(KH_8);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD4 0)_(WD40)_(WD40)_(WD40)_(Utp12)	2	9	9	9	9	45	382	100	11	100
(MMR_HSR1)_(AARP2CN)_(RIBIOP_C);(Mpp10)	1	24	24	24	24	32	1827	100	4	100
(MMR_HSR1)_(AARP2CN)_(RIBIOP_C);(Ribosom_S12_S23)	1	27	27	27	27	49	1252	100	4	100
(MMR_HSR1)_(AARP2CN)_(RIBIOP_C);(RTC)_(RTC_insert)_(RTC)	1	28	28	28	28	37	2704	100	4	100
(MMR_HSR1)_(AARP2CN)_(RIBIOP_C);(Sas10_Utp3)_(Sas10)	1	17	17	17	17	31	713	100	6	100
(MMR_HSR1)_(AARP2CN)_(RIBIOP_C);(Utp11)	1	14	14	14	14	29	2451	100	7	100
(Mpp10);(Nop14)	1	10	10	10	10	32	615	100	0	100
(Mpp10);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD 40)_(WD40)_(WD40)_(WD40)_(Utp12)	1	16	16	23	23	32	1586	100	6	70
(Mpp10);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD 40)_(WD40)_(WD40)_(WD40)_(Utp12)	2	15	15	23	23	32	1011	100	7	65
(Nop14);(Ribosom_S12_S23)	1	19	19	19	19	24	625	100	5	100
(Nop14);(Ribosomal_S13)	1	9	9	9	9	75	506	100	0	100
(Nop14);(RTC)_(RTC_insert)_(RTC)	1	17	17	17	17	24	763	100	6	100
(NOP5NT)_(Nop);(Ribosomal_L7Ae)	1	26	26	26	26	39	502	100	4	100
(NOP5NT)_(Nop);(U3_assoc_6)_(TPR_14)	1	23	23	23	23	24	768	100	4	100
(NOP5NT)_(Nop);(U3snoRNP10)_(HEAT)_(BP28CT)	1	6	6	6	6	24	734	100	17	100
(NOP5NT)_(Nop);(Utp11)	1	18	18	18	18	29	278	100	6	100
(NOP5NT)_(Nop);(Utp14)	1	21	21	21	21	28	592	100	5	100
(NOP5NT)_(Nop);(WD40)_(WD40)	1	19	19	19	19	33	415	100	5	100
(NOP5NT)_(Nop);(WD40)_(WD40)_(WD40)_(Sof1)	1	23	23	23	23	49	902	100	4	100
(Nrap)_(Nrap_D2)_(Nrap_D3)_(Nrap_D4)_(Nrap_D5)_(Nrap_D6);(Ri bosomal_S3Ae)	1	18	18	18	18	27	1081	100	0	100
(Nrap)_(Nrap_D2)_(Nrap_D3)_(Nrap_D4)_(Nrap_D5)_(Nrap_D6);(RR M_Rrp7)_(RRP7)	1	23	23	23	23	25	2522	100	4	100
(PALB2_WD40)_(NUC153);(Ribosomal_S6e)	1	14	14	14	14	43	686	100	0	100
(PALB2_WD40)_(NUC153);(Ribosomal_S8e)	1	14	14	14	14	43	759	100	0	100
(PIN_4)_(Rrp44_CSD1)_(OB_Dis3)_(RNB)_(Rrp44_S1);(RNase_PH)_( RNase_PH_C)	1	15	15	15	15	34	1107	100	47	100
(PIN_4)_(Rrp44_CSD1)_(OB_Dis3)_(RNB)_(Rrp44_S1);(RNase_PH)_( RNase_PH_C)	2	12	12	15	15	23	759	100	50	80
(PIN_4)_(Rrp44_CSD1)_(OB_Dis3)_(RNB)_(Rrp44_S1);(RNase_PH)_( RNase_PH_C)	3	10	10	15	15	34	1017	100	40	67
(Ribosomal_L1);(RRT14)	1	7	7	7	7	63	977	100	0	100
(Ribosomal_L7Ae);(Utp11)	1	17	17	17	17	29	592	100	6	100
(Ribosomal_S13);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(UTP15_C)	1	15	15	15	15	30	491	100	7	100
(Ribosomal_S24e);(Ribosomal_S4)_(S4)	1	9	9	9	9	31	258	100	22	100
(Ribosomal_S28e);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(Utp12)	1	22	22	22	22	44	607	100	5	100
(Ribosomal_S7);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(UTP15_C)	1	20	20	20	20	30	509	100	5	100
(Ribosomal_S7);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD 40)_(WD40)_(WD40)_(WD40)_(WD40)_(Utp12)	1	14	14	14	14	55	234	100	7	100
(Ribosomal_S7e);(Utp14)	1	14	14	14	14	30	308	100	7	100
(Ribosomal_S7e);(WD40)_(WD40)_(WD40)_(Sof1)	1	19	19	19	19	49	417	100	5	100
(Ribosomal_S8);(WD40)_(WD40)_(WD40)_(Sof1)	1	19	19	19	19	49	441	100	5	100
(Ribosomal_S9);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD 40)_(WD40)_(WD40)_(WD40)_(WD40)_(Utp12)	1	21	21	21	21	55	512	100	5	100
(RNase_PH);(RNase_PH)_(RNase_PH_C)	1	17	17	17	17	3	1604	100	53	100
(RNase_PH);(RNase_PH)_(RNase_PH_C)	2	17	17	17	17	18	1162	100	53	100
(RNase_PH)_(RNase_PH_C);(Rrp40_N)_(KH_6)	1	17	17	17	17	28	789	100	53	100
(RNase_PH)_(RNase_PH_C);(Rrp40_N)_(KH_6)	2	17	17	17	17	26	1196	100	47	100
(RTC)_(RTC_insert)_(RTC);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_ (WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(Utp12)	1	21	21	21	21	37	473	100	5	100
(S4);(Sas10_Utp3)_(Sas10)	1	22	22	22	22	30	432	100	5	100
(U3_assoc_6)_(TPR_14);(Utp14)	1	21	21	21	21	24	1182	100	5	100
(U3_assoc_6)_(TPR_14);(WD40)_(WD40)	1	20	20	20	20	2	565	100	5	100
(U3_assoc_6)_(TPR_14);(WD40)_(WD40)_(WD40)_(Sof1)	1	20	20	20	20	24	383	100	5	100
(U3_snoRNA_assoc);(Utp11)	1	21	21	21	21	23	600	100	5	100
(U3_snoRNA_assoc);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	16	16	16	16	88	1233	100	0	100
(U3snoRNP10)_(HEAT)_(BP28CT);(WD40)_(WD40)	1	7	7	7	7	24	1274	100	14	100
(U3snoRNP10)_(HEAT)_(BP28CT);(WD40)_(WD40)_(WD40)_(Sof1)	1	5	5	5	5	24	477	100	20	100
(Utp11);(WD40)_(WD40)	1	9	9	9	9	29	372	100	0	100
(Utp14);(WD40)_(WD40)_(WD40)_(Sof1)	1	21	21	21	21	28	2311	100	5	100
(Ribosomal_S24e);(Sas10_Utp3)	1	11	11	11	11	28	424	100	0	100
(S4);(Sas10_Utp3)	1	11	11	11	11	28	1429	100	0	100
(Ribosomal_S24e);(RS4NT)_(S4)_(Ribosomal_S4e)_(40S_S4_C)	1	10	10	10	10	23	519	90	0	100
(Ribosomal_S6e);(RS4NT)_(S4)_(Ribosomal_S4e)_(40S_S4_C)	1	10	10	10	10	36	335	90	0	100
(RS4NT)_(S4)_(Ribosomal_S4e)_(40S_S4_C);(S4)	1	5	5	5	5	36	429	80	0	100
(Ribosomal_L29e);(Ribosomal_L30_N)_(Ribosomal_L30)	1	52	52	55	55	82	491	100	2	95
(ABC_tran)_(BCA_ABC_TP_C);(LptF_LptG)	1	11	11	11	11	11	984	100	64	100
(Ribosomal_L6)_(Ribosomal_L6);(ubiquitin)_(Ribosomal_L40e)	1	91	91	91	91	28	644	99	11	100
(Acetyltransf_1);(TPR_1)_(NARP1)	1	5	5	5	5	30	2635	100	60	100
(SHS2_Rpb7-N)_(S1);(TFIIE_alpha)_(TF_Zn_Ribbon)	1	6	6	6	6	55	516	100	0	100
(TBP)_(TBP);(TFIIA_gamma_N)_(TFIIA_gamma_C)	1	12	13	12	13	39	419	100	31	100
(TFIIE_alpha)_(TF_Zn_Ribbon);(TFIIE_beta)_(TFA2_Winged_2)	1	7	7	7	7	11	1318	100	14	100
(TFIIF_alpha);(TFIIF_beta_N)_(TFIIF_beta)	1	11	11	11	11	87	1960	100	9	100
(ACR_tran);(HlyD_D23)	1	7	7	7	7	58	1248	100	71	100
(ACR_tran);(HlyD_D23)	2	7	7	7	7	58	733	100	71	100
(ACR_tran);(HlyD_D23)	3	6	6	7	7	58	242	100	67	86
(Actin);(ARPC4)	1	8	24	8	24	65	788	100	83	100
(Actin);(P16-Arc)	1	6	22	6	22	25	535	100	91	100
(Actin);(P21-Arc)	1	9	25	9	25	32	796	100	76	100
(Actin);(P34-Arc)	1	10	26	10	26	45	1511	100	81	100
(ARPC4);(P16-Arc)	1	11	27	11	27	25	837	100	78	100
(ARPC4);(P34-Arc)	1	9	25	9	25	11	1991	100	84	100
(P16-Arc);(WD40)_(WD40)_(Lactonase)	1	6	21	6	22	69	619	100	90	100
(Actin);(F_actin_cap_B)	1	7	7	7	7	51	806	100	43	100
(Actin);(F-actin_cap_A)	1	9	9	9	9	51	593	100	44	100
(Actin);(F-actin_cap_A)	2	6	6	9	9	51	403	100	50	67
(C1-set);(Ig_2)_(ig)	1	7	9	8	10	81	582	100	11	88
(Ig_2)_(ig);(MHC_I)_(C1-set)	1	8	10	8	10	6	348	100	10	100
(EF-hand_1)_(EF-hand_7);(Myosin_N)_(Myosin_head)_(EzrA)	1	9	11	9	11	33	1253	82	27	100
(EF-hand_7)_(EF-hand_7);(Myosin_head)_(IQ)	1	7	7	7	7	44	1137	100	57	100
(Actin);(RPEL)	1	6	7	6	7	28	916	100	100	100
(NusB);(Ribosomal_S10)	1	9	10	9	10	23	802	100	30	100
(EnY2);(Sgf11_N)_(Sgf11)	1	9	12	9	12	23	1362	100	92	100
(EnY2);(zf-UBP)_(UCH)	1	9	12	9	12	37	918	100	92	100
(Sgf11_N)_(Sgf11);(zf-UBP)_(UCH)	1	9	12	9	12	23	1684	100	92	100
(TAF)_(TAF6_C);(TFIID-31kDa)	1	9	9	9	9	20	1800	100	44	100
(TFIID_20kDa);(TFIID-31kDa)	1	8	8	8	8	12	634	100	38	100
(ubiquitin);(zf-UBP)_(UCH)	1	5	5	5	5	38	1718	100	60	100
(Ion_trans)_(Na_trans_cytopl)_(Ion_trans)_(Na_trans_assoc)_( Ion_trans)_(Ion_trans)_(GPHH);(V-set)	1	5	5	6	6	79	267	100	0	83
(Adaptin_N);(Arf)	1	7	7	7	7	12	857	100	14	100
(Clat_adaptor_s);(Clat_adaptor_s)_(Adap_comp_sub)	1	7	9	9	11	40	494	100	78	78
(RanGAP1_C);(UQ_con)	1	6	11	6	11	81	569	100	9	100
(JAB);(ubiquitin)	1	8	12	8	12	10	1199	83	83	100
(AdenylateSensor);(AMPKBI)	1	8	20	8	20	22	1987	100	100	100
(AMPKBI);(CBS)_(CBS)_(CBS)_(CBS)	1	5	12	5	12	88	901	100	100	100
(Kazal_1);(Trypsin)	1	11	36	11	36	1	645	100	97	100
(ECSIT);(Ribosomal_S11)	1	5	5	5	5	4	367	100	0	100
(Kunitz_legume);(Trypsin)	1	13	20	14	22	28	981	100	90	93
(Cyclin_N);(Pkinase)	1	6	6	7	13	12	1470	100	67	86
(Pkinase);(Tat)	1	5	6	5	6	14	227	100	83	100
(Cyclin_N)_(TFIIB);(Pkinase)	1	5	8	5	8	14	1022	100	75	100
(Globin);(NEAT)	1	6	6	6	6	45	624	100	50	100
(Pkinase);(RIIa)_(cNMP_binding)_(cNMP_binding)	1	6	9	6	9	36	1933	100	78	100
(POP1)_(POPLD);(Rpp20)	1	7	7	7	7	20	1252	100	0	100
(RNase_P_p30);(RNase_P-MRP_p29)	1	9	9	9	9	12	1500	100	0	100
(RNase_P-MRP_p29);(Rpr2)	1	8	8	11	11	10	1142	100	12	73
(Ald_Xan_dh_C)_(Ald_Xan_dh_C2);(FAD_binding_5)_(CO_deh_flav_ C)	1	9	26	9	26	13	1187	100	100	100
(Ald_Xan_dh_C)_(Ald_Xan_dh_C2);(Fer2)_(Fer2_2)	1	8	23	8	23	19	2050	100	100	100
(FAD_binding_5)_(CO_deh_flav_C);(Fer2)_(Fer2_2)	1	8	23	8	23	13	1344	100	100	100
(Alpha_E1_glycop);(Alpha_E2_glycop)	1	14	16	15	17	56	808	100	25	93
(Lipoprotein_18);(YfiO)	1	16	18	16	132	84	2209	100	83	100
(Amidase);(GatB_N)_(GatB_Yqey)	1	5	9	5	9	37	1363	100	100	100
(GatB_N)_(GatB_Yqey);(Glu-tRNAGln)	1	5	11	5	11	28	1786	100	100	100
(Aminotran_5);(NifU_N)	1	7	12	8	13	23	913	100	92	88
(Lys);(V-set)_(C1-set)	1	7	16	15	27	84	386	100	12	47
(Lys);(V-set)_(C1-set)	2	7	16	15	27	84	520	100	12	47
(ANAPC2);(ANAPC4_WD40)_(ANAPC4)	1	10	10	10	10	79	540	100	40	100
(ANAPC2);(zf-ANAPC11)	1	11	11	11	11	79	1692	100	36	100
(CDC45);(MCM_N)_(MCM_OB)_(MCM)_(MCM_lid)	1	17	17	17	17	22	768	100	47	100
(CDC45);(MCM2_N)_(MCM_N)_(MCM_OB)_(MCM)_(MCM_lid)	1	16	16	16	16	22	534	100	50	100
(CDC45);(Sld5)	1	15	15	16	16	22	265	100	47	94
(CDC45);(Sld5)_(SLD5_C)	1	13	13	13	13	25	850	100	31	100
(MCM_N)_(MCM_OB)_(MCM)_(MCM_lid);(Sld5)	1	17	17	17	17	27	574	100	47	100
(MCM_N)_(MCM_OB)_(MCM)_(MCM_lid);(Sld5)	2	17	17	17	17	15	433	100	47	100
(MCM_N)_(MCM_OB)_(MCM)_(MCM_lid);(Sld5)	3	13	13	17	17	15	362	100	46	76
(Sld5);(Sld5)_(SLD5_C)	1	15	16	15	16	6	1355	100	44	100
(Sld5);(Sld5)_(SLD5_C)	2	13	14	15	16	18	1973	100	36	87
(Sld5);(Sld5)_(SLD5_C)	4	8	9	15	16	18	259	100	56	53
(ANATO)_(A2M)_(TED_complement)_(A2M_recep)_(NTR);(MG1)_(MG2) _(MG3)_(MG4)_(A2M_BRD)	1	5	7	5	7	28	4482	100	100	100
(Lys);(V-set)	1	6	10	25	60	18	743	100	70	24
(Lys);(V-set)	2	5	23	25	60	78	382	100	22	20
(Lys);(V-set)	3	5	23	25	60	76	526	100	22	20
(CSN8_PSD8_EIF3K);(PCI)_(Rpn3_C)	1	51	51	51	51	10	1939	100	29	100
(CSN8_PSD8_EIF3K);(RPN1_RPN2_N)_(PC_rep)_(PC_rep)_(PC_rep)_( HEAT_2)_(RPN2_C)	1	31	31	32	32	66	625	100	19	97
(Homeodomain)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Prot_ATP_I D_OB)_(AAA)_(AAA_lid_3)	1	15	15	15	15	29	2168	100	20	100
(JAB)_(MitMem_reg);(VWA_2)	1	44	44	44	44	4	609	100	20	100
(PCI)_(Rpn3_C);(RPN1_RPN2_N)_(PC_rep)_(PC_rep)_(PC_rep)_(HEA T_2)_(RPN2_C)	1	31	31	32	32	72	594	100	19	97
(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(RPN6_N)_(PCI)_(RPN6_C_he lix)	1	12	12	13	13	43	617	100	33	92
(RPN6_N)_(PCI)_(RPN6_C_helix);(RPN7)_(PCI)	1	58	58	58	58	37	1413	100	28	100
(MCR_alpha_N)_(MCR_alpha);(MCR_beta_N)_(MCR_beta)	1	8	23	10	25	19	2201	100	100	80
(MCR_alpha_N)_(MCR_alpha);(MCR_beta_N)_(MCR_beta)	2	8	9	10	25	17	1210	100	100	80
