| (Peripla_BP_1) | 1 | 21 | 28 | 25 | 39 | 14 | 1477 | 93 | 82 | 84 |
| (EMG1) | 1 | 33 | 36 | 34 | 38 | 21 | 1134 | 100 | 25 | 97 |
| (NOP5NT)_(Nop) | 1 | 23 | 23 | 23 | 23 | 39 | 1794 | 100 | 4 | 100 |
| (WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD4 0)_(WD40)_(WD40)_(Utp12) | 1 | 22 | 22 | 22 | 22 | 44 | 463 | 100 | 5 | 100 |
| (Hydrolase_6)_(Hydrolase_like) | 1 | 20 | 32 | 24 | 39 | 12 | 1184 | 69 | 97 | 83 |
| (NGF) | 1 | 21 | 24 | 21 | 24 | 14 | 1481 | 96 | 100 | 100 |
| (IspD) | 1 | 24 | 47 | 24 | 47 | 10 | 1770 | 91 | 94 | 100 |
| (Sld5) | 1 | 20 | 21 | 20 | 21 | 10 | 1332 | 95 | 57 | 100 |
| (MIF) | 1 | 34 | 130 | 34 | 130 | 11 | 1106 | 98 | 95 | 100 |
| (MR_MLE_N)_(MR_MLE_C) | 1 | 131 | 239 | 166 | 289 | 9 | 1654 | 87 | 92 | 79 |
| (MR_MLE_N)_(MR_MLE_C) | 2 | 129 | 232 | 166 | 289 | 8 | 1272 | 81 | 95 | 78 |
| (MR_MLE_N)_(MR_MLE_C) | 3 | 106 | 190 | 166 | 289 | 8 | 630 | 66 | 90 | 64 |
| (ATP-synt_B) | 1 | 28 | 28 | 29 | 29 | 6 | 1865 | 100 | 0 | 97 |
| (PEP_mutase) | 1 | 20 | 32 | 20 | 32 | 10 | 3158 | 97 | 100 | 100 |
| (Semialdhyde_dh)_(Semialdhyde_dhC) | 1 | 41 | 81 | 41 | 84 | 6 | 2486 | 89 | 100 | 100 |
| (Semialdhyde_dh)_(Semialdhyde_dhC) | 2 | 20 | 30 | 41 | 84 | 10 | 704 | 77 | 97 | 49 |
| (SIS)_(SIS) | 1 | 20 | 27 | 20 | 27 | 10 | 2186 | 96 | 96 | 100 |
| (TetR_N)_(TetR_C_1) | 1 | 32 | 80 | 35 | 85 | 15 | 2420 | 99 | 94 | 91 |
| (TP_methylase) | 1 | 34 | 121 | 35 | 129 | 8 | 2792 | 97 | 93 | 97 |
| (DHquinase_II) | 1 | 23 | 72 | 24 | 76 | 7 | 899 | 89 | 93 | 96 |
| (DHquinase_II) | 2 | 20 | 71 | 24 | 76 | 7 | 650 | 96 | 94 | 83 |
| (UDPG_MGDP_dh_N)_(UDPG_MGDP_dh)_(UDPG_MGDP_dh_C) | 1 | 27 | 43 | 27 | 43 | 11 | 2846 | 98 | 100 | 100 |
| (NAP) | 1 | 21 | 26 | 21 | 26 | 9 | 2482 | 100 | 88 | 100 |
| (Citrate_synt) | 1 | 49 | 82 | 49 | 82 | 10 | 3820 | 100 | 82 | 100 |
| (ROK) | 1 | 24 | 30 | 25 | 31 | 9 | 1714 | 83 | 100 | 96 |
| (SnoaL_4) | 1 | 20 | 22 | 20 | 22 | 9 | 1199 | 100 | 100 | 100 |
| (Ras) | 1 | 34 | 175 | 438 | 837 | 28 | 328 | 1 | 18 | 8 |
| (Ras) | 2 | 30 | 41 | 438 | 837 | 19 | 534 | 12 | 32 | 7 |
| (Ras) | 3 | 20 | 32 | 438 | 837 | 19 | 682 | 25 | 47 | 5 |
| (V-set)_(C1-set) | 1 | 2934 | 3789 | 3506 | 4663 | 0 | 1651 | 100 | 83 | 84 |
| (V-set)_(C1-set) | 2 | 476 | 645 | 3506 | 4663 | 6 | 353 | 0 | 4 | 14 |
| (V-set)_(C1-set) | 3 | 215 | 275 | 3506 | 4663 | 13 | 481 | 0 | 4 | 6 |
| (V-set)_(C1-set) | 4 | 151 | 171 | 3506 | 4663 | 6 | 224 | 1 | 2 | 4 |
| (V-set)_(C1-set) | 5 | 136 | 232 | 3506 | 4663 | 11 | 407 | 0 | 0 | 4 |
| (V-set)_(C1-set) | 6 | 92 | 119 | 3506 | 4663 | 14 | 379 | 7 | 18 | 3 |
| (V-set)_(C1-set) | 7 | 86 | 110 | 3506 | 4663 | 17 | 385 | 2 | 11 | 2 |
| (V-set)_(C1-set) | 8 | 85 | 91 | 3506 | 4663 | 20 | 750 | 3 | 10 | 2 |
| (V-set)_(C1-set) | 9 | 81 | 101 | 3506 | 4663 | 13 | 387 | 2 | 8 | 2 |
| (V-set)_(C1-set) | 10 | 72 | 82 | 3506 | 4663 | 11 | 356 | 1 | 15 | 2 |
| (V-set)_(C1-set) | 11 | 68 | 81 | 3506 | 4663 | 14 | 479 | 1 | 5 | 2 |
| (V-set)_(C1-set) | 12 | 61 | 142 | 3506 | 4663 | 14 | 288 | 0 | 1 | 2 |
| (V-set)_(C1-set) | 13 | 60 | 68 | 3506 | 4663 | 14 | 336 | 1 | 7 | 2 |
| (V-set)_(C1-set) | 14 | 54 | 62 | 3506 | 4663 | 22 | 302 | 0 | 2 | 2 |
| (V-set)_(C1-set) | 15 | 53 | 63 | 3506 | 4663 | 14 | 520 | 0 | 10 | 2 |
| (V-set)_(C1-set) | 16 | 51 | 78 | 3506 | 4663 | 10 | 573 | 0 | 4 | 1 |
| (V-set)_(C1-set) | 17 | 51 | 65 | 3506 | 4663 | 12 | 316 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 18 | 49 | 60 | 3506 | 4663 | 50 | 891 | 10 | 42 | 1 |
| (V-set)_(C1-set) | 19 | 49 | 62 | 3506 | 4663 | 12 | 304 | 0 | 5 | 1 |
| (V-set)_(C1-set) | 20 | 48 | 71 | 3506 | 4663 | 10 | 443 | 0 | 1 | 1 |
| (V-set)_(C1-set) | 21 | 48 | 65 | 3506 | 4663 | 21 | 942 | 2 | 6 | 1 |
| (V-set)_(C1-set) | 22 | 48 | 56 | 3506 | 4663 | 16 | 283 | 0 | 4 | 1 |
| (V-set)_(C1-set) | 23 | 46 | 60 | 3506 | 4663 | 10 | 283 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 24 | 45 | 53 | 3506 | 4663 | 17 | 377 | 4 | 23 | 1 |