(MCR_alpha_N)_(MCR_alpha);(MCR_gamma)	1	7	8	10	25	47	2537	100	100	70
(MCR_alpha_N)_(MCR_alpha);(MCR_gamma)	2	6	7	10	25	47	572	100	100	60
(MCR_beta_N)_(MCR_beta);(MCR_gamma)	1	10	25	10	25	17	2599	100	100	100
(MeMO_Hyd_G);(Phenol_Hydrox)	1	8	43	8	46	13	1376	100	100	100
(Phenol_Hydrox);(Phenol_Hydrox)_(YHS)	1	13	69	13	70	10	4665	100	100	100
(Phenol_Hydrox);(Phenol_Hydrox)_(YHS)	2	6	32	13	70	10	422	100	100	46
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(RPN6_N)_(PCI)_( RPN6_C_helix)	2	7	7	19	19	43	387	100	14	37
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(RPN7)_(PCI)	1	12	12	22	22	37	312	100	33	55
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(RPN7)_(PCI)	2	7	7	22	22	37	839	100	14	32
(CSN8_PSD8_EIF3K);(PCI)_(Rpn9_C)	1	29	29	29	29	31	321	100	38	100
(JAB)_(MitMem_reg);(PCI)_(Rpn9_C)	1	30	30	30	30	31	1614	100	37	100
(JAB)_(MitMem_reg);(PCI)_(Rpn9_C)	2	18	18	30	30	31	257	100	39	60
(JAB)_(MitMem_reg);(ZapB)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3)	1	9	9	16	16	66	278	100	22	56
(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(ZapB)_(Prot_ATP_ID_OB)_( AAA)_(AAA_lid_3)	1	31	31	31	31	37	2701	100	35	100
(Proteasome_A_N)_(Proteasome);(ZapB)_(Prot_ATP_ID_OB)_(AAA)_ (AAA_lid_3)	2	5	5	19	19	61	376	100	0	26
(Proteasome_A_N)_(Proteasome);(ZapB)_(Prot_ATP_ID_OB)_(AAA)_ (AAA_lid_3)	3	5	5	19	19	51	503	100	0	26
(RPN6_N)_(PCI)_(RPN6_C_helix);(ZapB)_(Prot_ATP_ID_OB)_(AAA)_ (AAA_lid_3)	1	11	11	19	19	43	405	100	36	58
(RPN6_N)_(PCI)_(RPN6_C_helix);(ZapB)_(Prot_ATP_ID_OB)_(AAA)_ (AAA_lid_3)	2	6	6	19	19	43	471	100	33	32
(RPN7)_(PCI);(ZapB)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3)	1	12	12	22	22	37	850	100	33	55
(RPN7)_(PCI);(ZapB)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3)	2	8	8	22	22	37	324	100	25	36
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(RPN1_RPN2_N)_(P C_rep)_(PC_rep)_(PC_rep)_(HEAT_2)_(RPN2_C)	1	13	13	13	13	74	685	100	8	100
(Homeodomain)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome _A_N)_(Proteasome)	1	11	11	11	11	60	297	100	27	100
(Homeodomain)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome _A_N)_(Proteasome)	2	11	11	11	11	52	644	100	27	100
(Metallophos_2);(Vps35)	1	8	8	9	9	43	1228	100	50	89
(Vps26);(Vps35)	1	5	7	5	7	46	782	100	86	100
(Proteasom_Rpn13);(ubiquitin)	1	5	8	5	8	32	462	100	0	100
(GTP_EFTU)_(GTP_EFTU_D2)_(RF3_C);(Ribosom_S12_S23)	1	8	9	8	9	72	447	100	11	100
(PCRF)_(RF-1);(Ribosomal_L11_N)_(Ribosomal_L11)	1	6	6	8	10	43	268	100	33	75
(Apocytochr_F_N)_(Apocytochr_F_C);(Cytochrom_B_C)	1	5	7	5	14	57	1143	100	100	100
(Cytochrom_B_C);(Cytochrome_B)	1	5	14	5	14	74	3094	100	100	100
(RRM_1);(Torus)_(RRM_1)	1	17	17	17	17	21	1805	100	6	100
(Arabino_trans_N)_(Arabinose_trans)_(Arabino_trans_C);(PP-bi nding)	1	7	7	7	7	41	842	100	0	100
(BBS1);(PHTB1_N)_(PHTB1_C)	1	5	5	5	5	87	2237	100	0	100
(ArfA);(PCRF)_(RF-1)	1	10	10	10	10	42	1140	100	40	100
(CENP-L);(CENP-N)	1	5	5	5	5	67	1480	100	80	100
(Phenol_Hydrox)_(YHS);(TmoB)	1	6	37	6	37	52	1322	100	100	100
(MIF4G)_(MIF4G_like)_(MIF4G_like_2);(RRM_1)	1	11	13	11	13	13	1470	100	77	100
(ArsA_ATPase);(CHD5)	1	6	7	6	7	9	516	100	57	100
(MoaE);(ThiS)	1	7	9	8	10	16	920	100	78	88
(SNAP);(Synaptobrevin)	1	5	5	7	7	9	299	100	0	71
(Synaptobrevin);(Syntaxin)_(SNARE)	1	26	29	26	30	0	1402	100	72	100
(TBP)_(TBP);(TFIIB)_(TFIIB)	1	6	8	6	8	15	1190	100	88	100
(ATP-synt);(ATP-synt_Eps)	1	103	114	103	114	10	996	100	75	100
(ATP-synt_DE_N);(ATP-synt_Eps)	1	82	83	82	83	12	1037	100	70	100
(Mt_ATP-synt_B);(Mt_ATP-synt_D)	1	43	43	44	44	3	1393	100	35	98
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(ATP-synt_D)	1	19	22	20	26	26	650	100	45	95
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(ATP-synt_D)	2	19	22	20	26	26	453	100	45	95
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(ATP-synt_D)	3	18	21	20	26	26	425	100	38	90
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(V-ATPase_G)	1	10	10	10	10	64	228	100	0	100
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(vATP-synt_E)	1	19	19	20	20	15	1503	95	26	95
(ATP_synth_reg);(ATP-synt_A)	1	18	18	24	24	62	390	100	28	75
(ATP-synt_8);(ATP-synt_A)	1	25	25	25	25	4	927	100	24	100
(ATP-synt_8);(Mit_proteolip)	1	10	10	20	20	4	599	100	50	50
(ATP-synt_8);(Mt_ATP-synt_B)	1	7	7	23	23	89	294	100	57	30
(ATP-synt_A);(Mit_proteolip)	1	10	10	20	20	62	580	100	50	50
(ATP-synt_A);(WRW)	1	20	20	25	25	32	691	100	25	80
(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C);(IATP)	1	11	11	20	20	25	425	100	36	55
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(IATP)	1	23	23	23	23	16	684	100	17	100
(ATP-synt_E);(ATP-synt_G)	1	20	20	20	20	88	646	100	30	100
(ATP-synt_E);(Mt_ATP-synt_B)	1	10	10	20	20	3	258	100	50	50
(ATP-synt_F6);(Mt_ATP-synt_B)	1	17	17	25	25	4	1255	100	41	68
(ATP-synt_F6);(Mt_ATP-synt_D)	1	14	14	23	23	87	404	100	50	61
(ATP-synt_G);(Mt_ATP-synt_B)	1	19	19	20	20	3	456	100	26	95
(ATP-synt_G);(WRW)	1	10	10	20	20	32	500	100	50	50
(Mt_ATP-synt_B);(WRW)	1	20	20	25	25	1	557	100	30	80
(ATP-synt);(ATP-synt_DE_N)_(ATP-synt_DE)	1	56	67	61	72	5	1263	100	42	92
(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C);(ATP-synt_DE_N )_(ATP-synt_DE)	1	15	16	32	33	5	318	88	12	47
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(ATP-synt_DE_N )_(ATP-synt_DE)	1	14	14	32	33	38	317	100	14	44
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(ATP-synt_DE_N )_(ATP-synt_DE)	2	11	11	32	33	38	450	100	18	34
(ATP-synt_C);(ATP-synt_DE_N)_(ATP-synt_DE)	1	22	23	30	31	5	248	96	4	73
(ATP-synt_C);(ATP-synt_DE_N)_(ATP-synt_DE)	2	21	22	30	31	17	250	95	5	70
(ATP-synt_DE_N)_(ATP-synt_DE);(ATP-synt_Eps)	1	16	26	21	31	21	677	100	85	76
(ATP1G1_PLM_MAT8);(Na_K-ATPase)	1	7	40	8	43	29	360	100	100	88
(Neur_chan_LBD);(Toxin_8)	1	6	9	8	11	34	453	100	89	75
(Neur_chan_LBD);(Toxin_8)	2	6	9	8	11	34	439	100	89	75
(Neur_chan_LBD);(Toxin_TOLIP)	1	6	13	6	15	4	657	100	46	100
(NHase_alpha);(NHase_beta)	1	9	56	9	57	7	3159	100	98	100
(NHase_alpha);(NHase_beta)	2	5	31	9	57	29	296	13	58	56
(B1);(V-set)_(C1-set)	1	6	18	6	18	60	642	100	11	100
(B56);(STPPase_N)_(Metallophos)	1	5	6	5	6	67	887	100	50	100
(OTCace_N)_(OTCace);(PyrI)_(PyrI_C)	1	6	63	7	77	45	670	100	98	86
(Phage_sheath_1)_(Phage_sheath_1C);(Phage_T4_gp19)	1	5	5	5	5	46	652	100	40	100
(eRF1_1)_(eRF1_2)_(eRF1_3);(Ribosom_S12_S23)	1	5	5	5	5	34	342	100	0	100
(Ribosom_S12_S23);(RLI)_(Fer4)_(ABC_tran)_(ABC_tran)	1	7	7	7	7	43	472	100	14	100
(Ribosomal_L10)_(RL10P_insert)_(Ribosomal_60s);(Ribosomal_L1 1_N)_(Ribosomal_L11)	1	9	9	9	9	25	267	100	0	100
(Ribosomal_L13);(Ribosomal_L14e)	1	26	26	26	26	4	926	100	12	100
(Ribosomal_L14e);(Ribosomal_L6)_(Ribosomal_L6)	1	5	5	5	5	27	227	100	20	100
(Ribosomal_L19e);(Ribosomal_S17_N)_(Ribosomal_S17)	1	8	8	18	18	58	271	100	0	44
(Ribosomal_L28e);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	78	78	79	79	87	500	99	1	99
(Ribosomal_L32e);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	68	68	71	71	87	227	99	1	96
(Ribosomal_L35Ae);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	83	83	83	83	41	870	99	1	100
(Ribosomal_L4)_(Ribos_L4_asso_C);(Ribosomal_L6e_N)_(Ribosoma l_L6e)	1	76	76	77	77	44	352	99	1	99
(Ribosomal_L6)_(Ribosomal_L6);(RLI)_(Fer4)_(ABC_tran)_(ABC_t ran)	1	8	8	8	8	51	291	100	0	100
(CSN8_PSD8_EIF3K);(PCI)	2	7	8	15	16	3	1498	100	38	47
(eIF-1a);(Ribosom_S12_S23)	1	33	33	33	33	8	388	97	18	100
(eIF-1a);(Ribosomal_S19)	1	5	5	5	5	24	352	100	0	100
(eIF-3_zeta);(Ribosomal_S28e)	1	9	9	9	9	60	545	100	0	100
(eIF-3_zeta);(Ribosomal_S7)	1	9	9	9	9	60	721	100	0	100
(eIF-3c_N)_(PCI);(PCI)	1	8	8	10	10	14	1704	100	38	80
(eIF-3c_N)_(PCI);(Ribosomal_S27e)	1	13	13	14	14	28	572	100	15	93
(GTP_EFTU)_(GTP_EFTU_D2)_(eIF2_C);(S1)_(EIF_2_alpha)	1	17	17	17	17	25	688	100	24	100
(BH3);(BH4)_(Bcl-2)	1	5	7	5	7	9	987	100	86	100
(BIR);(Nbl1_Borealin_N)	1	5	6	5	6	88	1238	100	100	100
(Peptidase_C12);(ubiquitin)	1	7	9	7	9	19	1114	100	89	100
(Pescadillo_N)_(BRCT_2);(Ribosomal_L30_N)_(Ribosomal_L30)	1	13	13	13	13	89	1275	100	15	100
(Bot1p);(Ribosomal_S16)	1	7	7	7	7	23	1603	86	0	100
(Bot1p);(Ribosomal_S5)_(Ribosomal_S5_C)	1	7	7	7	7	23	978	86	0	100
(Bot1p);(Ribosomal_S8)	1	7	7	7	7	23	296	86	0	100
(DAP3);(Ribosomal_S13)	1	7	7	7	7	23	455	86	0	100
(ECH_2);(MRP-S25)	1	7	7	7	7	36	446	86	0	100
(ECH_2);(Ribosomal_S2)	1	8	8	8	8	24	561	88	0	100
(KOW);(Mitoc_mL59)	1	9	9	9	9	24	1009	89	11	100
(KOW);(MRP-L47)	1	9	9	9	9	24	1377	89	11	100
(L31);(Ribosomal_L16)	1	9	9	9	9	40	707	89	11	100
(L31);(Ribosomal_L30)	1	10	10	10	10	22	915	90	10	100
(L51_S25_CI-B8);(MRP-L20)	1	9	9	9	9	24	455	89	11	100
(Mit_ribos_Mrp51);(MRP-S25)	1	7	7	7	7	22	3228	86	0	100
(Mit_ribos_Mrp51);(Ribosomal_S18)	1	7	7	7	7	22	1384	86	0	100
(Mit_ribos_Mrp51);(Ribosomal_S2)	1	7	7	7	7	22	1214	86	0	100
(Mit_ribos_Mrp51);(Ribosomal_S21)	1	7	7	7	7	22	398	86	0	100
(Mit_ribos_Mrp51);(Sod_Fe_N)_(Sod_Fe_C)	1	7	7	7	7	22	589	86	0	100
(Mitoc_mL59);(Ribosomal_L27A)	1	9	9	9	9	33	854	89	11	100
(Mitoc_mL59);(Ribosomal_L33)	1	10	10	10	10	26	657	90	10	100
(MRP-L20);(Ribosomal_L21p)	1	9	9	9	9	24	1024	89	11	100
(MRP-L20);(Ribosomal_L22)	1	9	9	9	9	24	613	89	11	100
(MRP-L28);(Ribosomal_L31)	1	9	9	9	9	22	881	89	11	100
(MRP-L28);(Ribosomal_L5)_(Ribosomal_L5_C)	1	9	9	9	9	22	2239	89	11	100
(MRP-S25);(Ribosomal_S18)	1	7	7	7	7	27	610	86	0	100
(MRP-S25);(Ribosomal_S2)	1	7	7	7	7	36	2213	86	0	100
(MRP-S25);(Ribosomal_S5)_(Ribosomal_S5_C)	1	7	7	7	7	36	436	86	0	100
(MRP-S25);(Ribosomal_S8)	1	7	7	7	7	36	878	86	0	100
(MRP-S25);(Sod_Fe_N)_(Sod_Fe_C)	1	7	7	7	7	25	1344	86	0	100
(Ribosomal_S2);(Sod_Fe_N)_(Sod_Fe_C)	1	7	7	7	7	25	1234	86	0	100
(Botulinum_HA-17);(RicinB_lectin_2)_(RicinB_lectin_2)	1	5	10	5	10	34	666	100	100	100
(Botulinum_HA-17);(RicinB_lectin_2)_(RicinB_lectin_2)	2	5	10	5	10	34	420	100	100	100
(Peptidase_C48);(Rad60-SLD)	1	12	14	12	15	14	1026	100	86	100
(Ribosomal_L14e);(Ribosomal_L6e)	1	5	5	5	5	21	507	100	20	100
(Ribosomal_L23);(Ribosomal_L39)	1	11	71	11	71	34	276	100	1	100
(MPP6);(Rrp40_N)_(KH_6)	1	7	7	7	7	12	1379	100	14	100
(Peptidase_M10);(TIMP)	1	9	11	9	11	39	1081	100	91	100
(Brix);(RRS1)	1	8	8	8	8	34	2440	100	50	100
(TFIID_NTD2)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40);(TFII D-31kDa)	1	5	5	5	5	65	1202	100	0	100
(DIM1);(Nop)_(Prp31_C)	1	10	10	10	10	25	414	100	50	100
(Nop)_(Prp31_C);(Ribosomal_L7Ae)	1	10	10	10	10	25	502	100	50	100
(PRP4)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40);(Rib osomal_L7Ae)	1	8	8	8	8	32	712	100	50	100
(CBF_beta);(Runt)	1	5	13	5	13	10	1085	100	100	100
(Peptidase_S8);(potato_inhibit)	1	10	28	11	29	35	806	100	100	91
(ig)_(ig)_(ig);(MHC_I)_(C1-set)	1	7	8	7	9	88	923	88	50	100
(ig)_(ig)_(ig);(MHC_I)_(C1-set)	2	7	8	7	9	88	599	12	25	100
(ig)_(ig)_(ig);(MHC_I)_(C1-set)	3	7	8	7	9	88	375	0	0	100
(ig)_(ig)_(ig);(MHC_I)_(C1-set)	4	7	8	7	9	88	597	0	0	100
(ig)_(ig)_(ig);(MHC_I)_(C1-set)	5	6	7	7	9	88	268	0	0	86
(Ig_J_chain);(V-set)_(V-set)_(V-set)_(V-set)	1	9	9	9	9	67	429	100	0	100
(PhdYeFM_antitox);(YoeB_toxin)	1	9	9	9	9	25	1582	100	100	100
(Phe_tRNA-synt_N)_(tRNA-synt_2d);(tRNA_bind)_(B3_4)_(B5)_(tR NA_synthFbeta)_(FDX-ACB)	1	7	23	9	27	13	1826	100	96	78
(DUF5089);(Synaptobrevin)	1	11	14	15	19	10	319	100	93	73
(DUF5089);(Syntaxin)_(SNARE)	1	18	21	19	23	6	1501	100	95	95
(DUF5089);(TolA_bind_tri)	1	9	12	9	13	10	1430	100	92	100
(Syntaxin)_(SNARE);(TolA_bind_tri)	1	9	12	9	13	19	354	100	83	100
(Synaphin);(Synaptobrevin)	1	6	6	6	6	52	321	100	67	100
(Synaphin);(Syntaxin)_(SNARE)	1	6	6	6	6	10	271	100	67	100
(Phe_tRNA-synt_N)_(tRNA-synt_2d);(tRNA_bind)_(B3_4)_(B5)_(tR NA_synthFbeta)_(FDX-ACB)	2	6	20	9	27	13	3622	100	95	67
(VEFS-Box);(WD40)_(WD40)_(WD40)_(WD40)	1	9	12	9	12	17	640	100	50	100
(EZH2_WD-Binding)_(PRC2_HTH_1)_(preSET_CXC)_(SET);(VEFS-Box)	1	7	10	7	10	17	2621	100	70	100
(HRM)_(7tm_2);(RAMP)	1	6	6	6	6	40	1919	100	0	100
(Calici_coat);(CRPV_capsid)	1	29	30	29	30	7	4513	100	23	100
(Calici_coat);(Waikav_capsid_1)	1	5	6	5	6	21	1270	100	17	100
(CRPV_capsid);(Waikav_capsid_1)	1	6	7	6	7	18	1178	100	14	100
(HAV_VP);(Rhv)	1	14	15	14	15	5	1257	100	13	100
(HAV_VP);(Rhv)	2	11	11	14	15	7	3398	100	0	79
(Calici_coat)_(Calici_coat_C);(V-set)	1	5	5	20	24	56	725	100	100	25
(Ras);(RBD-FIP)	1	7	7	9	10	35	521	100	71	78
(EF-hand_7)_(EF-hand_7);(KCNQ_channel)	1	5	7	6	8	29	1527	100	100	83
(Pico_P1A)_(Rhv);(Rhv)	1	16	21	16	21	10	1731	95	10	100
(Pico_P1A)_(Rhv);(Rhv)	2	14	17	16	21	10	2059	94	6	88
(Reovirus_L2);(Sigma_1_2)	1	6	6	6	6	21	416	100	17	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5);(Sigma70_r1_2)_(Sigma70_r2)_(Sigma7 0_r3)_(Sigma70_r4)	1	20	53	20	53	35	2594	100	45	100
(Cas_Cas5d);(Cas_CT1975)	1	8	9	8	9	30	2029	100	78	100
(Cas_Cmr3);(RAMPs)	1	8	8	8	8	24	1104	100	88	100
(Cas_Cmr5);(RAMPs)	1	8	8	8	8	21	521	100	88	100
(Cas_Cmr5);(RAMPs)	2	8	8	8	8	21	289	100	88	100
(Plexin_cytopl);(Ras)	1	5	5	7	7	40	676	100	100	71
(Polyketide_cyc2);(PP2C)	1	10	22	16	36	39	869	95	91	62
(potato_inhibit);(Trypsin)	1	6	8	6	8	33	837	100	100	100
(CCDC23);(Vasohibin)	1	17	23	17	23	3	1216	100	96	100
(DNA_pol_B_exo1)_(DNA_pol_B)_(zf-C4pol);(PCNA_N)_(PCNA_C)	1	6	6	6	6	36	1034	100	83	100
(Sld5);(SLD5_C)	1	6	6	6	6	37	1716	100	100	100
(CDC50);(PhoLip_ATPase_N)_(E1-E2_ATPase)_(Cation_ATPase)_(Ph oLip_ATPase_C)	1	15	15	15	15	37	3850	100	7	100
(CDI);(Pkinase)	1	7	8	8	10	35	1104	100	100	88
(CKS);(Pkinase)	1	9	13	9	13	65	710	100	62	100
(CENP-S);(CENP-X)	1	13	16	13	16	10	2300	100	100	100
(CENP-S);(CENP-X)	2	5	5	13	16	65	221	0	0	38
(Spc24);(Spindle_Spc25)	1	6	6	6	6	10	1284	100	83	100
(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C);(Ribosom al_L11_N)_(Ribosomal_L11)	1	10	10	15	15	22	247	100	0	67
(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C);(Ribosom al_L12_N)_(Ribosomal_L12)	1	6	6	7	7	30	300	100	0	86
(Ribosom_S12_S23);(RRF)	1	7	9	7	9	10	434	100	0	100
(Chloroa_b-bind);(Photo_RC)	1	7	7	7	7	55	249	100	14	100
(Chloroa_b-bind);(PsbH)	1	7	7	7	7	55	520	100	14	100
(Chloroa_b-bind);(PSII)	1	7	7	8	8	55	862	100	14	88
(Chloroa_b-bind);(PSII)	2	5	5	8	8	52	238	100	0	62
(Chloroa_b-bind);(Ycf9)	1	8	8	8	8	52	300	100	0	100
(MSP);(PsbQ)	1	7	7	7	7	11	274	100	0	100
(MSP);(PsbW)	1	8	8	8	8	38	495	100	12	100
(Photo_RC);(PsbW)	1	11	11	11	11	26	476	100	9	100
(PsbI);(PsbW)	1	11	11	11	11	9	796	100	0	100
(PsbQ);(PSII)	1	8	8	8	8	11	1402	100	0	100
(PsbW);(PSII)	1	11	11	11	11	26	790	100	9	100
(Ras);(RasGEF_N)_(RasGEF)	1	7	48	9	58	17	1628	100	52	78
(Ion_trans)_(Ion_trans)_(Ion_trans)_(Ion_trans)_(GPHH)_(Ca_c han_IQ);(VWA_N)_(VWA_3)_(VGCC_alpha2)	1	12	12	12	12	70	1822	100	25	100
(Ion_trans)_(Ion_trans)_(Ion_trans)_(Ion_trans)_(GPHH)_(Ca_c han_IQ);(VGCC_beta4Aa_N)_(Guanylate_kin)	1	5	5	5	5	82	1073	100	20	100
(Rieske)_(Ring_hydroxyl_A);(Ring_hydroxyl_B)	1	11	38	14	51	20	1746	100	95	79
(Rieske)_(Ring_hydroxyl_A);(Ring_hydroxyl_B)	2	8	13	14	51	24	289	100	100	57
(RIP);(SLT_beta)	1	5	9	6	10	13	495	100	100	83
(RIP);(SLT_beta)	2	5	9	6	10	13	395	100	100	83
(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_ Rpb2_2)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_ (RNA_pol_Rpb2_7);(RNA_pol_Rpb6)	1	61	78	68	85	26	235	100	8	90
(Como_LCP);(Como_SCP)	1	9	11	9	12	37	1792	100	55	100
(QCR10);(UCR_14kD)	1	5	5	5	5	70	333	100	60	100
(QCR10);(UCR_UQCRX_QCR9)	1	5	5	5	5	81	624	100	60	100
(COX1);(COX2_TM)_(COX2)_(COX_ARM)	1	5	5	5	5	31	3284	100	80	100
(Cpn10);(Cpn60_TCP1)	1	14	20	15	21	11	414	100	80	93
(Prefoldin);(Prefoldin_2)	1	7	7	7	7	18	814	100	29	100
(Prefoldin);(Prefoldin_2)	2	7	7	7	7	19	758	100	29	100
(CsgF);(CsgG)	1	5	5	6	6	10	228	100	0	83
(CsgF);(CsgG)	2	5	5	6	6	10	1023	100	0	83
(CsgF);(CsgG)	3	5	5	6	6	10	377	100	0	83
(JAB)_(CSN5_C);(PCI)_(CSN4_RPN5_eIF3a)	1	5	6	5	6	67	509	100	50	100
(PCI);(RPN7)_(PCI)	1	5	6	5	6	3	2024	100	50	100
(PCI)_(CSN4_RPN5_eIF3a);(PCI)_(CSN7a_helixI)	1	5	6	5	6	60	941	100	50	100
(DSS1_SEM1);(PCI)	1	6	6	6	6	21	2173	100	100	100
(Squash);(Trypsin)	1	8	10	9	11	35	810	100	100	89
(Cullin_binding);(Cullin_Nedd8)	1	5	5	5	5	27	553	60	0	100
(Ribosomal_S10);(Ribosomal_S3_C)	1	6	6	6	6	76	551	100	67	100
(T2SSI);(T2SSJ)	1	6	6	6	6	24	735	100	100	100
(DEAD_2)_(HBB)_(Helicase_C_2);(zf-C3HC4_5)_(MAT1)	1	7	7	7	7	30	782	100	14	100
(Med11);(Med17)	1	10	10	12	12	8	1175	100	30	83
(Med11);(Med18)	1	6	6	6	6	11	369	100	33	100
(Med11);(Med22)	1	11	11	11	11	5	1557	100	36	100
(Med11);(Med8)	1	5	5	5	5	21	893	100	40	100
(Med17);(Med22)	1	11	11	12	12	8	1140	100	27	92
(Med17);(Med8)	1	8	8	9	9	6	1250	100	25	89
(Med18);(Med20)	1	13	13	13	13	5	1394	100	38	100
(Med18);(Med8)	1	9	9	9	9	11	607	100	22	100
(Med31);(Med7)	1	7	8	7	8	25	969	100	38	100
(CytoC_RC);(Photo_RC)	1	14	32	14	44	21	1655	100	91	100
(CytoC_RC);(Photo_RC)	2	14	32	14	44	21	2502	100	94	100
(OST3_OST6);(STT3)	1	7	7	7	7	8	2013	100	43	100
(Ost4);(STT3)	1	7	7	7	7	35	1553	100	43	100
(ThiF)_(E1_FCCH)_(E1_4HB)_(ThiF)_(ThiF)_(UBA_e1_thiolCys)_(T hiF)_(E1_UFD);(ubiquitin)	1	11	14	12	15	10	1605	100	100	92
(DDA1);(MMS1_N)_(CPSF_A)	1	5	5	6	8	60	2363	100	80	83
(DCP1);(DCP2)_(NUDIX)	1	9	10	9	10	19	1074	100	70	100
(DCP1);(PNRC)	1	6	7	7	8	19	788	100	100	86
(DDDD);(MCU)	1	9	9	9	9	12	624	100	0	100
(DDDD);(MCU)	2	8	8	9	9	87	799	100	0	89
(LSM);(U1snRNP70_N)_(RRM_1)	1	7	7	7	7	22	303	100	14	100
(LSM);(zf-U1)	1	7	7	7	7	38	664	100	14	100
(ECR1_N)_(EXOSC1);(RNase_PH)	1	14	14	14	14	18	1019	100	64	100
(ECR1_N)_(EXOSC1);(RNase_PH)_(RNase_PH_C)	1	11	13	11	13	14	762	100	85	100
(ECR1_N)_(EXOSC1);(Rrp40_N)_(KH_6)	1	13	13	13	13	28	444	100	69	100
(ECR1_N)_(EXOSC1)_(KH_6);(RNase_PH)_(RNase_PH_C)	1	12	12	12	12	23	1423	100	67	100
(ECR1_N)_(EXOSC1)_(KH_6);(RNase_PH)_(RNase_PH_C)	2	12	12	12	12	34	1180	100	67	100
(TBP)_(TBP);(TFIIA)	1	11	12	11	12	50	343	100	25	100
(TNF);(TNFR_c6)_(TNFR_c6)	1	5	5	7	7	53	784	100	100	71
(TNF);(TNFR_c6)_(TNFR_c6)	2	5	5	7	7	53	801	80	100	71
(TNF);(TNFR_c6)_(TNFR_c6)_(TNFR_c6)_(TNFR_c6)	1	8	10	8	11	19	609	100	80	100
(TNF);(TNFR_c6)_(TNFR_c6)_(TNFR_c6)_(TNFR_c6)	2	8	10	8	11	19	491	100	80	100
(Cytochrom_C1);(Cytochrome_B)_(Cytochrom_B_C)	1	54	95	54	99	0	1603	100	69	100
(Cytochrom_C1);(UCR_14kD)	1	40	75	43	81	23	395	100	76	93
(Cytochrom_C1);(UCR_hinge)	1	44	79	44	82	2	1087	100	72	100
(Cytochrom_C1);(UCR_UQCRX_QCR9)	1	41	75	44	82	0	838	100	75	93
(Cytochrom_C1);(UcrQ)	1	42	78	42	80	0	734	100	73	100
(Cytochrome_B)_(Cytochrom_B_C);(UCR_14kD)	1	44	80	44	82	23	1262	100	71	100
(DHR-2);(Ras)	1	7	10	8	11	18	2041	100	100	88
(Cytochrome_B)_(Cytochrom_B_C);(UcrQ)	1	42	78	42	80	4	1008	100	74	100
(Peptidase_M16)_(Peptidase_M16_C);(UCR_UQCRX_QCR9)	1	28	47	40	78	26	274	100	74	70
(Peptidase_M16)_(Peptidase_M16_C);(UcrQ)	1	42	77	42	80	21	826	100	74	100
(UCR_14kD);(UcrQ)	1	38	73	41	79	17	464	100	78	93
(UCR_hinge);(UcrQ)	1	18	40	27	59	62	316	100	78	67
(CHCH);(GRIM-19)	1	56	56	56	56	22	1708	100	14	100
(CHCH);(MWFE)	1	56	56	56	56	21	941	100	14	100
(CHCH);(NADHdh)	1	36	36	49	49	57	257	100	19	73
(DNA_primase_lrg);(DNA_primase_S)	1	5	7	5	7	7	845	71	57	100
(HTH_9)_(RNA_pol_Rpc82)_(TFIIE_alpha);(RNA_pol_3_Rpc31)	1	16	16	16	16	66	1616	100	62	100
(RNA_pol_A_bac);(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_R pb1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)	1	15	15	16	16	28	769	100	67	94
(Myb_DNA-bind_7);(TBP)_(TBP)	1	6	6	6	6	29	620	100	83	100
(RNA_pol_I_A49);(RNA_polI_A34)	1	31	35	31	35	38	2028	100	83	100
(UQ_con);(zf-C3HC4_3)	1	10	10	11	12	26	512	100	40	91
(UCH);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(DUF3337)	1	8	9	8	9	32	733	100	0	100
(DNA_topoisoIV);(Toprim)_(DNA_gyraseB_C)	1	11	39	11	39	42	1390	100	72	100
(DNA_topoisoIV);(Toprim)_(DNA_gyraseB_C)	2	10	38	11	39	42	609	100	71	91
(UDG);(UDI)	1	8	9	10	12	41	1052	100	100	80
(Sec61_beta);(Sec66)	1	5	5	17	17	26	407	100	0	29
(NMD3);(Ribosomal_L44)	1	14	14	15	15	44	568	100	29	93
(Ribosomal_L22);(zf-C2H2_2)	1	8	8	8	8	33	475	100	100	100
(Ribosomal_L39);(zf-C2H2_2)	1	8	8	8	8	33	362	100	100	100
(Ribosomal_L4)_(Ribos_L4_asso_C);(zf-C2H2_2)	1	6	6	6	6	34	246	100	100	100
(DUF1077);(EMC1_C)	1	5	5	6	6	21	1396	100	40	83
(DUF1077);(EMC3_TMCO1)	1	5	5	6	6	23	484	100	40	83
(EMC1_C);(EMC3_TMCO1)	1	6	6	7	7	21	1650	100	33	86
(EMC1_C);(TPR_19)	1	5	5	6	6	13	396	100	40	83
(EMC3_TMCO1);(EMC6)	1	6	6	7	7	23	976	100	33	86
(EMC3_TMCO1);(TPR_19)	1	6	6	6	6	13	1404	100	33	100
(TPR_19);(UPF0172)	1	5	5	5	5	45	1069	100	60	100
(Ribosomal_L23eN)_(Ribosomal_L23);(SecE)	1	6	6	8	8	63	232	100	17	75
(40S_SA_C);(Ribosomal_S17e)	1	8	8	8	8	52	1268	100	12	100
(40S_SA_C);(Ribosomal_S21e)	1	8	8	8	8	51	1506	100	12	100
(40S_SA_C);(Ribosomal_S5)_(Ribosomal_S5_C)	1	8	8	8	8	52	518	100	12	100
(Gtr1_RagA);(LAMTOR)	1	5	5	7	7	10	714	100	40	71
(Ribosomal_S24e);(RS4NT)_(Ribosomal_S4e)_(KOW)_(40S_S4_C)	1	5	5	5	5	53	584	100	0	100
(Ribosomal_S6e);(RS4NT)_(Ribosomal_S4e)_(KOW)_(40S_S4_C)	1	5	5	5	5	54	373	100	0	100