| (V-set)_(C1-set) | 25 | 44 | 69 | 3506 | 4663 | 10 | 636 | 0 | 1 | 1 |
| (V-set)_(C1-set) | 26 | 40 | 44 | 3506 | 4663 | 14 | 327 | 0 | 2 | 1 |
| (V-set)_(C1-set) | 27 | 39 | 60 | 3506 | 4663 | 19 | 603 | 35 | 28 | 1 |
| (V-set)_(C1-set) | 28 | 39 | 48 | 3506 | 4663 | 11 | 500 | 2 | 4 | 1 |
| (V-set)_(C1-set) | 29 | 38 | 48 | 3506 | 4663 | 18 | 280 | 0 | 2 | 1 |
| (V-set)_(C1-set) | 30 | 38 | 41 | 3506 | 4663 | 16 | 323 | 0 | 7 | 1 |
| (V-set)_(C1-set) | 31 | 36 | 125 | 3506 | 4663 | 22 | 251 | 46 | 25 | 1 |
| (V-set)_(C1-set) | 32 | 36 | 38 | 3506 | 4663 | 15 | 400 | 5 | 3 | 1 |
| (V-set)_(C1-set) | 33 | 35 | 38 | 3506 | 4663 | 12 | 356 | 0 | 8 | 1 |
| (V-set)_(C1-set) | 34 | 34 | 35 | 3506 | 4663 | 19 | 283 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 35 | 34 | 42 | 3506 | 4663 | 14 | 359 | 19 | 38 | 1 |
| (V-set)_(C1-set) | 36 | 33 | 37 | 3506 | 4663 | 17 | 297 | 0 | 16 | 1 |
| (V-set)_(C1-set) | 37 | 33 | 35 | 3506 | 4663 | 23 | 360 | 0 | 6 | 1 |
| (V-set)_(C1-set) | 38 | 32 | 42 | 3506 | 4663 | 17 | 419 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 39 | 31 | 41 | 3506 | 4663 | 16 | 452 | 0 | 7 | 1 |
| (V-set)_(C1-set) | 40 | 31 | 38 | 3506 | 4663 | 17 | 274 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 41 | 31 | 35 | 3506 | 4663 | 18 | 263 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 42 | 30 | 34 | 3506 | 4663 | 16 | 261 | 0 | 3 | 1 |
| (V-set)_(C1-set) | 43 | 29 | 34 | 3506 | 4663 | 14 | 457 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 44 | 28 | 37 | 3506 | 4663 | 19 | 325 | 0 | 5 | 1 |
| (V-set)_(C1-set) | 45 | 28 | 34 | 3506 | 4663 | 50 | 444 | 0 | 15 | 1 |
| (V-set)_(C1-set) | 46 | 27 | 36 | 3506 | 4663 | 9 | 388 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 47 | 27 | 34 | 3506 | 4663 | 34 | 267 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 48 | 27 | 29 | 3506 | 4663 | 18 | 496 | 0 | 3 | 1 |
| (V-set)_(C1-set) | 49 | 26 | 34 | 3506 | 4663 | 19 | 465 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 50 | 26 | 28 | 3506 | 4663 | 15 | 346 | 0 | 14 | 1 |
| (V-set)_(C1-set) | 51 | 26 | 28 | 3506 | 4663 | 18 | 282 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 52 | 25 | 29 | 3506 | 4663 | 20 | 286 | 3 | 7 | 1 |
| (V-set)_(C1-set) | 53 | 25 | 26 | 3506 | 4663 | 15 | 333 | 0 | 19 | 1 |
| (V-set)_(C1-set) | 54 | 25 | 28 | 3506 | 4663 | 15 | 259 | 0 | 4 | 1 |
| (V-set)_(C1-set) | 55 | 24 | 59 | 3506 | 4663 | 13 | 307 | 2 | 3 | 1 |
| (V-set)_(C1-set) | 56 | 24 | 34 | 3506 | 4663 | 24 | 352 | 0 | 9 | 1 |
| (V-set)_(C1-set) | 57 | 24 | 25 | 3506 | 4663 | 24 | 420 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 58 | 24 | 26 | 3506 | 4663 | 33 | 280 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 59 | 23 | 36 | 3506 | 4663 | 14 | 294 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 60 | 23 | 28 | 3506 | 4663 | 21 | 441 | 0 | 4 | 1 |
| (V-set)_(C1-set) | 61 | 23 | 25 | 3506 | 4663 | 18 | 316 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 62 | 23 | 25 | 3506 | 4663 | 27 | 550 | 0 | 8 | 1 |
| (V-set)_(C1-set) | 63 | 22 | 28 | 3506 | 4663 | 21 | 323 | 0 | 11 | 1 |
| (V-set)_(C1-set) | 64 | 22 | 27 | 3506 | 4663 | 16 | 433 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 65 | 22 | 25 | 3506 | 4663 | 10 | 380 | 4 | 0 | 1 |
| (V-set)_(C1-set) | 66 | 22 | 24 | 3506 | 4663 | 17 | 680 | 0 | 17 | 1 |
| (V-set)_(C1-set) | 67 | 22 | 23 | 3506 | 4663 | 16 | 312 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 68 | 21 | 43 | 3506 | 4663 | 20 | 283 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 69 | 21 | 29 | 3506 | 4663 | 57 | 378 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 70 | 21 | 25 | 3506 | 4663 | 17 | 267 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 71 | 21 | 24 | 3506 | 4663 | 22 | 317 | 4 | 8 | 1 |