(RS4NT)_(Ribosomal_S4e)_(KOW)_(40S_S4_C);(S4)	1	5	5	5	5	57	357	100	0	100
(DUF3585);(Ras)	1	6	7	6	7	27	862	100	86	100
(ArenaCapSnatch)_(Arena_RNA_pol);(zf-P11)	1	5	5	7	7	77	912	100	0	71
(DUF5601)_(VPS9);(Ras)	1	5	7	5	7	24	1042	100	100	100
(COX1);(Cytochrom_B_N_2)	1	6	6	6	6	83	905	100	17	100
(COX3);(Cytochrom_B_N_2)	1	6	6	6	6	83	660	100	17	100
(Cyt_c_ox_IV);(Cytochrom_B_N_2)	1	6	6	6	6	83	933	100	17	100
(Cytochrom_B_N_2);(Cytochrom_C)_(Cytochrome_CBB3)	1	6	6	6	6	79	2300	100	17	100
(Cytochrom_B_N_2);(DUF2631)	1	6	6	6	6	83	1674	100	17	100
(Cytochrom_B_N_2);(QcrA_N)_(Rieske)	1	6	6	6	6	80	810	100	17	100
(Cytochrom_B_N_2);(QcrA_N)_(Rieske)	2	6	6	6	6	80	4584	100	17	100
(EccE);(YukD)_(EccD)	1	5	5	5	5	13	611	100	60	100
(Gla)_(EGF)_(FXa_inhibition);(Trypsin)	1	8	76	8	76	38	904	95	97	100
(EF-hand_7);(Shal-type)_(BTB_2)_(Ion_trans)_(DUF3399)	1	5	5	5	5	68	1394	100	0	100
(EF-hand_7);(Shal-type)_(BTB_2)_(Ion_trans)_(DUF3399)	2	5	5	5	5	68	1812	100	0	100
(EGF);(Recep_L_domain)_(Furin-like)_(Recep_L_domain)_(GF_rec ep_IV)_(PK_Tyr_Ser-Thr)	1	9	9	9	9	23	1464	100	0	100
(KH_2)_(Ribosomal_S3_C);(Stm1_N)_(HABP4_PAI-RBP1)	1	24	37	24	37	4	801	41	5	100
(Ribosomal_60s);(Ribosomal_L10)_(RL10P_insert)_(Ribosomal_60 s)	1	5	5	5	5	10	786	80	20	100
(Ribosomal_L5)_(Ribosomal_L5_C);(Stm1_N)_(HABP4_PAI-RBP1)	1	24	37	24	37	74	571	41	5	100
(Ribosomal_L7Ae);(Stm1_N)_(HABP4_PAI-RBP1)	1	12	25	21	34	77	260	32	0	57
(Ribosomal_S13);(Stm1_N)_(HABP4_PAI-RBP1)	1	24	37	24	37	74	533	41	5	100
(Ribosomal_S19);(Stm1_N)_(HABP4_PAI-RBP1)	1	24	37	24	37	10	418	41	5	100
(Ribosomal_S5)_(Ribosomal_S5_C);(Stm1_N)_(HABP4_PAI-RBP1)	1	24	37	24	37	74	252	41	5	100
(S10_plectin);(Stm1_N)_(HABP4_PAI-RBP1)	1	5	7	8	10	82	205	57	14	62
(Ribosomal_L5)_(Ribosomal_L5_C);(Stm1_N)	1	9	9	9	9	56	529	33	0	100
(Ribosomal_L7Ae);(Stm1_N)	1	6	6	8	8	87	276	50	0	75
(Ribosomal_S13);(Stm1_N)	1	9	9	9	9	56	482	33	0	100
(Ribosomal_S19);(Stm1_N)	1	9	9	9	9	56	422	33	0	100
(EGF)_(FXa_inhibition);(Trypsin)	1	11	32	11	32	10	878	100	100	100
(eIF_4EBP);(IF4E)	1	10	13	13	20	0	1056	100	100	77
(HVO_2753_ZBP);(Ribosomal_S2)	1	7	7	7	7	84	786	100	29	100
(HVO_2753_ZBP);(Ribosomal_S5)_(Ribosomal_S5_C)	1	7	7	7	7	84	727	100	29	100
(Ran_BP1);(Ras)	1	14	61	14	67	22	2087	100	93	100
(IF-2B);(S1)_(LZ3wCH)_(EIF_2_alpha)	1	9	10	9	10	47	874	100	60	100
(Ribosomal_L21e);(Ribosomal_L5e)	1	13	73	13	73	21	526	100	1	100
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_L5e)	1	11	71	11	71	38	225	100	1	100
(Ribosomal_L28e);(Ribosomal_L6e)	1	6	6	6	6	21	444	100	17	100
(FtsK_SpoIIIE)_(FtsK_SpoIIIE)_(FtsK_SpoIIIE);(T7SS_ESX1_EccB )	1	6	6	6	6	75	667	100	17	100
(FtsK_SpoIIIE)_(FtsK_SpoIIIE)_(FtsK_SpoIIIE);(YukD)_(EccD)	1	7	7	7	7	72	1633	100	29	100
(FtsK_SpoIIIE)_(FtsK_SpoIIIE)_(FtsK_SpoIIIE);(YukD)_(EccD)	2	7	7	7	7	72	1021	100	29	100
(Ephrin);(HN)	1	5	5	8	8	26	1335	100	100	62
(eRF1_1)_(eRF1_2)_(eRF1_3);(HBS1_N)_(GTP_EFTU)_(GTP_EFTU_D2) _(GTP_EFTU_D3)	1	7	7	7	7	30	1763	100	0	100
(HBS1_N)_(GTP_EFTU)_(GTP_EFTU_D2)_(GTP_EFTU_D3);(Ribosom_S12 _S23)	1	5	5	5	5	33	322	100	0	100
(KOW)_(Ribosomal_L14e);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	62	62	62	62	4	464	98	0	100
(PPTA)_(PPTA)_(PPTA)_(PPTA)_(PPTA);(Prenyltrans)_(Prenyltran s)_(Prenyltrans)_(Prenyltrans)_(Prenyltrans)	1	5	75	5	75	19	3038	93	100	100
(FGF);(I-set)_(I-set)	1	12	15	12	15	17	1383	100	100	100
(FG-GAP)_(FG-GAP)_(FG-GAP)_(Integrin_alpha2);(PSI_integrin)_ (Integrin_beta)_(I-EGF_1)	1	6	7	6	7	44	1764	100	86	100
(PapC_N)_(Usher)_(PapC_C);(PapD_N)_(PapD_C)	1	5	5	5	5	26	1039	100	60	100
(FKBP_C);(FRB_dom)	1	8	12	8	12	40	365	100	25	100
(Flavi_glycop_C);(V-set)_(V-set)	1	6	6	6	6	46	914	100	0	100
(Flavi_NS2B);(Peptidase_S7)_(Flavi_DEAD)	1	5	7	6	9	68	1429	100	14	83
(fn3);(HH_signal)	1	5	6	5	6	74	667	100	17	100
(RGM_N);(TGF_beta)	1	8	8	8	9	37	553	88	88	100
(RGM_N);(TGF_beta)	2	8	8	8	9	37	415	88	88	100
(C1-set);(MHC_I)_(C1-set)	1	518	1066	519	1150	8	1249	100	93	100
(C1-set);(MHC_I)_(C1-set)	2	41	98	519	1150	18	258	0	3	8
(C1-set);(MHC_I)_(C1-set)	3	30	45	519	1150	23	269	0	9	6
(Furin-like_2);(ZNRF_3_ecto)	1	9	9	9	9	9	1004	100	89	100
(C1-set);(MHC_I)_(C1-set)	4	28	69	519	1150	83	263	0	0	5
(C1-set);(MHC_I)_(C1-set)	5	25	63	519	1150	19	351	0	6	5
(C1-set);(MHC_I)_(C1-set)	6	23	57	519	1150	72	334	0	0	4
(C1-set);(MHC_I)_(C1-set)	7	19	27	519	1150	85	340	0	0	4
(C1-set);(MHC_I)_(C1-set)	9	17	50	519	1150	68	222	0	0	3
(C1-set);(MHC_I)_(C1-set)	10	17	22	519	1150	24	256	0	5	3
(C1-set);(MHC_I)_(C1-set)	11	13	173	519	1150	84	206	1	0	3
(C1-set);(MHC_I)_(C1-set)	12	13	23	519	1150	17	297	0	0	3
(C1-set);(MHC_I)_(C1-set)	13	13	19	519	1150	65	240	0	0	3
(C1-set);(MHC_I)_(C1-set)	14	13	20	519	1150	68	367	0	0	3
(C1-set);(MHC_I)_(C1-set)	15	12	15	519	1150	65	326	0	0	2
(C1-set);(MHC_I)_(C1-set)	16	11	35	519	1150	83	532	0	3	2
(C1-set);(MHC_I)_(C1-set)	17	11	20	519	1150	67	287	0	5	2
(C1-set);(MHC_I)_(C1-set)	18	11	22	519	1150	65	433	0	0	2
(C1-set);(MHC_I)_(C1-set)	19	11	17	519	1150	68	241	0	0	2
(C1-set);(MHC_I)_(C1-set)	20	9	14	519	1150	22	309	0	14	2
(C1-set);(MHC_I)_(C1-set)	21	8	13	519	1150	42	253	0	8	2
(UQ_con);(zf-RING_2)	1	11	11	12	12	27	564	100	18	92
(C1-set);(MHC_I)_(C1-set)	22	7	9	519	1150	24	261	0	0	1
(C1-set);(MHC_I)_(C1-set)	23	7	8	519	1150	65	271	0	0	1
(C1-set);(MHC_I)_(C1-set)	24	6	12	519	1150	22	296	0	0	1
(C1-set);(MHC_I)_(C1-set)	25	6	10	519	1150	73	225	0	20	1
(C1-set);(MHC_I)_(C1-set)	27	5	30	519	1150	29	196	0	0	1
(C1-set);(MHC_I)_(C1-set)	28	5	5	519	1150	24	450	0	0	1
(C1-set);(MHC_I)_(C1-set)	29	5	5	519	1150	22	347	0	0	1
(G-alpha);(RGS)	1	9	9	9	9	33	893	100	11	100
(Ribosom_S12_S23);(Ribosomal_S17)	1	333	560	379	762	0	221	100	16	88
(Ribosomal_L13);(Ribosomal_L20)	1	433	631	434	725	0	530	100	14	100
(Ribosomal_L14);(Ribosomal_L19)	1	442	646	445	736	0	802	100	14	99
(Ribosomal_L16);(Ribosomal_L27)	1	56	151	85	265	7	250	100	3	66
(Ribosomal_L17);(Ribosomal_L32p)	1	422	622	428	715	0	378	100	14	99
(Ribosomal_L19);(Ribosomal_L3)	1	440	644	444	735	0	728	100	14	99
(Ribosomal_L20);(Ribosomal_L21p)	1	438	643	438	730	0	980	100	13	100
(Ribosomal_L22);(Ribosomal_L32p)	1	443	646	443	735	0	469	100	14	100
(Ribosomal_L27A);(Ribosomal_L35p)	1	418	610	430	721	0	808	100	12	97
(Ribosomal_L27A);(Ribosomal_L35p)	2	12	19	430	721	32	519	100	58	3
(Ribosomal_L27A);(Ribosomal_L4)	1	446	629	456	746	0	495	100	14	98
(Ribosomal_L27A);(Ribosomal_L4)	2	9	10	456	746	29	352	100	10	2
(Ribosomal_L28);(Ribosomal_L9_N)_(Ribosomal_L9_C)	1	250	408	305	558	1	235	100	11	82
(Ribosomal_L28);(Ribosomal_L9_N)_(Ribosomal_L9_C)	2	33	36	305	558	7	1394	100	14	11
(Ribosomal_S10);(Ribosomal_S14)	1	622	904	624	1022	0	789	97	14	100
(Ribosomal_S11);(Ribosomal_S18)	1	103	343	157	486	3	319	100	5	66
(Ribosomal_S11);(Ribosomal_S18)	2	29	29	157	486	27	279	100	7	18
(Ribosomal_S11);(Ribosomal_S7)	1	305	522	369	744	0	244	100	15	83
(Ribosomal_S18);(Ribosomal_S6)	1	419	687	422	807	0	906	100	10	99
(Ribosomal_S7);(Ribosomal_S9)	1	556	808	619	993	0	458	97	12	90
(Ribosomal_S7);(Ribosomal_S9)	2	32	32	619	993	78	1403	100	6	5
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_ Rpb1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_5);(RNA_pol_Rpb6)	1	7	36	7	36	77	2326	100	97	100
(Ribosomal_L23);(Ribosomal_L29)	1	416	669	416	758	0	493	100	12	100
(Ribosomal_L31);(Ribosomal_L5)_(Ribosomal_L5_C)	1	205	350	233	444	0	981	100	12	88
(Ribosomal_L31);(Ribosomal_L5)_(Ribosomal_L5_C)	2	15	17	233	444	17	833	100	6	6
(V-set)_(C1-set);(V-set_2)_(C1-set)_(C1-set)_(C1-set)	1	5	5	5	5	25	1619	100	80	100
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb 2_6)_(RNA_pol_Rpb2_7)	1	11	27	11	27	32	1870	100	70	100
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb 2_6)_(RNA_pol_Rpb2_7)	2	6	22	11	27	37	246	100	86	55
(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_III)_(EFG_IV)_(EFG_C);(Ribosom al_L10)_(RL10P_insert)_(Ribosomal_60s)	1	7	7	7	7	52	550	100	0	100
(IgG_binding_B);(V-set)_(C1-set)	1	8	8	8	8	50	528	100	12	100
(Herpes_capsid);(Herpes_MCP)	1	11	11	11	11	26	1813	100	0	100
(Herpes_capsid);(Herpes_MCP)	2	11	11	11	11	26	587	100	0	100
(Herpes_UL17);(Herpes_UL25)	1	5	5	11	11	82	1431	100	0	45
(Herpes_UL17);(Herpes_UL25)	2	5	5	11	11	82	2351	100	0	45
(Hirudin);(Trypsin)	1	5	9	11	254	87	1286	100	89	45
(MMS1_N)_(CPSF_A);(WD40)_(WD40)_(WD40)	1	8	11	8	11	49	2448	100	100	100
(Histone);(PHD)_(PHD)	1	6	11	8	15	10	937	100	82	75
(HLH)_(PAS)_(PAS_11);(HLH)_(PAS)_(PAS_3)	1	5	5	5	5	26	3866	100	100	100
(RAG1_imp_bd)_(zf-C3HC4)_(zf-RAG1)_(RAG1);(RAG2)_(RAG2_PHD)	1	14	14	14	14	52	1918	100	0	100
(RAG1_imp_bd)_(zf-C3HC4)_(zf-RAG1)_(RAG1);(RAG2)_(RAG2_PHD)	2	5	5	14	14	52	589	100	0	36
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S10)	1	565	824	581	973	0	417	97	11	97
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S14)	1	573	878	577	969	0	768	97	13	99
(Ribosomal_S13);(Ribosomal_S19)	1	593	894	602	994	0	435	97	10	99
(Ribosomal_S5)_(Ribosomal_S5_C);(Ribosomal_S8)	1	607	888	609	1001	0	578	97	13	100
(Ribosomal_L31);(Ribosomal_S13)	1	143	277	172	375	0	408	100	13	83
(Ribosomal_L31);(Ribosomal_S13)	2	7	7	172	375	49	453	100	0	4
(Ribosomal_L31);(Ribosomal_S19)	1	147	256	177	367	5	437	100	14	83
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S13)	1	209	266	365	611	24	305	100	13	57
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S13)	2	64	64	365	611	39	287	98	0	18
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S13)	3	48	74	365	611	4	308	100	1	13
(Ribosomal_S4)_(S4);(Ribosomal_S5)_(Ribosomal_S5_C)	1	322	588	372	751	0	323	100	16	87
(Ribosomal_S4)_(S4);(Ribosomal_S6)	1	29	72	62	249	28	377	4	0	47
(Ribosomal_S4)_(S4);(Ribosomal_S6)	2	8	27	62	249	10	258	0	0	13
(Actin);(Gelsolin)	1	13	35	14	42	72	1202	100	100	93
(Actin);(Gelsolin)	2	7	17	14	42	72	399	0	0	50
(Actin);(Gelsolin)	3	7	17	14	42	72	278	0	0	50
(IGFBP);(Insulin)	1	5	5	5	5	58	820	100	100	100
(IL2RB_N1)_(fn3);(IL6Ra-bind)_(fn3)	1	6	6	6	6	59	893	100	50	100
(NusG)_(KOW);(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1 _3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)	1	34	34	34	34	4	662	100	6	100
(Rad60-SLD);(UQ_con)	1	7	7	11	13	14	565	71	14	64
(JAB);(JAB)_(MitMem_reg)	1	6	7	6	8	89	1987	100	100	100
(KOW)_(Ribosomal_L14e);(KOW)_(Ribosomal_L6e)	1	10	10	10	10	21	536	100	10	100
(KOW)_(Ribosomal_L6e);(Ribosomal_L35Ae)	1	10	10	10	10	21	876	100	10	100
(Lys);(tRNA_anti-codon)	1	5	5	5	5	86	864	100	0	100
(MeMO_Hyd_G);(Phenol_Hydrox)_(YHS)	1	5	30	5	30	10	2144	100	100	100
(MHC_II_alpha)_(C1-set);(MHC2-interact)	1	5	5	10	11	15	673	100	100	50
(MHC_II_beta)_(C1-set);(MHC2-interact)	1	5	5	10	11	15	683	100	100	50
(MotA_ExbB);(MotB_plug)_(OmpA)	1	5	5	5	5	24	541	100	60	100
(Nucleoporin_C);(Nup84_Nup100)	1	5	5	5	5	5	796	100	60	100
(Pacifastin_I);(Trypsin)	1	7	7	7	7	10	902	100	100	100
(PBD);(Ras)	1	6	7	6	8	16	1127	100	71	100
(Ribosomal_L16);(Ribosomal_L25p)_(Ribosomal_TL5_C)	1	97	266	97	300	5	1098	100	9	100
(CybS);(Fer2_3)_(Fer4_17)	1	5	24	8	60	8	701	100	92	62
(CybS);(Sdh_cyt)	1	5	24	9	61	8	1428	100	92	56
(FAD_binding_2)_(Succ_DH_flav_C);(Fer2_3)_(Fer4_17)	1	5	24	8	60	48	2486	100	92	62
(Fer2_3)_(Fer4_17);(Sdh_cyt)	1	5	24	8	60	19	1445	100	92	62
(Peptidase_C65);(ubiquitin)	1	10	11	10	11	10	1039	100	91	100
(PRELI);(UPF0203)	1	7	8	7	8	31	1324	100	75	100
(Hormone_recep);(SRC-1)	1	14	23	67	461	7	667	100	96	21
(Ras);(Rho_GDI)	1	6	6	7	7	53	1456	100	100	86
(PKI);(Pkinase)	1	19	195	20	267	10	885	91	84	95
(PKI);(Pkinase)	2	12	128	20	267	0	371	0	1	60
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_( RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_R pb2_45)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	11	13	11	13	84	8022	100	62	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5);(zf-dskA_traR)	1	14	14	14	14	21	1680	100	14	100
(RVT_1)_(RVT_thumb)_(RVT_connect);(RVT_1)_(RVT_thumb)_(RVT_c onnect)_(RNase_H)	1	35	279	38	359	11	2645	100	96	92
(RnaseA);(V-set)	1	8	12	8	12	89	581	100	75	100
(Sec1);(Vps16_C)	1	5	5	5	5	28	2079	100	80	100
(Sec1);(Syntaxin)_(SNARE)	1	5	7	5	7	5	2175	100	100	100
(SipA_VBS);(Vinculin)	1	6	6	6	6	10	1157	100	100	100
(Stap_Strp_toxin)_(Stap_Strp_tox_C);(V-set)	1	5	9	5	9	43	626	100	44	100
(T6SS_VipA);(VipB)_(VipB_2)	1	8	8	8	8	15	2803	100	50	100
(T6SS_VipA);(VipB)_(VipB_2)	2	5	5	8	8	26	718	100	60	62
(CHCH);(NADHdh_A3)	1	49	49	53	53	39	1098	100	14	92
(CHCH);(Ndufs5)	1	46	46	53	53	57	535	100	15	87
(Cytochrom_C1);(UCR_TM)_(Rieske)	1	29	59	33	71	0	793	100	75	88
(Cytochrome_B)_(Cytochrom_B_C);(UCR_TM)_(Rieske)	1	29	62	33	71	49	519	100	74	88
(Cytochrome_B)_(Cytochrom_B_C);(UCR_TM)_(Rieske)	2	25	50	33	71	49	832	86	70	76
(UCR_TM)_(Rieske);(UCR_UQCRX_QCR9)	1	32	63	33	71	31	632	100	70	97
(UCR_TM)_(Rieske);(UcrQ)	1	29	62	33	71	4	577	100	74	88
(G-alpha);(V-set)	1	72	72	72	96	1	835	100	1	100
(G-alpha);(ZapB)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	28	28	28	28	24	1345	100	7	100
(DNA_RNApol_7kD);(RNA_pol_A_bac)	1	112	234	112	250	0	582	100	59	100
(RNA_pol_A_bac);(RNA_pol_L_2)	1	111	235	112	250	4	2036	100	66	99
(ubiquitin);(zf-C3HC4_3)	1	8	8	8	9	26	385	100	50	100
(ubiquitin);(zf-RanBP)	1	5	8	5	8	34	376	88	38	100
(RNA_pol_A_bac);(RNA_pol_N)	1	112	234	112	250	20	1112	100	71	100
(MRP-S23);(Ribosomal_S2)	1	29	29	29	29	75	1793	100	7	100
(MRP-S26);(Ribosomal_S15)	1	29	29	32	32	71	486	100	7	91
(MRP-S26);(Ribosomal_S16)	1	30	30	33	33	4	777	100	7	91
(MRP-S26);(Ribosomal_S6)	1	29	29	32	32	75	904	100	7	91
(MRP-S28);(MRP-S33)	1	28	28	35	35	83	657	100	7	80
(MRP-S28);(MRP-S33)	2	7	7	35	35	30	740	86	0	20
(MRP-S28);(Ribosomal_S10)	1	28	28	35	35	13	2093	100	7	80
(MRP-S28);(Ribosomal_S10)	2	7	7	35	35	30	2303	86	0	20
(Ribosomal_L11_N)_(Ribosomal_L11);(Ribosomal_L37)	1	17	17	22	22	23	1504	100	12	77
(Ribosomal_S21);(Ribosomal_S6)	1	26	26	32	32	19	222	100	8	81
(AA_permease_2);(SLC3A2_N)_(Alpha-amylase)_(DUF3459)	1	9	9	13	13	50	1379	100	0	69
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Prot_ATP_ID_OB) _(AAA)_(AAA_lid_3)	1	29	29	29	29	38	2645	100	24	100
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome_A_N) _(Proteasome)	1	21	21	23	23	36	370	100	19	91
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome_A_N) _(Proteasome)	2	15	15	23	23	22	394	100	27	65
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome_A_N) _(Proteasome)	3	12	12	23	23	30	373	100	8	52
(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome_A_N)_(Proteas ome)	1	48	48	52	52	26	395	100	29	92
(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome_A_N)_(Proteas ome)	2	48	48	52	52	31	392	100	27	92
(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome_A_N)_(Proteas ome)	3	43	43	52	52	60	483	100	30	83
(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(Proteasome_A_N)_(Proteas ome)	4	15	15	52	52	31	299	100	33	29
(ORC2);(ORC3_N)_(ORC3_ins)_(ORC_WH_C)	1	12	12	19	19	11	2579	100	17	63
(LRR_9);(LSM)	1	16	16	18	18	4	386	100	12	89
(Ribosomal_S11);(Ribosomal_S28e)	1	95	95	111	111	4	288	99	6	86
(Mpp10);(Ribosomal_S4)_(S4)	1	16	16	16	16	43	988	100	0	100
(HlyD_D23);(OEP)_(OEP)	1	8	8	9	9	7	527	100	75	89
(HlyD_D23);(OEP)_(OEP)	2	8	8	9	9	7	223	100	75	89
(HlyD_D23);(OEP)_(OEP)	3	8	8	9	9	19	287	100	75	89
(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C);(OSCP)	1	73	73	131	131	13	749	100	51	56
(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C);(OSCP)	2	71	71	131	131	13	1199	100	63	54
(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C);(OSCP)	3	66	66	131	131	12	599	100	9	50
(Ribosomal_L28);(Ribosomal_L9_N)	1	19	19	28	28	6	351	95	11	68
(ANAPC2);(Apc1_N)_(APC1_C)	1	11	11	11	11	79	2378	100	36	100
(CSN8_PSD8_EIF3K);(JAB)_(MitMem_reg)	1	33	33	57	58	31	316	100	27	58
(CSN8_PSD8_EIF3K);(JAB)_(MitMem_reg)	3	12	12	57	58	31	287	100	0	21
(CSN8_PSD8_EIF3K);(JAB)_(MitMem_reg)	4	11	11	57	58	31	286	100	36	19
(DSS1_SEM1);(PCI)_(Rpn3_C)	1	24	24	41	41	34	965	100	0	59
(DSS1_SEM1);(PCI)_(Rpn3_C)	2	16	16	41	41	31	808	100	31	39
(DSS1_SEM1);(RPN7)_(PCI)	1	32	32	57	57	0	952	100	3	56
(DSS1_SEM1);(RPN7)_(PCI)	2	25	25	57	57	37	851	100	56	44
(JAB)_(MitMem_reg);(PCI)_(Rpn3_C)	1	39	39	52	52	31	789	100	18	75
(JAB)_(MitMem_reg);(PCI)_(Rpn3_C)	2	8	8	52	52	32	1325	100	100	15
(JAB)_(MitMem_reg);(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3)	1	19	19	35	35	66	329	100	16	54
(JAB)_(MitMem_reg);(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3)	2	15	15	35	35	66	567	100	40	43
(JAB)_(MitMem_reg);(RPN6_N)_(PCI)_(RPN6_C_helix)	1	27	27	58	58	43	590	100	37	47
(JAB)_(MitMem_reg);(RPN6_N)_(PCI)_(RPN6_C_helix)	2	23	23	58	58	43	510	100	26	40
(JAB)_(MitMem_reg);(RPN6_N)_(PCI)_(RPN6_C_helix)	3	22	22	58	58	43	507	100	0	38
(JAB)_(MitMem_reg);(RPN6_N)_(PCI)_(RPN6_C_helix)	4	20	20	58	58	43	485	100	0	34
(JAB)_(MitMem_reg);(RPN6_N)_(PCI)_(RPN6_C_helix)	5	14	14	58	58	43	557	100	57	24
(JAB)_(MitMem_reg);(RPN6_N)_(PCI)_(RPN6_C_helix)	6	9	9	58	58	43	493	100	56	16
(JAB)_(MitMem_reg);(RPN7)_(PCI)	1	48	49	62	63	4	426	100	18	77
(JAB)_(MitMem_reg);(RPN7)_(PCI)	2	14	14	62	63	37	404	100	57	23
(PCI)_(Rpn3_C);(RPN7)_(PCI)	1	51	51	51	51	27	1261	100	29	100
(APG6_N)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3);(PCI)_(Rpn3_C)	1	9	9	20	20	32	511	100	44	45
(PCI)_(Rpn9_C);(VWA_2)	1	13	13	25	25	31	662	100	23	52
(Proteasome_A_N)_(Proteasome);(RPN6_N)_(PCI)_(RPN6_C_helix)	1	19	19	38	38	43	711	100	26	50
(Proteasome_A_N)_(Proteasome);(RPN6_N)_(PCI)_(RPN6_C_helix)	2	10	10	38	38	43	523	100	30	26
(PCI)_(Rpn3_C);(ZapB)_(Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3)	1	17	17	22	22	31	628	100	35	77
(ATP-synt_A);(Mt_ATP-synt_B)	1	32	32	39	39	6	713	100	19	82
(ATP-synt_A);(Mt_ATP-synt_D)	1	22	22	32	32	85	360	100	27	69
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(ATP-synt_ab_N )_(ATP-synt_ab_Xtn)_(ATP-synt_ab)	1	27	35	27	36	13	2224	97	46	100
(ATP-synt_ab_N)_(ATP-synt_ab)_(T3SS_ATPase_C);(ATP-synt_ab_N )_(ATP-synt_ab_Xtn)_(ATP-synt_ab)	2	27	35	27	36	13	1404	94	43	100
(ATP-synt);(IATP)	1	15	15	24	27	30	386	100	27	62
(ATP-synt_8);(Mt_ATP-synt_D)	1	11	11	23	23	4	456	100	45	48
(ATP-synt_B);(OSCP)	2	12	12	27	27	27	686	100	0	44
(Ribosomal_L14e);(Ribosomal_L18A)	1	25	25	27	27	14	1066	100	8	93
(Ribosomal_L18);(Ribosomal_L28e)	1	93	93	98	98	5	228	99	3	95
(Ribosomal_L24e);(Ribosomal_S6e)	1	82	95	93	106	1	801	76	2	88
(Ribosomal_L28e);(Ribosomal_L32e)	1	96	96	102	102	0	762	99	3	94
(Ribosomal_L28e);(Ribosomal_L32e)	2	6	6	102	102	22	820	100	17	6
(Ribosomal_L28e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	102	102	102	102	13	943	99	4	100
(eIF-1a);(Ribosomal_S30)	1	7	7	10	10	46	445	86	14	70
(eIF-5_eIF-2B);(GTP_EFTU)_(GTP_EFTU_D2)_(eIF2_C)	1	22	23	23	24	8	835	100	43	96
(Skp1_POZ);(VHL)_(VHL_C)	1	16	54	16	56	4	1019	100	87	100
(BMC);(BMC)_(BMC)	1	6	6	7	7	16	306	100	0	86
(BMC);(BMC)_(BMC)	2	6	6	7	7	18	268	100	0	86
(GP120);(V-set)	4	5	5	21	22	43	1048	100	40	24
(Calici_coat);(Rhv)	1	27	28	28	29	9	1145	100	29	96
(CRPV_capsid);(Rhv)	1	26	26	27	27	5	1296	100	35	96
(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_ Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7); (Sigma70_r1_2)_(Sigma70_r2)_(Sigma70_r3)_(Sigma70_r4)	1	14	43	14	48	33	1931	100	95	100
(Cohesin);(Dockerin_1)	1	8	8	17	19	8	912	100	100	47
(Cohesin);(Dockerin_1)	2	5	6	17	19	15	743	100	100	29
(CP12);(Gp_dh_N)_(Gp_dh_C)	1	9	12	9	12	32	732	100	100	100
(CP12);(Gp_dh_N)_(Gp_dh_C)	2	9	12	9	12	32	288	92	100	100
(Med17);(Med6)	1	11	11	13	13	4	707	100	18	85
(Med6);(Med8)	1	10	10	10	10	4	883	100	20	100
(FancD2);(FANCI_S1-cap)_(FANCI_S1)_(FANCI_HD1)_(FANCI_S2)_(F ANCI_HD2)_(FANCI_S3)_(FANCI_S4)	1	7	7	13	13	76	2238	100	14	54
(FancD2);(FANCI_S1-cap)_(FANCI_S1)_(FANCI_HD1)_(FANCI_S2)_(F ANCI_HD2)_(FANCI_S3)_(FANCI_S4)	2	5	5	13	13	57	2903	100	0	38
(FAM181);(YBD)	1	5	15	10	20	60	1197	100	40	50
(LAMTOR5);(Robl_LC7)	1	16	16	16	16	14	938	100	62	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_ Rpb1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_5);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_R pb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_( RNA_pol_Rpb2_7)	1	7	36	7	36	77	9452	100	100	100
(HCV_NS1);(V-set_2)_(C1-set)	1	6	6	11	11	77	481	0	0	55
(HCV_NS1);(V-set_2)_(C1-set)	2	5	5	11	11	79	646	100	100	45
(HCV_NS1);(V-set_2)_(C1-set)	3	5	5	11	11	21	1023	100	100	45
(Histone)_(Histone_H2A_C);(Mab-21)	1	10	10	11	11	69	534	100	0	91
(MazE_antitoxin);(PIN)	1	6	6	9	9	24	1290	100	100	67
(Neur_chan_LBD);(Neur_chan_LBD)_(Neur_chan_memb)	1	11	11	13	13	14	2482	100	9	85
(OTU);(ubiquitin)	1	11	11	16	16	4	1004	100	91	69
(Ricin_B_lectin)_(Ricin_B_lectin);(RIP)	1	9	26	12	39	33	1538	100	92	75
(TNF);(TNFR_c6)_(TNFR_c6)_(TNFR_c6)	1	6	6	8	8	21	688	100	67	75
(TNF);(TNFR_c6)_(TNFR_c6)_(TNFR_c6)	2	6	6	8	8	21	469	83	67	75
(2Fe-2S_thioredx);(Complex1_51K)_(SLBB)_(NADH_4Fe-4S)	1	73	86	73	92	4	2611	100	38	100