| (V-set)_(C1-set) | 72 | 21 | 24 | 3506 | 4663 | 17 | 295 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 73 | 21 | 23 | 3506 | 4663 | 14 | 322 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 74 | 21 | 29 | 3506 | 4663 | 18 | 404 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 75 | 21 | 27 | 3506 | 4663 | 23 | 260 | 0 | 11 | 1 |
| (V-set)_(C1-set) | 76 | 20 | 33 | 3506 | 4663 | 24 | 319 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 77 | 20 | 34 | 3506 | 4663 | 19 | 429 | 0 | 6 | 1 |
| (V-set)_(C1-set) | 78 | 20 | 26 | 3506 | 4663 | 19 | 462 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 79 | 20 | 25 | 3506 | 4663 | 17 | 252 | 0 | 4 | 1 |
| (V-set)_(C1-set) | 80 | 20 | 22 | 3506 | 4663 | 20 | 295 | 0 | 0 | 1 |
| (V-set)_(C1-set) | 81 | 20 | 22 | 3506 | 4663 | 22 | 365 | 5 | 5 | 1 |
| (V-set)_(C1-set) | 82 | 20 | 22 | 3506 | 4663 | 14 | 250 | 0 | 0 | 1 |
| (Prot_ATP_ID_OB)_(AAA)_(AAA_lid_3) | 1 | 55 | 55 | 55 | 55 | 13 | 3244 | 100 | 24 | 100 |
| (OsmC) | 1 | 27 | 34 | 29 | 36 | 8 | 3114 | 100 | 94 | 93 |
| (Cytochrom_C1) | 1 | 33 | 56 | 43 | 81 | 48 | 296 | 84 | 68 | 77 |
| (PDCD9) | 1 | 30 | 33 | 30 | 39 | 21 | 1455 | 100 | 15 | 100 |
| (DPPIV_rep)_(DPPIV_N)_(Peptidase_S9) | 1 | 24 | 125 | 24 | 125 | 53 | 2179 | 94 | 99 | 100 |
| (LSM) | 1 | 89 | 101 | 90 | 102 | 0 | 768 | 100 | 53 | 99 |
| (RNase_PH)_(RNase_PH_C) | 1 | 31 | 45 | 32 | 46 | 11 | 1569 | 100 | 80 | 97 |
| (RNase_PH)_(RNase_PH_C) | 2 | 29 | 43 | 32 | 46 | 9 | 1093 | 98 | 77 | 91 |
| (ABC_tran) | 1 | 39 | 48 | 74 | 96 | 14 | 1369 | 90 | 65 | 53 |
| (ABM) | 1 | 34 | 46 | 44 | 58 | 4 | 1377 | 89 | 98 | 77 |
| (Adenylsucc_synt) | 1 | 21 | 55 | 21 | 55 | 22 | 2625 | 93 | 98 | 100 |
| (AlaDh_PNT_N)_(AlaDh_PNT_C) | 1 | 22 | 39 | 27 | 46 | 24 | 1766 | 95 | 97 | 81 |
| (Ank_2)_(Ank)_(Ion_trans) | 1 | 20 | 20 | 20 | 20 | 52 | 2538 | 100 | 5 | 100 |
| (PIN) | 1 | 28 | 33 | 32 | 36 | 6 | 1196 | 97 | 91 | 88 |
| (RAMPs) | 1 | 30 | 32 | 36 | 40 | 8 | 1473 | 94 | 22 | 83 |
| (Cob_adeno_trans) | 1 | 23 | 35 | 24 | 36 | 10 | 1042 | 100 | 94 | 96 |
| (CutA1) | 1 | 26 | 37 | 26 | 37 | 7 | 1104 | 92 | 97 | 100 |
| (MoCF_biosynth) | 1 | 20 | 32 | 21 | 33 | 10 | 749 | 88 | 94 | 95 |
| (Creatinase_N)_(Peptidase_M24) | 1 | 21 | 33 | 21 | 33 | 13 | 1949 | 97 | 97 | 100 |
| (CTP_synth_N)_(GATase) | 1 | 29 | 33 | 29 | 75 | 41 | 1373 | 100 | 36 | 100 |
| (CTP_synth_N)_(GATase) | 2 | 28 | 32 | 29 | 75 | 41 | 539 | 97 | 31 | 97 |
| (CTP_synth_N)_(GATase) | 3 | 26 | 30 | 29 | 75 | 41 | 713 | 100 | 33 | 90 |
| (DegT_DnrJ_EryC1) | 1 | 38 | 71 | 38 | 71 | 10 | 2407 | 93 | 99 | 100 |
| (DHQ_synthase) | 1 | 20 | 30 | 20 | 30 | 18 | 1438 | 73 | 97 | 100 |
| (DHquinase_I) | 1 | 23 | 41 | 23 | 41 | 8 | 1062 | 90 | 93 | 100 |
| (dUTPase) | 1 | 59 | 143 | 62 | 150 | 9 | 1619 | 99 | 99 | 95 |
| (DXP_reductoisom)_(DXP_redisom_C)_(DXPR_C) | 1 | 24 | 75 | 24 | 75 | 12 | 1726 | 100 | 100 | 100 |
| (FGGY_N)_(FGGY_C) | 1 | 31 | 64 | 39 | 86 | 10 | 1505 | 75 | 95 | 79 |
| (Flavin_Reduct) | 1 | 31 | 46 | 32 | 47 | 7 | 2830 | 98 | 100 | 97 |
| (Flavoprotein) | 1 | 22 | 41 | 22 | 41 | 8 | 687 | 98 | 90 | 100 |
| (14-3-3) | 1 | 113 | 443 | 117 | 480 | 7 | 1012 | 99 | 77 | 97 |
| (14-3-3) | 2 | 35 | 68 | 117 | 480 | 7 | 544 | 1 | 21 | 30 |
| (14-3-3) | 3 | 29 | 52 | 117 | 480 | 7 | 555 | 0 | 15 | 25 |
| (14-3-3) | 4 | 20 | 301 | 117 | 480 | 64 | 563 | 0 | 0 | 17 |
| (Acetyltransf_1) | 1 | 54 | 79 | 182 | 280 | 9 | 2727 | 95 | 100 | 30 |
| (bZIP_1) | 1 | 24 | 29 | 26 | 31 | 0 | 988 | 100 | 86 | 92 |
| (C1-set) | 1 | 21 | 30 | 368 | 976 | 67 | 380 | 0 | 0 | 6 |
| (C1-set) | 2 | 20 | 28 | 368 | 976 | 6 | 298 | 0 | 21 | 5 |
| (MHC_I)_(C1-set) | 1 | 67 | 124 | 521 | 1198 | 33 | 661 | 2 | 6 | 13 |
| (MHC_I)_(C1-set) | 2 | 41 | 60 | 521 | 1198 | 66 | 290 | 0 | 0 | 8 |
| (MHC_I)_(C1-set) | 3 | 40 | 104 | 521 | 1198 | 72 | 520 | 0 | 0 | 8 |
| (MHC_I)_(C1-set) | 4 | 36 | 119 | 521 | 1198 | 25 | 492 | 0 | 0 | 7 |
| (MHC_I)_(C1-set) | 5 | 31 | 209 | 521 | 1198 | 41 | 292 | 0 | 0 | 6 |
| (MHC_I)_(C1-set) | 6 | 29 | 77 | 521 | 1198 | 41 | 286 | 0 | 0 | 6 |