(2Fe-2S_thioredx);(ETC_C1_NDUFA4)	1	8	8	36	36	31	271	100	12	22
(CI-B14_5a);(Complex1_30kDa)	1	46	46	46	46	84	1282	100	11	100
(CI-B14_5a);(Complex1_49kDa)	1	46	46	46	46	84	1485	100	11	100
(CI-B14_5a);(Complex1_51K)_(SLBB)_(NADH_4Fe-4S)	1	40	40	45	45	84	224	100	10	89
(CI-B14_5a);(ETC_C1_NDUFA5)	1	43	43	45	45	83	380	100	9	96
(CI-B14_5a);(Fer4_7)	1	46	46	46	46	84	999	100	11	100
(CI-B14_5a);(GRIM-19)	1	42	42	45	45	9	478	100	10	93
(CI-B14_5a);(NDUFA12)	1	43	43	45	45	84	498	100	12	96
(Complex1_30kDa);(Complex1_49kDa)	1	84	92	84	92	3	2424	100	29	100
(Complex1_30kDa);(Complex1_LYR)	1	61	61	61	61	17	1039	100	20	100
(Complex1_30kDa);(ETC_C1_NDUFA4)	1	58	58	58	58	29	1332	100	14	100
(Complex1_30kDa);(ETC_C1_NDUFA5)	1	62	62	62	62	2	1424	100	19	100
(Complex1_30kDa);(Fer4_7)	1	59	59	71	79	19	269	100	20	83
(Complex1_30kDa);(Oxidored_q6)	1	79	87	81	89	18	677	100	31	98
(Complex1_49kDa);(dNK)	1	42	42	45	45	78	460	100	7	93
(Complex1_49kDa);(ESSS)	1	26	26	37	37	79	227	100	12	70
(Complex1_49kDa);(ETC_C1_NDUFA5)	1	58	58	61	61	31	428	100	21	95
(Complex1_49kDa);(Fer4_7)	1	83	91	83	91	4	1745	100	30	100
(Complex1_49kDa);(GRIM-19)	1	61	61	61	61	22	931	100	20	100
(Complex1_49kDa);(NADHdh)	1	75	80	78	83	3	1098	100	24	96
(Complex1_49kDa);(Oxidored_q2)	1	27	27	44	44	66	256	100	7	61
(Complex1_49kDa);(Oxidored_q4)	1	56	61	68	73	10	464	100	30	82
(Complex1_49kDa);(Oxidored_q5_N)_(Proton_antipo_M)	1	42	42	46	46	67	311	100	10	91
(Complex1_49kDa);(Oxidored_q6)	1	84	92	84	92	1	1460	100	29	100
(Complex1_49kDa);(Proton_antipo_M)_(NADH_dehy_S2_C)	1	48	48	49	49	54	848	100	15	98
(Complex1_49kDa);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_ C)	1	30	30	50	50	64	387	100	13	60
(Complex1_49kDa);(zf-CHCC)	1	40	40	46	46	25	221	100	12	87
(Complex1_51K)_(SLBB)_(NADH_4Fe-4S);(ETC_C1_NDUFA4)	1	54	54	57	57	29	506	100	15	95
(Complex1_LYR);(ETC_C1_NDUFA4)	1	56	56	56	56	17	659	100	14	100
(Complex1_LYR);(NDUF_B12)	1	51	51	55	55	22	458	100	14	93
(Complex1_LYR);(NDUF_B4)	1	52	52	56	56	61	1308	100	17	93
(Complex1_LYR);(NDUF_B5)	1	47	47	50	50	24	534	100	15	94
(Complex1_LYR);(NDUF_B6)	1	50	50	50	50	25	1015	100	14	100
(Complex1_LYR);(NDUF_B8)	1	48	48	51	51	21	405	100	10	94
(Complex1_LYR);(Oxidored_q4)	1	10	10	35	35	64	220	100	10	29
(Complex1_LYR);(Oxidored_q5_N)_(Proton_antipo_M)	1	56	56	60	60	22	412	100	18	93
(Complex1_LYR);(PP-binding)	1	74	82	77	85	3	743	100	26	96
(Complex1_LYR);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	60	60	60	60	22	1381	100	18	100
(COX1);(COX2_TM)_(COX2)	1	29	90	29	93	15	3551	100	74	100
(COX1);(COX3)	1	30	83	30	85	7	2448	100	72	100
(COX1);(COX4)	1	16	69	20	74	16	1335	100	75	80
(COX1);(COX5B)	1	18	70	21	75	0	1235	100	70	86
(COX1);(COX6A)	1	15	67	20	74	21	360	100	69	75
(COX1);(COX7a)	1	15	67	17	71	3	264	100	73	88
(COX1);(COX7B)	1	11	58	13	67	80	338	100	74	85
(COX1);(COX7C)	1	22	74	22	76	22	1695	100	68	100
(COX1);(COX8)	1	14	66	14	68	37	1044	100	73	100
(COX2_TM)_(COX2);(COX4)	1	14	62	19	73	16	860	100	76	74
(COX2_TM)_(COX2);(COX5A)	1	11	58	19	73	71	279	100	71	58
(COX2_TM)_(COX2);(COX6B)	1	22	70	22	76	41	966	100	63	100
(COX2_TM)_(COX2);(COX6C)	1	20	73	20	74	11	1441	100	71	100
(COX3);(COX5B)	1	22	74	22	76	14	895	100	69	100
(COX3);(COX6A)	1	19	71	22	76	6	1605	100	66	86
(COX3);(COX6B)	1	19	67	21	75	41	251	100	67	90
(COX3);(COX7a)	1	22	69	22	76	0	1311	100	70	100
(COX4);(COX5A)	1	16	63	20	74	6	1248	100	70	80
(COX4);(COX6C)	1	11	59	13	67	74	402	100	73	85
(COX4);(COX7B)	1	14	61	14	68	78	1436	100	70	100
(COX4);(COX8)	1	10	58	13	67	37	329	100	78	77
(COX5A);(COX5B)	1	8	8	15	15	35	256	100	38	53
(COX5A);(COX6C)	1	13	60	18	72	17	613	100	67	72
(COX6A);(COX6B)	1	10	57	17	71	28	209	100	65	59
(COX7C);(COX8)	1	12	64	14	68	37	717	100	73	86
(Cytochrome_B)_(Cytochrom_B_C);(Peptidase_M16)_(Peptidase_M1 6_C)	1	39	73	43	81	5	423	100	77	91
(dNK);(ESSS)	1	43	43	47	47	58	412	100	14	91
(dNK);(ETC_C1_NDUFA5)	1	10	10	37	37	78	322	100	0	27
(dNK);(NDUF_C2)	1	50	50	50	50	42	382	100	14	100
(dNK);(Proton_antipo_M)_(NADH_dehy_S2_C)	1	51	51	51	51	54	1584	100	14	100
(ESSS);(NDUF_B5)	1	49	49	50	50	24	891	100	14	98
(ESSS);(NDUFB10)	1	50	50	50	50	31	1518	100	14	100
(ESSS);(Oxidored_q5_N)_(Proton_antipo_M)	1	50	50	50	50	5	1589	100	14	100
(ETC_C1_NDUFA4);(Fer4_7)	1	53	53	56	56	30	248	100	13	95
(ETC_C1_NDUFA4);(NDUFA12)	1	6	6	7	7	26	243	100	17	86
(Fer4_7);(GRIM-19)	1	56	56	60	60	22	358	100	20	93
(Fer4_7);(NADHdh)	1	75	80	76	81	16	714	100	24	99
(Fer4_7);(NADHdh_A3)	1	54	54	58	58	7	329	100	19	93
(Fer4_7);(NDUFA12)	1	60	60	60	60	26	1929	100	20	100
(Fer4_7);(Oxidored_q6)	1	83	91	83	91	1	1280	100	30	100
(Fer4_7);(zf-CHCC)	1	61	61	61	61	25	945	100	18	100
(GRIM-19);(MWFE)	1	59	59	62	62	21	569	100	19	95
(GRIM-19);(NADHdh)	1	63	63	63	63	22	916	100	17	100
(GRIM-19);(NADHdh_A3)	1	54	54	57	57	21	575	100	20	95
(GRIM-19);(Ndufs5)	1	57	57	61	61	22	1251	100	19	93
(GRIM-19);(Oxidored_q3)	1	51	51	62	62	0	725	100	18	82
(GRIM-19);(Oxidored_q3)	2	10	10	62	62	31	833	100	20	16
(MWFE);(NADHdh)	1	63	63	63	63	2	1530	100	17	100
(MWFE);(Oxidored_q3)	1	55	55	58	58	1	296	100	13	95
(NADH_B2);(NDUF_B12)	1	54	54	54	54	21	842	100	11	100
(NADH_B2);(NDUF_B7)	1	52	52	54	54	22	699	100	12	96
(NADH_B2);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	55	55	55	55	21	1444	100	11	100
(NADH_oxidored);(NDUF_B5)	1	48	48	50	50	24	634	100	15	96
(NADH_oxidored);(NDUFB10)	1	43	43	46	46	9	318	100	7	93
(NADH_oxidored);(Oxidored_q5_N)_(Proton_antipo_M)	1	49	49	50	50	67	732	100	14	98
(NADHdh);(NADHdh_A3)	1	63	63	63	63	11	658	100	17	100
(NADHdh);(NDUFA12)	1	30	30	41	41	26	227	100	10	73
(NADHdh);(Oxidored_q3)	1	78	83	81	86	0	1030	100	25	96
(NADHdh);(Oxidored_q4)	1	81	86	81	86	3	2699	100	24	100
(NADHdh);(Oxidored_q6)	1	78	83	78	83	0	1172	100	23	100
(NADHdh_A3);(Oxidored_q4)	1	54	54	62	62	22	342	100	17	87
(NDUF_B12);(PP-binding)	1	52	52	55	55	0	623	100	13	95
(NDUF_B12);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	52	52	55	55	31	805	100	13	95
(NDUF_B4);(NDUF_B8)	1	47	47	52	52	75	1794	100	9	90
(NDUF_B4);(NDUFB10)	1	49	49	52	52	9	380	100	18	94
(NDUF_B4);(Oxidored_q5_N)_(Proton_antipo_M)	1	52	52	60	60	61	1301	100	17	87
(NDUF_B4);(Peptidase_M16)_(Peptidase_M16_C)	1	7	7	7	7	75	305	100	0	100
(NDUF_B4);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	52	52	59	59	61	868	100	17	88
(NDUF_B5);(NDUF_B6)	1	43	43	46	46	73	254	100	7	93
(NDUF_B5);(NDUF_C2)	1	47	47	50	50	24	681	100	15	94
(NDUF_B5);(NDUFB10)	1	50	50	50	50	9	1075	100	14	100
(NDUF_B5);(Ndufs5)	1	47	47	50	50	70	968	100	9	94
(NDUF_B5);(Oxidored_q5_N)_(Proton_antipo_M)	1	51	51	51	51	24	1171	100	14	100
(NDUF_B5);(Proton_antipo_M)_(NADH_dehy_S2_C)	1	44	44	50	50	54	295	100	9	88
(NDUF_B5);(Tim17)	1	10	10	34	34	67	201	100	0	29
(NDUF_B6);(NDUF_B7)	1	45	45	46	46	69	774	100	7	98
(NDUF_B6);(NDUFB10)	1	46	46	50	50	9	1176	100	7	92
(NDUF_B6);(PP-binding)	1	47	47	50	50	5	524	100	15	94
(NDUF_B6);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	46	46	50	50	64	899	100	7	92
(NDUF_B7);(NDUF_B8)	1	50	50	50	50	21	1319	100	10	100
(NDUF_B7);(NDUFB10)	1	49	49	54	54	9	527	100	12	91
(NDUF_B7);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	55	55	59	59	23	867	100	18	93
(NDUF_B8);(Oxidored_q5_N)_(Proton_antipo_M)	1	48	48	51	51	21	493	100	10	94
(NDUF_B8);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	51	51	51	51	21	1640	100	10	100
(NDUF_C2);(NDUFB10)	1	51	51	51	51	9	704	100	16	100
(NDUF_C2);(Ndufs5)	1	29	29	40	40	70	226	100	7	72
(NDUF_C2);(Oxidored_q5_N)_(Proton_antipo_M)	1	41	41	55	55	67	243	100	10	75
(NDUF_C2);(Proton_antipo_M)_(NADH_dehy_S2_C)	1	51	51	51	51	42	999	100	14	100
(NDUFA12);(Oxidored_q6)	1	57	57	60	60	26	304	100	21	95
(NDUFA12);(zf-CHCC)	1	51	51	54	54	26	629	100	16	94
(NDUFB10);(Oxidored_q5_N)_(Proton_antipo_M)	1	50	50	59	59	9	744	100	18	85
(NDUFB10);(Oxidored_q5_N)_(Proton_antipo_M)	2	6	6	59	59	27	992	100	33	10
(NDUFB10);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	50	50	59	59	9	1068	100	18	85
(NDUFB10);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	2	6	6	59	59	27	903	100	33	10
(Ndufs5);(Oxidored_q2)	1	62	62	62	62	22	494	100	18	100
(Ndufs5);(Oxidored_q3)	1	49	49	61	61	51	785	100	18	80
(Ndufs5);(Oxidored_q3)	2	9	9	61	61	28	490	100	22	15
(Ndufs5);(Proton_antipo_M)_(NADH_dehy_S2_C)	1	50	50	50	50	54	872	100	14	100
(Oxidored_q2);(Oxidored_q3)	1	82	87	82	87	0	2815	100	25	100
(Oxidored_q2);(Oxidored_q4)	1	77	82	82	87	1	410	100	27	94
(Oxidored_q2);(Proton_antipo_M)_(NADH_dehy_S2_C)	1	51	51	51	51	6	1620	100	14	100
(Oxidored_q2);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	55	55	59	59	6	489	100	22	93
(Oxidored_q3);(Oxidored_q4)	1	80	85	82	87	0	1804	100	26	98
(Oxidored_q3);(Proton_antipo_M)_(NADH_dehy_S2_C)	1	48	48	51	51	0	752	100	15	94
(Oxidored_q3);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	5	5	6	6	19	373	100	60	83
(Oxidored_q4);(Oxidored_q6)	1	42	47	64	69	24	510	100	28	66
(Oxidored_q5_N)_(Proton_antipo_M);(Proton_antipo_M)_(NADH_de hy_S2_C)	1	51	51	51	51	54	1169	100	14	100
(Oxidored_q5_N)_(Proton_antipo_M);(Proton_antipo_N)_(Proton_ antipo_M)_(NADH5_C)	1	62	62	62	62	28	2216	100	19	100
(Oxidored_q5_N)_(Proton_antipo_M);(Tim17)	1	43	43	55	55	64	219	100	16	78
(Peptidase_M16)_(Peptidase_M16_C);(Ubiq-Cytc-red_N)	1	23	45	23	55	6	1632	100	73	100
(Peptidase_M16)_(Peptidase_M16_C);(Ubiq-Cytc-red_N)	2	23	43	23	55	6	929	100	72	100
(Peptidase_M16)_(Peptidase_M16_C);(UCR_14kD)	1	34	56	43	81	21	399	88	70	79
(Peptidase_M16)_(Peptidase_M16_C);(UCR_6-4kD)	1	13	25	16	29	77	334	100	68	81
(PP-binding);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C)	1	44	44	50	50	0	292	100	16	88
(Proton_antipo_M)_(NADH_dehy_S2_C);(Proton_antipo_N)_(Proton _antipo_M)_(NADH5_C)	1	47	47	51	51	41	966	100	15	92
(Proton_antipo_M)_(NADH_dehy_S2_C);(Tim17)	1	48	48	50	50	54	512	100	15	96
(Proton_antipo_N)_(Proton_antipo_M)_(NADH5_C);(Tim17)	1	46	46	55	55	20	598	100	20	84
(Tim17);(UcrQ)	1	7	7	7	7	69	355	100	0	100
(UCR_14kD);(UCR_6-4kD)	1	7	7	15	28	84	215	100	0	47
(UCR_6-4kD);(UCR_UQCRX_QCR9)	1	14	27	17	30	77	572	100	67	82
(2Fe-2S_thioredx);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Moly bdop_Fe4S4)_(Molybdopterin)_(NADH_dhqG_C)	1	12	12	12	12	52	830	100	33	100
(2Fe-2S_thioredx);(NDUFV3)	1	45	45	45	45	70	994	100	11	100
(CHCH);(NDUF_B5)	1	45	45	49	49	24	617	100	13	92
(CHCH);(NDUF_C2)	1	48	48	49	49	42	641	100	15	98
(CHCH);(Oxidored_q5_N)_(Proton_antipo_M)	1	42	42	45	45	67	257	100	7	93
(CHCH);(Proton_antipo_M)_(NADH_dehy_S2_C)	1	42	42	45	45	57	257	100	7	93
(Complex1_30kDa);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molyb dop_Fe4S4)_(Molybdopterin)_(NADH_dhqG_C)	1	12	12	12	12	47	553	100	33	100
(Complex1_30kDa);(NmrA)	1	35	35	38	38	82	545	100	6	92
(Complex1_49kDa);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molyb dop_Fe4S4)_(Molybdopterin)_(NADH_dhqG_C)	1	12	12	12	12	52	911	100	33	100
(Complex1_51K)_(SLBB)_(NADH_4Fe-4S);(Fer2_4)_(NADH-G_4Fe-4S_ 3)_(Fer4_10)_(Molybdop_Fe4S4)_(Molybdopterin)_(NADH_dhqG_C)	1	12	12	12	12	52	1468	100	33	100
(Complex1_51K)_(SLBB)_(NADH_4Fe-4S);(NDUFV3)	1	45	45	45	45	70	1129	100	11	100
(Complex1_LYR);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molybdo p_Fe4S4)_(Molybdopterin)_(NADH_dhqG_C)	1	12	12	12	12	27	480	100	33	100
(Complex1_LYR);(NmrA)	1	35	35	38	38	82	378	100	6	92
(dNK);(NADH_dh_m_C1)	1	46	46	49	49	58	580	100	15	94
(ETC_C1_NDUFA4);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molybd op_Fe4S4)_(Molybdopterin)_(NADH_dhqG_C)	1	11	11	11	11	29	1952	100	27	100
(ETC_C1_NDUFA4);(NDUFV3)	1	37	37	40	40	70	261	100	11	92
(ETC_C1_NDUFA4);(NmrA)	1	35	35	38	38	82	348	100	6	92
(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molybdop_Fe4S4)_(Molyb dopterin)_(NADH_dhqG_C);(Fer4_7)	1	12	12	12	12	52	525	100	33	100
(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molybdop_Fe4S4)_(Molyb dopterin)_(NADH_dhqG_C);(L51_S25_CI-B8)	1	12	12	12	12	33	1174	100	33	100
(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molybdop_Fe4S4)_(Molyb dopterin)_(NADH_dhqG_C);(NDUFA12)	1	12	12	12	12	33	695	100	33	100
(Fer2_4)_(NADH-G_4Fe-4S_3)_(Fer4_10)_(Molybdop_Fe4S4)_(Molyb dopterin)_(NADH_dhqG_C);(zf-CHCC)	1	12	12	12	12	31	461	100	33	100
(NADH_dh_m_C1);(NDUF_C2)	1	49	49	49	49	42	850	100	14	100
(NmrA);(Oxidored_q6)	1	35	35	38	38	82	679	100	6	92
(NmrA);(zf-CHCC)	1	35	35	38	38	82	514	100	6	92
(Peptidase_M16)_(Peptidase_M16_C);(UCR_TM)_(Rieske)	1	32	62	33	71	28	876	100	71	97
(2Fe-2S_thioredx);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4 )_(Molybdopterin)_(NADH_dhqG_C)	1	38	38	38	38	46	722	100	8	100
(CI-B14_5a);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4)_(Mol ybdopterin)_(NADH_dhqG_C)	1	32	32	35	35	84	493	100	9	91
(Complex1_30kDa);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4) _(Molybdopterin)_(NADH_dhqG_C)	1	37	37	38	38	50	680	100	8	97
(Complex1_49kDa);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4) _(Molybdopterin)_(NADH_dhqG_C)	1	38	38	38	38	54	864	100	8	100
(Complex1_51K)_(SLBB)_(NADH_4Fe-4S);(Fer2_4)_(NADH-G_4Fe-4S_ 3)_(Molybdop_Fe4S4)_(Molybdopterin)_(NADH_dhqG_C)	1	38	38	38	38	54	1306	100	8	100
(Complex1_LYR);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4)_( Molybdopterin)_(NADH_dhqG_C)	1	35	35	38	38	32	569	100	9	92
(ETC_C1_NDUFA4);(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4)_ (Molybdopterin)_(NADH_dhqG_C)	1	38	38	38	38	38	1952	100	8	100
(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4)_(Molybdopterin)_ (NADH_dhqG_C);(Fer4_7)	1	36	36	38	38	54	523	100	8	95
(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4)_(Molybdopterin)_ (NADH_dhqG_C);(L51_S25_CI-B8)	1	38	38	38	38	39	1197	100	8	100
(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4)_(Molybdopterin)_ (NADH_dhqG_C);(NDUFA12)	1	38	38	38	38	34	662	100	8	100
(Fer2_4)_(NADH-G_4Fe-4S_3)_(Molybdop_Fe4S4)_(Molybdopterin)_ (NADH_dhqG_C);(zf-CHCC)	1	37	37	38	38	31	470	100	8	97
(Complex1_30kDa);(NAD_binding_10)	1	14	14	16	16	33	592	100	36	88
(Complex1_LYR);(NAD_binding_10)	1	12	12	12	12	29	570	100	42	100
(ETC_C1_NDUFA4);(NAD_binding_10)	1	15	15	15	15	30	374	100	27	100
(NAD_binding_10);(Oxidored_q4)	1	8	8	9	9	32	335	100	38	89
(NAD_binding_10);(Oxidored_q6)	1	16	16	16	16	33	958	100	31	100
(NAD_binding_10);(zf-CHCC)	1	12	12	12	12	31	575	100	42	100
(NDUF_C2);(Proton_antipo_M)	1	10	10	10	10	22	1193	100	20	100
(Ndufs5);(Proton_antipo_M)	1	9	9	9	9	23	500	100	22	100
(Oxidored_q2);(Proton_antipo_M)	1	22	27	22	27	5	1531	100	44	100
(Oxidored_q3);(Proton_antipo_M)	1	20	25	20	25	0	1098	100	48	100
(Oxidored_q4);(Proton_antipo_M)	1	18	23	20	25	21	334	100	52	90
(Oxidored_q5_N)_(Proton_antipo_M);(Proton_antipo_M)	1	9	9	9	9	23	1553	100	33	100
(Proton_antipo_M);(Proton_antipo_N)_(Proton_antipo_M)_(NADH5 _C)	1	10	10	12	12	21	1028	100	50	83
(Oxidored_q2);(Proton_antipo_N)_(Proton_antipo_M)	1	11	11	16	21	17	1622	100	9	69
(Oxidored_q2);(Proton_antipo_N)_(Proton_antipo_M)	2	5	10	16	21	27	466	100	70	31
(CR6_interact);(Img2)	1	5	5	10	16	76	209	100	20	50
(CR6_interact);(MRP-L51)	1	30	33	30	39	76	423	100	12	100
(CR6_interact);(Ribosomal_L27A)	1	29	32	29	38	76	1065	100	12	100
(CR6_interact);(Ribosomal_L28)	1	29	32	29	38	76	384	100	12	100
(CR6_interact);(Ribosomal_L33)	1	29	32	29	38	76	481	100	12	100
(CR6_interact);(Ribosomal_L4)	1	29	32	29	38	76	459	100	12	100
(Img2);(MRP-63)	1	30	33	30	39	72	594	100	12	100
(Img2);(Ribosomal_L27A)	1	29	32	34	43	87	1377	100	12	85
(Img2);(Ribosomal_L4)	1	39	42	44	53	4	824	98	12	89
(KOW)_(ribosomal_L24);(MRP-L27)	1	30	33	30	39	22	1353	100	12	100
(KOW)_(ribosomal_L24);(MRP-L47)	1	36	39	36	45	7	1700	100	13	100
(KOW)_(ribosomal_L24);(Ribosomal_L23)	1	31	34	36	45	81	786	100	15	86
(L51_S25_CI-B8);(MRP-63)	1	30	33	30	39	72	370	100	12	100
(L51_S25_CI-B8);(MRP-S32)	1	30	33	30	39	8	669	100	15	100
(L51_S25_CI-B8);(Ribonucleas_3_3)_(dsrm)	1	30	33	34	43	88	1492	100	15	88
(L51_S25_CI-B8);(Ribosomal_L13)	1	39	42	43	52	18	783	98	12	91
(L51_S25_CI-B8);(Ribosomal_L20)	1	31	34	31	40	22	595	100	12	100
(L51_S25_CI-B8);(Ribosomal_L21p)	1	41	44	45	54	0	1286	98	11	91
(L51_S25_CI-B8);(Ribosomal_L22)	1	9	9	13	13	25	365	89	11	69
(L51_S25_CI-B8);(Ribosomal_L50)	1	30	33	39	48	80	687	100	15	77
(L51_S25_CI-B8);(Ribosomal_L50)	2	9	9	39	48	9	753	89	11	23
(Mitoc_L55);(MRP-L28)	1	28	31	28	37	70	830	100	13	100
(Mitoc_L55);(MRP-L46)	1	28	31	28	37	70	1214	100	13	100
(Mitoc_L55);(Ribosomal_S10)	1	28	31	28	37	70	923	100	13	100
(MRP_L53);(Ribosomal_L10)	1	29	32	29	38	85	844	100	12	100
(MRP_L53);(Ribosomal_S18)	1	30	33	30	39	85	509	100	12	100
(MRP-63);(MRPL52)	1	30	33	30	39	72	385	100	12	100
(MRP-63);(Ribosomal_L10)	1	29	32	29	38	72	497	100	12	100
(MRP-63);(Ribosomal_L16)	1	29	32	29	38	72	323	100	12	100
(MRP-63);(Ribosomal_L27A)	1	29	32	29	38	72	521	100	12	100
(MRP-63);(Ribosomal_L30)	1	29	32	29	38	72	1222	100	12	100
(MRP-63);(Ribosomal_S18)	1	24	24	24	30	72	250	100	4	100
(MRP-L27);(MRP-L47)	1	36	39	40	49	22	1651	100	13	90
(MRP-L27);(Ribosomal_L23)	1	38	41	38	47	5	1457	98	12	100
(MRP-L27);(Ribosomal_L28)	1	29	32	29	38	77	503	100	12	100
(MRP-L27);(Ribosomal_L34)	1	38	41	38	47	22	438	98	12	100
(MRP-L28);(MRP-L46)	1	35	38	35	44	11	2236	100	16	100
(MRP-L28);(PBP)	1	9	9	13	13	22	876	89	11	69
(MRP-L28);(Ribosomal_S10)	1	30	33	30	39	72	1740	100	15	100
(MRP-L46);(Ribosomal_S10)	1	30	33	30	39	76	361	100	15	100
(MRP-L47);(MRP-L51)	1	29	32	29	38	82	234	100	12	100
(MRP-L47);(PDCD9)	1	29	32	29	38	83	561	100	12	100
(MRP-L47);(Ribosomal_L23)	1	45	48	45	54	2	1785	98	12	100
(MRP-L47);(Ribosomal_L28)	1	30	33	30	39	83	451	100	15	100
(MRP-L47);(Ribosomal_L34)	1	30	33	30	39	83	518	100	15	100
(MRP-L51);(Ribonucleas_3_3)_(dsrm)	1	30	33	30	39	82	368	100	12	100
(MRP-L51);(Ribosomal_L27A)	1	29	32	29	38	82	290	100	12	100
(MRP-L51);(Ribosomal_L28)	1	29	32	29	38	82	326	100	12	100
(MRP-L51);(Ribosomal_L35p)	1	29	32	29	38	80	399	100	12	100
(MRP-L51);(Ribosomal_L4)	1	29	32	29	38	82	1829	100	12	100
(MRPL52);(PBP)	1	10	10	15	21	81	503	100	10	67
(MRPL52);(Ribosomal_L20)	1	29	32	29	38	81	394	100	12	100
(MRPL52);(Ribosomal_L21p)	1	31	34	31	40	7	668	100	12	100
(MRPL52);(Ribosomal_L30)	1	29	32	31	40	81	1056	100	12	94
(MRP-S32);(Ribonucleas_3_3)_(dsrm)	1	29	32	29	38	69	680	100	16	100
(MRP-S32);(Ribosomal_L13)	1	29	32	29	38	30	294	100	12	100
(MRP-S32);(Ribosomal_L20)	1	28	31	28	37	69	866	100	13	100
(MRP-S32);(Ribosomal_L21p)	1	28	31	28	37	69	809	100	13	100
(MRP-S32);(Ribosomal_L22)	1	29	32	29	38	69	413	100	12	100
(PBP);(RF-1)	1	31	34	31	40	77	958	100	12	100
(PBP);(Ribosomal_L18p)	1	30	33	30	39	88	2744	100	12	100
(PBP);(Ribosomal_L27)	1	29	32	36	45	87	1811	100	12	81
(PBP);(Ribosomal_L27A)	1	29	32	34	43	88	255	100	12	85
(PBP);(Ribosomal_L35p)	1	29	32	29	38	80	1116	100	12	100
(PBP);(Ribosomal_S10)	1	30	33	30	39	76	644	100	12	100
(PDCD9);(Ribosomal_L17)	1	27	30	27	36	82	368	100	13	100
(PDCD9);(Ribosomal_L2)_(Ribosomal_L2_C)	1	29	32	29	38	85	777	100	12	100
(PDCD9);(Ribosomal_L23)	1	29	32	29	38	81	532	100	12	100
(PDCD9);(Ribosomal_L28)	1	29	32	29	38	83	825	100	12	100
(RF-1);(Ribosomal_L18p)	1	28	31	28	37	77	446	100	13	100
(RF-1);(Ribosomal_L27A)	1	30	33	30	39	77	1553	100	12	100
(Ribonucleas_3_3)_(dsrm);(Ribosomal_L13)	1	33	36	33	42	14	807	97	11	100
(Ribonucleas_3_3)_(dsrm);(Ribosomal_L20)	1	29	32	29	38	87	374	100	12	100
(Ribonucleas_3_3)_(dsrm);(Ribosomal_L21p)	1	29	32	29	38	77	319	100	12	100
(Ribosomal_L10);(Ribosomal_L11_N)_(Ribosomal_L11)	1	53	53	91	123	3	276	100	17	58
(Ribosomal_L10);(Ribosomal_L11_N)_(Ribosomal_L11)	2	15	15	91	123	85	224	100	13	16
(Ribosomal_L10);(Ribosomal_L16)	1	32	35	32	41	85	1231	100	14	100
(Ribosomal_L10);(Ribosomal_L37)	1	16	16	16	22	76	255	100	6	100
(Ribosomal_L10);(Ribosomal_S18)	1	29	32	30	39	85	236	100	9	97
(Ribosomal_L13);(Ribosomal_L21p)	1	6	6	17	17	23	248	100	17	35
(Ribosomal_L13);(Ribosomal_L22)	1	43	46	48	57	21	523	98	13	90
(Ribosomal_L13);(Ribosomal_L3)	1	205	278	217	290	3	367	92	7	94
(Ribosomal_L13);(Ribosomal_L3)	2	12	12	217	290	31	870	92	17	6
(Ribosomal_L13);(Ribosomal_S18)	1	30	33	30	39	85	2360	100	12	100
(Ribosomal_L14);(Ribosomal_L3)	1	218	291	226	317	0	436	92	9	96
(Ribosomal_L16);(Ribosomal_L30)	1	31	34	31	40	81	427	100	15	100
(Ribosomal_L16);(Ribosomal_L37)	1	27	29	28	37	20	393	100	10	96
(Ribosomal_L17);(Ribosomal_L19)	1	29	32	29	38	80	637	100	16	100
(Ribosomal_L17);(Ribosomal_L3)	1	33	36	38	65	29	597	100	14	87
(Ribosomal_L17);(TGS)_(tRNA_SAD)	1	27	30	27	36	89	746	100	13	100
(Ribosomal_L18p);(Ribosomal_L27)	1	31	34	41	51	6	1100	100	15	76
(Ribosomal_L18p);(Ribosomal_L27)	2	8	9	41	51	0	247	100	11	20
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_L9_N)_(Ribosomal_ L9_C)	1	69	69	124	168	40	237	100	20	56