| (MHC_I)_(C1-set) | 7 | 28 | 192 | 521 | 1198 | 69 | 362 | 0 | 0 | 5 |
| (MHC_I)_(C1-set) | 8 | 26 | 54 | 521 | 1198 | 41 | 315 | 0 | 0 | 5 |
| (Histone) | 1 | 251 | 374 | 274 | 459 | 12 | 604 | 99 | 53 | 92 |
| (PK_Tyr_Ser-Thr) | 1 | 39 | 121 | 448 | 1984 | 18 | 1284 | 39 | 50 | 9 |
| (Pkinase) | 1 | 59 | 145 | 806 | 4415 | 15 | 750 | 16 | 47 | 7 |
| (Pkinase) | 2 | 51 | 138 | 806 | 4415 | 11 | 1400 | 57 | 86 | 6 |
| (Pkinase) | 3 | 27 | 165 | 806 | 4415 | 23 | 516 | 1 | 0 | 3 |
| (Pkinase) | 4 | 20 | 41 | 806 | 4415 | 11 | 890 | 12 | 17 | 2 |
| (Thioredoxin) | 1 | 32 | 56 | 159 | 223 | 13 | 570 | 41 | 75 | 20 |
| (Thioredoxin) | 2 | 22 | 29 | 159 | 223 | 18 | 580 | 10 | 28 | 14 |
| (Cytochrome_B)_(Cytochrom_B_C) | 1 | 48 | 78 | 54 | 100 | 13 | 1166 | 88 | 62 | 89 |
| (Epimerase) | 1 | 47 | 83 | 73 | 122 | 8 | 1292 | 86 | 93 | 64 |
| (Peptidase_M16)_(Peptidase_M16_C) | 1 | 48 | 86 | 58 | 100 | 6 | 1903 | 100 | 74 | 83 |
| (Peptidase_M16)_(Peptidase_M16_C) | 2 | 33 | 55 | 58 | 100 | 21 | 750 | 87 | 71 | 57 |
| (2-Hacid_dh_C) | 1 | 87 | 147 | 87 | 147 | 10 | 2797 | 93 | 93 | 100 |
| (4HBT) | 1 | 90 | 149 | 91 | 152 | 4 | 1281 | 97 | 99 | 99 |
| (4HBT) | 2 | 37 | 68 | 91 | 152 | 5 | 540 | 78 | 82 | 41 |
| (4HBT) | 3 | 30 | 59 | 91 | 152 | 10 | 261 | 75 | 86 | 33 |
| (4HBT) | 4 | 22 | 26 | 91 | 152 | 12 | 400 | 100 | 96 | 24 |
| (4HBT) | 5 | 22 | 26 | 91 | 152 | 12 | 750 | 100 | 96 | 24 |
| (NUDIX) | 1 | 36 | 68 | 140 | 551 | 11 | 1188 | 56 | 79 | 26 |
| (NUDIX) | 2 | 22 | 41 | 140 | 551 | 8 | 950 | 51 | 49 | 16 |
| (ubiquitin) | 1 | 23 | 41 | 317 | 480 | 48 | 587 | 32 | 51 | 7 |
| (ubiquitin) | 2 | 23 | 27 | 317 | 480 | 33 | 286 | 0 | 11 | 7 |
| (ubiquitin) | 3 | 21 | 24 | 317 | 480 | 13 | 557 | 46 | 50 | 7 |
| (Lipocalin) | 1 | 23 | 103 | 199 | 700 | 9 | 484 | 65 | 9 | 12 |
| (Lipocalin) | 2 | 21 | 75 | 199 | 700 | 21 | 430 | 5 | 3 | 11 |
| (Lys) | 1 | 32 | 831 | 163 | 1631 | 59 | 564 | 0 | 8 | 20 |
| (Lys) | 2 | 22 | 1000 | 163 | 1631 | 39 | 351 | 0 | 3 | 13 |
| (SH3_1) | 1 | 25 | 38 | 144 | 304 | 10 | 381 | 18 | 26 | 17 |
| (SH3_1) | 2 | 23 | 42 | 144 | 304 | 15 | 377 | 10 | 21 | 16 |
| (Cytochrom_B562) | 1 | 21 | 66 | 50 | 111 | 73 | 480 | 67 | 83 | 42 |
| (IL8) | 1 | 42 | 68 | 79 | 135 | 7 | 742 | 84 | 74 | 53 |
| (IL8) | 2 | 30 | 58 | 79 | 135 | 9 | 839 | 84 | 50 | 38 |
| (V-set)_(V-set) | 1 | 25 | 29 | 129 | 165 | 18 | 1726 | 93 | 93 | 19 |
| (V-set)_(V-set) | 2 | 25 | 28 | 129 | 165 | 23 | 489 | 4 | 4 | 19 |
| (V-set) | 1 | 492 | 618 | 1276 | 1551 | 2 | 798 | 96 | 56 | 39 |
| (V-set) | 2 | 121 | 161 | 1276 | 1551 | 5 | 482 | 8 | 13 | 9 |
| (V-set) | 3 | 76 | 80 | 1276 | 1551 | 8 | 411 | 5 | 15 | 6 |
| (V-set) | 4 | 42 | 46 | 1276 | 1551 | 0 | 289 | 2 | 2 | 3 |
| (V-set) | 5 | 39 | 48 | 1276 | 1551 | 6 | 542 | 8 | 10 | 3 |
| (V-set) | 6 | 28 | 29 | 1276 | 1551 | 10 | 396 | 10 | 17 | 2 |
| (V-set) | 7 | 25 | 30 | 1276 | 1551 | 12 | 502 | 10 | 33 | 2 |
| (V-set) | 8 | 25 | 29 | 1276 | 1551 | 8 | 475 | 10 | 10 | 2 |
| (V-set) | 9 | 24 | 27 | 1276 | 1551 | 8 | 438 | 0 | 11 | 2 |
| (V-set) | 10 | 23 | 37 | 1276 | 1551 | 9 | 438 | 8 | 30 | 2 |
| (V-set) | 11 | 22 | 24 | 1276 | 1551 | 10 | 394 | 4 | 17 | 2 |
| (V-set) | 12 | 21 | 25 | 1276 | 1551 | 20 | 412 | 4 | 32 | 2 |
| (GP120) | 1 | 101 | 113 | 272 | 371 | 58 | 405 | 94 | 23 | 37 |
| (GP120) | 2 | 31 | 75 | 272 | 371 | 69 | 445 | 1 | 1 | 11 |
| (PDZ) | 1 | 37 | 51 | 202 | 288 | 13 | 637 | 16 | 20 | 18 |
| (PDZ) | 2 | 31 | 41 | 202 | 288 | 9 | 434 | 2 | 5 | 15 |
| (PDZ) | 3 | 20 | 21 | 202 | 288 | 11 | 1033 | 62 | 71 | 10 |
| (Phage_lysozyme) | 1 | 26 | 568 | 73 | 690 | 14 | 738 | 0 | 5 | 36 |
| (Serpin) | 1 | 42 | 63 | 166 | 242 | 0 | 2321 | 97 | 86 | 25 |
| (Trypsin) | 1 | 27 | 367 | 542 | 2574 | 14 | 545 | 0 | 0 | 5 |
| (Trypsin) | 2 | 26 | 77 | 542 | 2574 | 2 | 2824 | 99 | 78 | 5 |
| (AA_kinase) | 1 | 23 | 49 | 65 | 130 | 13 | 1223 | 98 | 78 | 35 |
| (AA_kinase) | 2 | 23 | 49 | 65 | 130 | 13 | 1692 | 92 | 69 | 35 |
| (AA_kinase) | 3 | 21 | 47 | 65 | 130 | 11 | 1566 | 100 | 100 | 32 |
| (P-II) | 1 | 55 | 77 | 55 | 79 | 9 | 1127 | 100 | 97 | 100 |
| (RuBisCO_large_N)_(RuBisCO_large) | 1 | 56 | 118 | 58 | 120 | 9 | 4046 | 99 | 83 | 97 |
| (RuBisCO_large_N)_(RuBisCO_large) | 2 | 39 | 79 | 58 | 120 | 33 | 476 | 96 | 67 | 67 |
| (RuBisCO_large_N)_(RuBisCO_large) | 3 | 37 | 77 | 58 | 120 | 33 | 456 | 96 | 69 | 64 |
| (PCNA_N)_(PCNA_C) | 1 | 78 | 125 | 87 | 134 | 11 | 657 | 88 | 66 | 90 |
| (AAA)_(AAA_lid_3) | 1 | 30 | 41 | 48 | 60 | 4 | 801 | 39 | 7 | 62 |
| (AAA)_(AAA_lid_3) | 2 | 23 | 24 | 48 | 60 | 17 | 1872 | 96 | 17 | 48 |
| (Proteasome_A_N)_(Proteasome) | 1 | 123 | 415 | 124 | 514 | 2 | 1348 | 100 | 68 | 99 |
| (Proteasome) | 1 | 147 | 465 | 154 | 573 | 2 | 686 | 100 | 71 | 95 |
| (Proteasome) | 2 | 134 | 450 | 154 | 573 | 3 | 932 | 98 | 69 | 87 |
| (Proteasome) | 3 | 129 | 446 | 154 | 573 | 2 | 729 | 99 | 71 | 84 |
| (CLP_protease) | 1 | 53 | 105 | 57 | 110 | 10 | 1380 | 98 | 75 | 93 |
| (CLP_protease) | 2 | 31 | 75 | 57 | 110 | 30 | 733 | 87 | 80 | 54 |
| (MCM_N)_(MCM_OB)_(MCM)_(MCM_lid) | 1 | 33 | 33 | 35 | 35 | 17 | 3255 | 100 | 42 | 94 |
| (MCM_N)_(MCM_OB)_(MCM)_(MCM_lid) | 2 | 31 | 31 | 35 | 35 | 30 | 3377 | 100 | 39 | 89 |
| (RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD) | 1 | 200 | 299 | 200 | 301 | 29 | 1820 | 100 | 57 | 100 |
| (GFP) | 1 | 104 | 206 | 309 | 816 | 7 | 1242 | 72 | 75 | 34 |
| (GFP) | 2 | 103 | 203 | 309 | 816 | 11 | 850 | 60 | 55 | 33 |
| (GFP) | 3 | 58 | 103 | 309 | 816 | 10 | 758 | 18 | 25 | 19 |
| (GFP) | 4 | 29 | 58 | 309 | 816 | 9 | 702 | 12 | 19 | 9 |
| (GFP) | 5 | 22 | 38 | 309 | 816 | 10 | 320 | 0 | 0 | 7 |
| (ABC_membrane)_(ABC_tran) | 1 | 81 | 105 | 82 | 106 | 9 | 5706 | 97 | 65 | 99 |
| (IRK)_(IRK_C) | 1 | 49 | 69 | 51 | 71 | 12 | 2629 | 100 | 41 | 96 |
| (ABC_tran)_(BCA_ABC_TP_C) | 1 | 20 | 21 | 25 | 30 | 15 | 807 | 86 | 57 | 80 |
| (OEP)_(OEP) | 1 | 25 | 35 | 27 | 38 | 13 | 2501 | 100 | 89 | 93 |
| (Globin) | 1 | 96 | 453 | 214 | 1391 | 9 | 790 | 100 | 94 | 45 |
| (Globin) | 2 | 70 | 173 | 214 | 1391 | 13 | 322 | 97 | 65 | 33 |
| (Globin) | 3 | 68 | 241 | 214 | 1391 | 9 | 496 | 98 | 65 | 32 |
| (Globin) | 4 | 20 | 48 | 214 | 1391 | 19 | 350 | 0 | 0 | 9 |
| (Abhydrolase_3) | 1 | 23 | 43 | 77 | 151 | 11 | 1139 | 81 | 77 | 30 |
| (Abhydrolase_3) | 2 | 21 | 47 | 77 | 151 | 10 | 823 | 45 | 40 | 27 |
| (ATP-synt_C) | 1 | 181 | 204 | 182 | 212 | 7 | 1368 | 100 | 52 | 99 |
| (Pyr_redox_2) | 1 | 59 | 79 | 79 | 136 | 10 | 2100 | 92 | 90 | 75 |
| (Iso_dh) | 1 | 97 | 208 | 99 | 230 | 8 | 2791 | 99 | 94 | 98 |
| (Actin) | 1 | 141 | 142 | 257 | 343 | 12 | 865 | 96 | 21 | 55 |
| (Actin) | 2 | 124 | 124 | 257 | 343 | 16 | 481 | 98 | 19 | 48 |
| (Actin) | 3 | 20 | 31 | 257 | 343 | 82 | 264 | 0 | 0 | 8 |
| (Acetyltransf_3) | 1 | 34 | 64 | 47 | 81 | 9 | 1002 | 81 | 69 | 72 |
| (Carboxyl_trans) | 1 | 32 | 62 | 32 | 62 | 11 | 4609 | 98 | 79 | 100 |
| (ACP_syn_III)_(ACP_syn_III_C) | 1 | 50 | 104 | 55 | 110 | 10 | 2664 | 96 | 96 | 91 |
| (ACPS) | 1 | 27 | 38 | 27 | 38 | 18 | 750 | 87 | 76 | 100 |
| (ACR_tran) | 1 | 62 | 149 | 63 | 164 | 10 | 3087 | 97 | 78 | 98 |
| (TPP_enzyme_N)_(TPP_enzyme_M)_(TPP_enzyme_C) | 1 | 70 | 189 | 70 | 196 | 11 | 3432 | 98 | 96 | 100 |
| (TPP_enzyme_N)_(TPP_enzyme_M)_(TPP_enzyme_C) | 2 | 34 | 110 | 70 | 196 | 15 | 1435 | 98 | 98 | 49 |
| (TPP_enzyme_N)_(TPP_enzyme_M)_(TPP_enzyme_C) | 3 | 32 | 106 | 70 | 196 | 7 | 621 | 98 | 98 | 46 |
| (Robl_LC7) | 1 | 25 | 31 | 34 | 39 | 7 | 1140 | 94 | 58 | 74 |
| (Bromodomain) | 1 | 26 | 148 | 230 | 1762 | 38 | 738 | 6 | 20 | 11 |
| (Bromodomain) | 2 | 23 | 66 | 230 | 1762 | 9 | 937 | 44 | 58 | 10 |
| (Dynein_light) | 1 | 28 | 44 | 30 | 45 | 12 | 841 | 91 | 64 | 93 |
| (Tubulin)_(Tubulin_C) | 1 | 217 | 489 | 245 | 561 | 31 | 1502 | 97 | 61 | 89 |
| (Tubulin)_(Tubulin_C) | 2 | 70 | 71 | 245 | 561 | 24 | 420 | 94 | 31 | 29 |
| (EF-hand_7)_(EF-hand_7) | 1 | 28 | 46 | 167 | 274 | 14 | 538 | 4 | 15 | 17 |