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_S6)	1	29	29	49	80	0	314	97	3	59
(Ribosomal_L20);(Ribosomal_L22)	1	31	34	31	40	86	273	100	15	100
(Ribosomal_L21p);(Ribosomal_S18)	1	30	33	30	39	77	526	100	12	100
(Ribosomal_L22);(TGS)_(tRNA_SAD)	1	30	33	30	39	78	357	100	12	100
(Ribosomal_L27);(Ribosomal_S10)	1	30	33	30	39	76	395	100	12	100
(Ribosomal_L3);(TGS)_(tRNA_SAD)	1	30	33	30	39	82	575	100	12	100
(Ribosomal_L32p);(TGS)_(tRNA_SAD)	1	29	32	29	38	85	256	100	12	100
(Ribosomal_L33);(Ribosomal_L35p)	1	9	9	19	48	31	218	100	0	47
(Ribosomal_L4);(Ribosomal_L50)	1	29	32	38	47	80	1054	100	12	76
(Ribosomal_L4);(Ribosomal_L50)	2	9	9	38	47	9	1602	89	11	24
(Ribosomal_S10);(Ribosomal_S9)	1	45	45	62	93	13	391	100	4	73
(Ribosomal_S11);(Ribosomal_S21)	1	277	302	290	376	0	1076	100	14	96
(Ribosomal_S15);(Ribosomal_S17)	1	29	29	38	44	2	363	100	7	76
(Ribosomal_S15);(Ribosomal_S6)	1	31	31	41	47	2	365	100	6	76
(Ribosomal_S15);(Ribosomal_S6)	2	7	7	41	47	27	514	86	0	17
(Ribosomal_S16);(Ribosomal_S18)	1	29	29	29	35	84	568	100	7	100
(Ribosomal_S18);(Ribosomal_S21)	1	127	151	208	259	0	248	99	13	61
(Ribosomal_S18);(Ribosomal_S21)	2	29	29	208	259	1	626	100	7	14
(Ribosomal_S18);(Ribosomal_S5)_(Ribosomal_S5_C)	1	29	29	29	35	82	588	100	7	100
(Ribosomal_S2);(Ribosomal_S5)_(Ribosomal_S5_C)	1	84	97	102	133	6	516	77	10	82
(Ribosomal_S2);(Ribosomal_S5)_(Ribosomal_S5_C)	2	12	12	102	133	26	291	92	8	12
(Ribosomal_S2);(Ribosomal_S9)	1	38	38	38	44	24	1148	97	5	100
(7tm_1);(G-alpha)	1	54	54	63	63	5	1221	100	6	86
(7tm_1);(G-alpha)	2	8	8	63	63	21	1156	100	0	13
(G-alpha);(V-set)_(V-set)	1	48	48	48	48	43	540	100	2	100
(G-alpha);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	105	106	105	130	6	1299	100	7	100
(G-gamma);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	114	123	114	148	0	2084	100	16	100
(G-alpha);(Myc-LZ)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	8	8	8	8	51	1170	100	50	100
(G-gamma);(Myc-LZ)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	19	29	19	31	31	2229	100	79	100
(GP120);(ig)_(C2-set)	1	32	42	32	42	21	1039	100	33	100
(Ig_3)_(C1-set);(V-set)_(C1-set)	1	12	17	12	17	25	1889	100	76	100
(Ribosomal_L13);(Ribosomal_L6)_(Ribosomal_L6)	1	9	69	14	74	32	272	100	1	64
(Ribosomal_L16);(Ribosomal_L25p)	1	271	299	271	351	21	389	100	14	100
(Ribosomal_L18p);(Ribosomal_L5)_(Ribosomal_L5_C)	1	13	13	18	18	71	228	100	23	72
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L29)	1	203	216	203	216	0	765	90	12	100
(Sushi)_(Sushi);(Trypsin)	1	6	7	6	7	30	780	100	100	100
(V-set)_(C1-set);(V-set_2)_(C1-set)	1	282	328	283	331	11	1615	100	87	100
(V-set)_(C1-set);(V-set_2)_(C1-set)	2	24	32	283	331	14	366	0	0	8
(V-set)_(C1-set);(V-set_2)_(C1-set)	3	21	22	283	331	16	360	0	0	7
(V-set)_(C1-set);(V-set_2)_(C1-set)	4	8	8	283	331	36	217	0	0	3
(V-set)_(C1-set);(V-set_2)_(C1-set)	5	6	14	283	331	79	383	0	0	2
(V-set)_(C1-set);(V-set_2)_(C1-set)	6	6	6	283	331	67	481	0	0	2
(RuBisCO_large_N)_(RuBisCO_large);(RuBisCO_small)	1	20	44	21	57	11	1678	100	75	95
(RuBisCO_large_N)_(RuBisCO_large);(RuBisCO_small)	2	18	42	21	57	11	792	98	79	86
(RuBisCO_large_N)_(RuBisCO_large);(RuBisCO_small)	3	17	41	21	57	11	445	98	80	81
(RuBisCO_large_N)_(RuBisCO_large);(RuBisCO_small)	4	6	11	21	57	47	267	100	82	29
(Proteasome);(Proteasome)_(Pr_beta_C)	1	83	361	87	484	3	1157	100	75	95
(Proteasome);(Proteasome)_(Pr_beta_C)	2	70	247	87	484	13	862	100	75	80
(Proteasome);(Proteasome)_(Pr_beta_C)	3	69	289	87	484	13	1376	100	73	79
(Proteasome);(Proteasome_A_N)_(Proteasome)	1	110	401	110	517	2	490	100	68	100
(Proteasome);(Proteasome_A_N)_(Proteasome)	2	110	401	110	517	2	428	100	67	100
(Proteasome)_(Pr_beta_C);(Proteasome_A_N)_(Proteasome)	1	87	264	87	484	4	617	100	69	100
(Proteasome)_(Pr_beta_C);(Proteasome_A_N)_(Proteasome)	2	87	362	87	484	8	603	100	72	100
(LRR_9);(RRM_1)	1	23	23	23	23	24	549	100	13	100
(MMS1_N)_(CPSF_A);(PHF5)	1	18	22	18	22	27	583	100	36	100
(MMS1_N)_(CPSF_A);(SF3b10)	1	25	29	25	29	22	1693	100	38	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_5);(RNA_pol_Rpb6)	1	9	17	11	19	80	2102	100	71	82
(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol _Rpb2_6)_(RNA_pol_Rpb2_7);(RNA_pol_Rpb6)	1	18	39	18	39	80	264	100	67	100
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_Rpb1 _4)_(RNA_pol_Rpb1_5)	1	137	178	143	188	41	988	100	38	96
(KOW)_(Ribosomal_L14e);(Ribosomal_L13)	1	171	184	171	184	0	770	88	9	100
(KOW)_(Ribosomal_L14e);(Ribosomal_L18A)	1	175	188	175	188	3	941	88	10	100
(KOW)_(Ribosomal_L14e);(Ribosomal_L6)_(Ribosomal_L6)	1	127	140	128	141	5	462	84	12	99
(KOW)_(Ribosomal_L14e);(Ribosomal_L6e)	1	101	114	101	114	2	491	82	15	100
(KOW)_(Ribosomal_L27e);(Ribosomal_L34e)	1	194	207	196	209	4	664	89	9	99
(KOW)_(Ribosomal_L27e);(Ribosomal_L7Ae)	1	193	206	193	206	3	509	89	9	100
(KOW)_(Ribosomal_L27e);(Ribosomal_L7Ae)	2	144	157	193	206	2	277	86	11	75
(Ribosomal_L13);(Ribosomal_L18A)	1	193	206	193	206	22	692	89	9	100
(Ribosomal_L13);(Ribosomal_L35Ae)	1	151	154	162	175	2	239	92	11	93
(Ribosomal_L13e);(Ribosomal_L15e)	1	195	208	195	208	24	509	89	10	100
(Ribosomal_L13e);(Ribosomal_L18)	1	156	169	163	176	5	234	87	9	96
(Ribosomal_L13e);(Ribosomal_L27A)	1	195	208	195	208	2	1458	89	9	100
(Ribosomal_L13e);(Ribosomal_L29)	1	201	214	201	214	2	910	90	9	100
(Ribosomal_L13e);(Ribosomal_L36e)	1	191	204	191	204	4	642	89	9	100
(Ribosomal_L13e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	106	106	113	113	31	220	96	7	94
(Ribosomal_L14);(Ribosomal_L24e)	1	206	280	206	280	0	526	92	9	100
(Ribosomal_L15e);(Ribosomal_L29)	1	197	210	197	210	7	355	90	10	100
(Ribosomal_L15e);(Ribosomal_L36e)	1	196	209	196	209	7	528	89	10	100
(Ribosomal_L15e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	193	206	195	208	37	268	89	10	99
(Ribosomal_L15e);(Ribosomal_L7Ae)	1	180	253	180	253	2	941	91	9	100
(Ribosomal_L18);(Ribosomal_L27A)	1	197	210	201	214	3	864	90	9	98
(Ribosomal_L18);(Ribosomal_L30_N)_(Ribosomal_L30)	1	176	189	177	190	5	257	88	9	99
(Ribosomal_L18);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	201	214	201	214	0	1115	90	10	100
(Ribosomal_L18A);(Ribosomal_L21e)	1	193	206	193	206	0	888	89	9	100
(Ribosomal_L18A);(Ribosomal_L30_N)_(Ribosomal_L30)	1	198	211	198	211	22	476	90	10	100
(Ribosomal_L18A);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	93	106	95	108	35	243	80	14	98
(Ribosomal_L18A);(Ribosomal_L6)_(Ribosomal_L6)	1	194	207	197	210	5	310	89	10	98
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_L37ae)	1	208	280	208	281	0	1255	92	7	100
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_L7Ae)	1	151	164	151	164	1	299	87	11	100
(Ribosomal_L21e);(Ribosomal_L30_N)_(Ribosomal_L30)	1	194	207	194	207	0	598	89	9	100
(Ribosomal_L21e);(Ribosomal_L5e)_(Ribosomal_L18_c)	1	186	199	186	199	0	857	89	9	100
(Ribosomal_L22);(Ribosomal_L6e)	1	6	6	7	7	82	266	100	0	86
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L39)	1	168	181	176	189	2	222	88	10	95
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L7Ae)	1	149	162	151	164	9	372	86	11	99
(Ribosomal_L24e);(Ribosomal_L3)	1	193	206	193	206	0	582	89	11	100
(Ribosomal_L26)_(KOW)_(Ribosomal_L26);(Ribosomal_L4)_(Ribos_ L4_asso_C)	1	30	30	33	33	47	219	90	17	91
(Ribosomal_L27A);(Ribosomal_L36e)	1	155	168	163	176	4	240	87	9	95
(Ribosomal_L29);(Ribosomal_L37e)	1	53	53	61	61	28	215	100	4	87
(Ribosomal_L30_N)_(Ribosomal_L30);(Ribosomal_L4)_(Ribos_L4_a sso_C)	1	192	205	192	205	11	1001	89	10	100
(Ribosomal_L32e);(Ribosomal_L6e)	1	95	108	95	108	2	511	81	15	100
(Ribosomal_L34e);(Ribosomal_L7Ae)	1	194	207	196	209	4	258	89	9	99
(Ribosomal_L35Ae);(Ribosomal_L6e)	1	108	121	108	121	2	859	83	15	100
(Ribosomal_L36e);(Ribosomal_L7Ae)	1	161	174	161	174	4	304	87	11	100
(Ribosomal_L37ae);(Ribosomal_L7Ae)	1	10	10	12	12	58	271	100	20	83
(Ribosomal_L37e);(Ribosomal_L39)	1	132	145	140	153	21	225	85	11	94
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_L5e)_(Ribosomal_L 18_c)	1	180	193	183	196	39	241	89	10	98
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S17e)	1	203	216	208	221	2	492	89	7	98
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S5)_(Ribosomal_S5_C)	1	12	12	30	55	47	371	100	0	40
(KH_2)_(Ribosomal_S3_C);(S10_plectin)	1	198	211	198	211	0	876	89	6	100
(KH_2)_(Ribosomal_S3_C);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)_(WD40)	1	176	189	180	193	3	488	88	6	98
(Ribosom_S12_S23);(Ribosomal_S17_N)_(Ribosomal_S17)	1	216	229	216	229	2	467	90	10	100
(Ribosom_S12_S23);(Ribosomal_S30)	1	166	179	167	180	10	444	87	8	99
(Ribosomal_L7Ae);(Ribosomal_S13_N)_(Ribosomal_S15)	1	75	75	91	91	29	355	99	0	82
(Ribosomal_L7Ae);(Ribosomal_S27)	1	76	89	82	95	3	538	75	10	93
(Ribosomal_L7Ae);(Ribosomal_S27)	2	5	5	82	95	84	550	100	0	6
(Ribosomal_L7Ae);(S10_plectin)	1	23	23	30	30	20	284	91	4	77
(Ribosomal_S11);(Ribosomal_S26e)	1	193	206	193	206	2	1107	89	6	100
(Ribosomal_S11);(Ribosomal_S3Ae)	1	237	250	239	252	0	859	91	8	99
(Ribosomal_S13);(Ribosomal_S19e)	1	210	223	215	228	4	440	90	9	98
(Ribosomal_S13);(Ribosomal_S25)	1	195	208	197	210	0	464	89	8	99
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S17_N)_(Ribosom al_S17)	1	21	21	22	22	34	252	100	14	95
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S27e)	1	235	248	238	251	0	715	91	8	99
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S7e)	1	66	66	80	80	2	234	98	12	82
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S8)	1	59	61	72	74	66	209	82	11	82
(Ribosomal_S14);(Ribosomal_S19)	1	245	273	267	350	6	336	100	14	92
(Ribosomal_S14);(S10_plectin)	1	186	199	189	202	0	294	88	6	98
(Ribosomal_S17_N)_(Ribosomal_S17);(Ribosomal_S8e)	1	227	240	227	240	3	720	90	8	100
(Ribosomal_S17_N)_(Ribosomal_S17);(RS4NT)_(S4)_(Ribosomal_S4 e)_(KOW)_(40S_S4_C)	1	7	7	8	8	78	214	100	29	88
(Ribosomal_S17e);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)	1	187	200	187	200	10	529	89	8	100
(Ribosomal_S19e);(Ribosomal_S7)	1	7	7	11	11	79	265	100	43	64
(Ribosomal_S19e);(Ribosomal_S9)	1	135	135	145	145	2	281	99	11	93
(Ribosomal_S21e);(Ribosomal_S27e)	1	78	91	79	92	36	427	77	9	99
(Ribosomal_S21e);(Ribosomal_S5)_(Ribosomal_S5_C)	1	207	220	207	220	2	1316	90	8	100
(Ribosomal_S21e);(Ribosomal_S8)	1	176	189	178	191	3	266	88	8	99
(Ribosomal_S24e);(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_S4_ C)	1	219	232	219	232	0	536	91	9	100
(Ribosomal_S24e);(S4)	1	104	117	113	126	30	227	82	11	92