| (Lectin_C) | 1 | 30 | 46 | 132 | 229 | 16 | 1899 | 93 | 76 | 23 |
| (Lectin_C) | 2 | 25 | 34 | 132 | 229 | 10 | 895 | 82 | 53 | 19 |
| (TGF_beta) | 1 | 94 | 116 | 99 | 121 | 4 | 1324 | 95 | 84 | 95 |
| (ADH_N)_(ADH_zinc_N) | 1 | 123 | 276 | 125 | 278 | 10 | 1548 | 93 | 94 | 98 |
| (ADH_N)_(ADH_zinc_N) | 2 | 62 | 93 | 125 | 278 | 11 | 545 | 78 | 73 | 50 |
| (ADH_N)_(ADH_zinc_N) | 3 | 57 | 86 | 125 | 278 | 11 | 644 | 81 | 77 | 46 |
| (adh_short_C2) | 1 | 458 | 950 | 473 | 1035 | 5 | 1603 | 94 | 93 | 97 |
| (adh_short_C2) | 2 | 448 | 946 | 473 | 1035 | 4 | 1494 | 94 | 95 | 95 |
| (adh_short_C2) | 3 | 262 | 653 | 473 | 1035 | 4 | 638 | 91 | 89 | 55 |
| (adh_short_C2) | 4 | 31 | 46 | 473 | 1035 | 17 | 301 | 2 | 0 | 7 |
| (adh_short_C2) | 5 | 27 | 38 | 473 | 1035 | 15 | 312 | 0 | 0 | 6 |
| (adh_short_C2) | 6 | 24 | 27 | 473 | 1035 | 14 | 308 | 0 | 4 | 5 |
| (adh_short_C2) | 7 | 22 | 107 | 473 | 1035 | 17 | 422 | 0 | 1 | 5 |
| (ketoacyl-synt)_(Ketoacyl-synt_C)_(KAsynt_C_assoc) | 1 | 24 | 45 | 24 | 45 | 17 | 2628 | 93 | 93 | 100 |
| (FMN_dh) | 1 | 27 | 114 | 27 | 117 | 12 | 1460 | 91 | 97 | 100 |
| (Acyl-CoA_dh_N)_(Acyl-CoA_dh_M)_(Acyl-CoA_dh_1) | 1 | 70 | 97 | 70 | 98 | 10 | 1818 | 91 | 92 | 100 |
| (Acyl-CoA_dh_N)_(Acyl-CoA_dh_M)_(Acyl-CoA_dh_1) | 2 | 68 | 95 | 70 | 98 | 10 | 1951 | 88 | 92 | 97 |
| (Acyl-CoA_dh_N)_(Acyl-CoA_dh_M)_(Acyl-CoA_dh_1) | 3 | 22 | 30 | 70 | 98 | 15 | 252 | 87 | 97 | 31 |
| (AIRS)_(AIRS_C) | 1 | 30 | 44 | 31 | 45 | 10 | 2321 | 86 | 98 | 97 |
| (Adaptin_N) | 1 | 26 | 29 | 28 | 31 | 14 | 1635 | 100 | 48 | 93 |
| (CBFD_NFYB_HMF) | 1 | 22 | 28 | 22 | 28 | 9 | 2202 | 100 | 93 | 100 |
| (Adeno_knob) | 1 | 41 | 66 | 41 | 66 | 6 | 1073 | 95 | 91 | 100 |
| (CBS)_(CBS) | 1 | 42 | 51 | 60 | 75 | 8 | 1286 | 96 | 94 | 70 |
| (ADH_N_assoc)_(ADH_N)_(ADH_zinc_N) | 1 | 23 | 31 | 23 | 31 | 17 | 1720 | 97 | 90 | 100 |
| (ADH_N_assoc)_(ADH_N)_(ADH_zinc_N) | 2 | 20 | 26 | 23 | 31 | 17 | 874 | 85 | 85 | 87 |
| (adh_short) | 1 | 101 | 196 | 116 | 224 | 7 | 2230 | 95 | 96 | 87 |
| (adh_short) | 2 | 24 | 28 | 116 | 224 | 10 | 1295 | 93 | 93 | 21 |
| (BTB_2) | 1 | 23 | 33 | 23 | 33 | 11 | 910 | 73 | 39 | 100 |
| (NAD_binding_2)_(NAD_binding_11) | 1 | 45 | 68 | 45 | 68 | 9 | 3301 | 91 | 76 | 100 |
| (AhpC-TSA)_(1-cysPrx_C) | 1 | 59 | 119 | 59 | 129 | 9 | 2093 | 97 | 96 | 100 |
| (AhpC-TSA)_(1-cysPrx_C) | 2 | 46 | 103 | 59 | 129 | 9 | 704 | 94 | 81 | 78 |
| (tRNA_anti-codon)_(tRNA-synt_2) | 1 | 41 | 81 | 41 | 81 | 12 | 4258 | 96 | 80 | 100 |
| (Sod_Fe_N)_(Sod_Fe_C) | 1 | 85 | 174 | 88 | 179 | 9 | 895 | 96 | 93 | 97 |
| (Ala_racemase_N)_(Ala_racemase_C) | 1 | 35 | 65 | 36 | 66 | 8 | 2888 | 100 | 85 | 97 |
| (Aldedh) | 1 | 159 | 374 | 159 | 391 | 8 | 2931 | 99 | 97 | 100 |
| (Aldedh) | 2 | 105 | 268 | 159 | 391 | 10 | 1101 | 89 | 87 | 66 |
| (Aldedh) | 3 | 103 | 266 | 159 | 391 | 11 | 946 | 89 | 86 | 65 |
| (DMRL_synthase) | 1 | 23 | 49 | 23 | 49 | 12 | 842 | 100 | 88 | 100 |
| (Aldolase_II) | 1 | 21 | 50 | 22 | 51 | 10 | 1232 | 98 | 94 | 95 |
| (Alpha_E1_glycop) | 1 | 28 | 28 | 46 | 48 | 46 | 569 | 100 | 0 | 61 |
| (Alpha_E1_glycop) | 2 | 21 | 21 | 46 | 48 | 51 | 417 | 100 | 0 | 46 |
| (Alpha_E2_glycop)_(Alpha_E1_glycop) | 1 | 24 | 24 | 26 | 26 | 33 | 532 | 100 | 0 | 92 |
| (bZIP_2) | 1 | 36 | 100 | 42 | 111 | 0 | 871 | 100 | 93 | 86 |
| (Lectin_legB) | 1 | 71 | 274 | 91 | 337 | 26 | 947 | 92 | 77 | 78 |
| (Lectin_legB) | 2 | 27 | 44 | 91 | 337 | 48 | 875 | 98 | 77 | 30 |
| (Lectin_legB) | 3 | 20 | 76 | 91 | 337 | 32 | 869 | 89 | 64 | 22 |
| (Amidohydro_1) | 1 | 28 | 49 | 96 | 199 | 10 | 2510 | 71 | 100 | 29 |
| (Amidohydro_1) | 2 | 24 | 43 | 96 | 199 | 17 | 1459 | 79 | 95 | 25 |
| (OTCace_N)_(OTCace) | 1 | 71 | 185 | 72 | 202 | 8 | 1077 | 98 | 98 | 99 |
| (Amidohydro_2) | 1 | 27 | 62 | 44 | 81 | 10 | 2699 | 100 | 87 | 61 |
| (Aminotran_1_2) | 1 | 210 | 467 | 213 | 491 | 5 | 3249 | 97 | 94 | 99 |
| (Aminotran_3) | 1 | 126 | 303 | 126 | 314 | 11 | 4701 | 97 | 95 | 100 |
| (Aminotran_3) | 2 | 32 | 72 | 126 | 314 | 18 | 1049 | 71 | 79 | 25 |
| (Aminotran_4) | 1 | 58 | 115 | 62 | 123 | 8 | 2340 | 98 | 94 | 94 |
| (Aminotran_5) | 1 | 98 | 198 | 100 | 207 | 7 | 2833 | 96 | 97 | 98 |
| (Hormone_recep) | 1 | 167 | 658 | 374 | 1827 | 8 | 1231 | 73 | 58 | 45 |
| (ANF_receptor) | 1 | 21 | 26 | 53 | 102 | 12 | 1379 | 100 | 100 | 40 |
| (ANF_receptor)_(Lig_chan-Glu_bd)_(Lig_chan) | 1 | 66 | 84 | 81 | 118 | 12 | 2326 | 100 | 38 | 81 |
| (ANF_receptor)_(NCD3G)_(7tm_3) | 1 | 21 | 21 | 33 | 36 | 25 | 2123 | 100 | 0 | 64 |
| (C1-set)_(C1-set) | 1 | 101 | 211 | 110 | 231 | 24 | 1149 | 94 | 85 | 92 |
| (C1-set)_(C1-set) | 2 | 24 | 29 | 110 | 231 | 27 | 885 | 21 | 41 | 22 |
| (Peptidase_C14) | 1 | 73 | 279 | 81 | 297 | 8 | 919 | 71 | 94 | 90 |
| (Peptidase_C14) | 2 | 34 | 150 | 81 | 297 | 4 | 2259 | 100 | 100 | 42 |
| (Peptidase_C1) | 1 | 20 | 28 | 155 | 348 | 29 | 527 | 11 | 18 | 13 |
| (JAB)_(MitMem_reg) | 1 | 59 | 59 | 61 | 62 | 11 | 3486 | 98 | 27 | 97 |
| (Ank_2)_(Ank_4)_(Ion_trans) | 1 | 40 | 43 | 40 | 43 | 10 | 3334 | 98 | 9 | 100 |
| (Ank_2)_(Ion_trans) | 1 | 70 | 73 | 70 | 73 | 4 | 2486 | 100 | 7 | 100 |
| (S_100)_(EF-hand_1) | 1 | 67 | 161 | 72 | 169 | 0 | 1457 | 99 | 64 | 93 |
| (Anoct_dimer)_(Anoctamin) | 1 | 36 | 37 | 39 | 40 | 19 | 2261 | 100 | 54 | 92 |
| (AP_endonuc_2) | 1 | 27 | 195 | 83 | 296 | 13 | 4279 | 94 | 97 | 33 |
| (AP_endonuc_2) | 2 | 27 | 195 | 83 | 296 | 16 | 1607 | 94 | 93 | 33 |
| (AP_endonuc_2) | 3 | 25 | 174 | 83 | 296 | 12 | 1604 | 93 | 92 | 30 |
| (Copper-bind) | 1 | 32 | 57 | 101 | 267 | 8 | 448 | 23 | 65 | 32 |
| (V-set)_(DUF1968) | 1 | 32 | 49 | 230 | 430 | 54 | 840 | 2 | 8 | 14 |
| (V-set)_(DUF1968) | 2 | 21 | 63 | 230 | 430 | 40 | 618 | 2 | 5 | 9 |
| (PA)_(Peptidase_M28)_(TFR_dimer) | 1 | 20 | 104 | 20 | 104 | 26 | 2436 | 98 | 86 | 100 |
| (Arginase) | 1 | 40 | 162 | 46 | 179 | 10 | 927 | 94 | 88 | 87 |
| (Bac_DNA_binding) | 1 | 27 | 44 | 28 | 45 | 12 | 2062 | 98 | 84 | 96 |
| (ELFV_dehydrog_N)_(ELFV_dehydrog) | 1 | 42 | 72 | 46 | 76 | 11 | 1343 | 99 | 74 | 91 |
| (ELFV_dehydrog_N)_(ELFV_dehydrog) | 2 | 37 | 63 | 46 | 76 | 16 | 1349 | 100 | 71 | 80 |
| (ELFV_dehydrog_N)_(ELFV_dehydrog) | 3 | 33 | 58 | 46 | 76 | 14 | 420 | 98 | 69 | 72 |
| (Phospholip_A2_1) | 1 | 25 | 42 | 103 | 328 | 30 | 717 | 38 | 83 | 24 |
| (Asparaginase)_(Asparaginase_C) | 1 | 39 | 111 | 39 | 111 | 13 | 2167 | 100 | 99 | 100 |
| (Asparaginase)_(Asparaginase_C) | 2 | 28 | 95 | 39 | 111 | 27 | 996 | 91 | 93 | 72 |
| (Asparaginase)_(Asparaginase_C) | 3 | 28 | 95 | 39 | 111 | 27 | 881 | 91 | 93 | 72 |
| (ATG8) | 1 | 32 | 43 | 85 | 106 | 13 | 783 | 21 | 19 | 38 |
| (ATP-synt_C)_(ATP-synt_C) | 1 | 39 | 42 | 39 | 42 | 19 | 1530 | 100 | 7 | 100 |
| (Ribonuc_red_sm) | 1 | 52 | 161 | 53 | 171 | 7 | 2453 | 94 | 84 | 98 |
| (Avidin) | 1 | 59 | 305 | 64 | 391 | 8 | 1615 | 96 | 95 | 92 |
| (Avidin) | 2 | 48 | 281 | 64 | 391 | 8 | 506 | 94 | 92 | 75 |
| (SHMT) | 1 | 47 | 138 | 48 | 140 | 9 | 4125 | 98 | 87 | 98 |
| (PDGF) | 1 | 50 | 58 | 52 | 60 | 23 | 1321 | 98 | 91 | 96 |
| (Synuclein) | 1 | 49 | 49 | 55 | 54 | 11 | 2583 | 100 | 12 | 89 |
| (Cas_Cas1) | 1 | 25 | 32 | 26 | 34 | 7 | 1573 | 100 | 88 | 96 |
| (DNA_pol3_beta)_(DNA_pol3_beta_2)_(DNA_pol3_beta_3) | 1 | 60 | 103 | 60 | 104 | 7 | 1209 | 99 | 82 | 100 |
| (Bac_luciferase) | 1 | 37 | 56 | 40 | 59 | 8 | 2317 | 80 | 82 | 92 |
| (Bac_rhodopsin) | 1 | 28 | 154 | 84 | 412 | 6 | 717 | 94 | 77 | 33 |
| (TNF) | 1 | 78 | 113 | 90 | 127 | 8 | 970 | 93 | 89 | 87 |
| (PsaA_PsaB) | 1 | 59 | 66 | 59 | 70 | 10 | 3468 | 100 | 30 | 100 |
| (bCoV_S1_N)_(bCoV_S1_RBD)_(CoV_S1_C) | 1 | 33 | 33 | 111 | 136 | 11 | 2973 | 100 | 9 | 30 |
| (CoV_S2) | 1 | 24 | 26 | 29 | 30 | 0 | 1555 | 100 | 73 | 83 |
| (bCoV_S1_N)_(bCoV_S1_RBD)_(CoV_S1_C)_(CoV_S2) | 1 | 615 | 615 | 722 | 722 | 10 | 4930 | 100 | 10 | 85 |
| (Bestrophin) | 1 | 28 | 46 | 28 | 46 | 8 | 3722 | 100 | 39 | 100 |
| (Beta_elim_lyase) | 1 | 20 | 53 | 20 | 53 | 9 | 2082 | 98 | 83 | 100 |
| (Collagen) | 1 | 34 | 67 | 44 | 76 | 0 | 923 | 100 | 93 | 77 |
| (Pyr_redox_2)_(Pyr_redox_dim) | 1 | 90 | 213 | 90 | 213 | 11 | 3387 | 96 | 99 | 100 |
| (BMC) | 1 | 48 | 75 | 49 | 76 | 4 | 962 | 100 | 76 | 98 |
| (BMC) | 2 | 22 | 27 | 49 | 76 | 22 | 274 | 52 | 0 | 45 |
| (BTB) | 1 | 45 | 116 | 47 | 122 | 5 | 1772 | 85 | 88 | 96 |
| (GP41) | 1 | 189 | 251 | 244 | 349 | 0 | 947 | 94 | 41 | 77 |
| (C1q) | 1 | 25 | 36 | 25 | 36 | 18 | 938 | 100 | 92 | 100 |
| (Peptidase_S8) | 1 | 49 | 230 | 153 | 471 | 35 | 285 | 0 | 0 | 32 |
| (Fusion_gly) | 1 | 23 | 47 | 63 | 106 | 14 | 1880 | 91 | 87 | 37 |
| (Fusion_gly) | 2 | 21 | 28 | 63 | 106 | 0 | 1863 | 100 | 93 | 33 |
| (Hemagglutinin) | 1 | 190 | 507 | 271 | 627 | 0 | 726 | 94 | 89 | 70 |
| (Hemagglutinin) | 2 | 163 | 439 | 271 | 627 | 4 | 2763 | 98 | 93 | 60 |
| (Hepatitis_core) | 1 | 28 | 38 | 30 | 40 | 14 | 1959 | 100 | 26 | 93 |
| (Hepatitis_core) | 2 | 26 | 36 | 30 | 40 | 15 | 637 | 97 | 19 | 87 |
| (Insulin) | 1 | 35 | 355 | 49 | 399 | 0 | 671 | 99 | 77 | 71 |
| (Neur) | 1 | 54 | 227 | 57 | 239 | 12 | 1623 | 98 | 88 | 95 |
| (p450) | 1 | 25 | 138 | 367 | 1228 | 11 | 821 | 10 | 7 | 7 |
| (Rhv) | 1 | 261 | 356 | 302 | 416 | 5 | 1736 | 100 | 31 | 86 |
| (Rhv) | 2 | 261 | 353 | 302 | 416 | 4 | 1505 | 100 | 30 | 86 |
| (Rhv) | 3 | 256 | 355 | 302 | 416 | 5 | 3534 | 99 | 28 | 85 |
| (PNP_UDP_1) | 1 | 55 | 213 | 143 | 510 | 7 | 1842 | 100 | 96 | 38 |
| (PNP_UDP_1) | 2 | 42 | 157 | 143 | 510 | 16 | 1153 | 94 | 85 | 29 |
| (PNP_UDP_1) | 3 | 42 | 79 | 143 | 510 | 15 | 1627 | 97 | 85 | 29 |
| (PNP_UDP_1) | 4 | 41 | 192 | 143 | 510 | 8 | 1330 | 97 | 94 | 29 |
| (Ca_hom_mod) | 1 | 24 | 24 | 24 | 24 | 9 | 2298 | 100 | 25 | 100 |
| (Calici_coat)_(Calici_coat_C) | 1 | 77 | 168 | 85 | 178 | 3 | 1838 | 92 | 83 | 91 |
| (CARD) | 1 | 20 | 20 | 40 | 42 | 7 | 453 | 95 | 10 | 50 |
| (CRISPR_Cas2) | 1 | 22 | 30 | 24 | 32 | 7 | 1391 | 97 | 90 | 92 |
| (Cas_Csy3) | 1 | 37 | 37 | 37 | 37 | 7 | 1922 | 100 | 3 | 100 |
| (Catalase)_(Catalase-rel) | 1 | 29 | 64 | 29 | 65 | 11 | 3222 | 95 | 97 | 100 |
| (Catalase)_(Catalase-rel) | 2 | 28 | 63 | 29 | 65 | 12 | 4654 | 98 | 97 | 97 |
| (Hfq) | 1 | 24 | 65 | 24 | 65 | 8 | 764 | 100 | 94 | 100 |
| (MHC_II_beta)_(C1-set) | 1 | 24 | 27 | 126 | 173 | 43 | 533 | 19 | 4 | 19 |
| (DNA_topoisoIV) | 1 | 29 | 60 | 29 | 60 | 28 | 1483 | 98 | 73 | 100 |
| (CDC48_N)_(CDC48_2)_(AAA)_(AAA_lid_3)_(AAA)_(AAA_lid_3) | 1 | 43 | 43 | 43 | 43 | 12 | 3442 | 100 | 2 | 100 |
| (Pterin_bind) | 1 | 30 | 105 | 33 | 111 | 9 | 1316 | 88 | 94 | 91 |
| (PALP) | 1 | 91 | 317 | 117 | 378 | 10 | 1876 | 84 | 83 | 78 |
| (CesT) | 1 | 22 | 23 | 22 | 23 | 9 | 1323 | 83 | 87 | 100 |
| (Chal_sti_synt_N)_(Chal_sti_synt_C) | 1 | 62 | 115 | 62 | 115 | 11 | 2653 | 97 | 96 | 100 |
| (Response_reg) | 1 | 39 | 64 | 177 | 299 | 8 | 933 | 58 | 34 | 22 |
| (Response_reg) | 2 | 32 | 58 | 177 | 299 | 5 | 518 | 22 | 34 | 18 |
| (Response_reg) | 3 | 21 | 41 | 177 | 299 | 15 | 466 | 2 | 0 | 12 |
| (Response_reg) | 4 | 21 | 30 | 177 | 299 | 7 | 584 | 30 | 63 | 12 |
| (Chloroa_b-bind) | 1 | 25 | 28 | 51 | 62 | 2 | 535 | 100 | 25 | 49 |
| (PsaL) | 1 | 21 | 26 | 24 | 29 | 21 | 786 | 85 | 42 | 88 |
| (Photo_RC) | 1 | 68 | 237 | 68 | 259 | 0 | 4773 | 100 | 75 | 100 |
| (PsbM) | 1 | 26 | 81 | 28 | 83 | 10 | 670 | 89 | 36 | 93 |
| (Clp_N)_(Clp_N)_(AAA)_(AAA_lid_9)_(AAA_2)_(ClpB_D2-small) | 1 | 52 | 53 | 56 | 57 | 10 | 3057 | 94 | 26 | 93 |
| (CN_hydrolase) | 1 | 30 | 67 | 32 | 76 | 13 | 2540 | 97 | 84 | 94 |
| (cNMP_binding)_(HTH_Crp_2) | 1 | 69 | 124 | 70 | 129 | 8 | 1882 | 98 | 94 | 99 |
| (SnoaL_2) | 1 | 46 | 53 | 93 | 178 | 3 | 1066 | 87 | 92 | 49 |
| (SnoaL_2) | 2 | 32 | 106 | 93 | 178 | 7 | 1008 | 90 | 92 | 34 |
| (COesterase) | 1 | 36 | 309 | 70 | 514 | 25 | 932 | 89 | 83 | 51 |
| (Connexin) | 1 | 20 | 22 | 24 | 25 | 12 | 1250 | 100 | 14 | 83 |
| (Cu-oxidase_3)_(Cu-oxidase) | 1 | 24 | 185 | 24 | 198 | 8 | 1998 | 98 | 85 | 100 |
| (HTH_3) | 1 | 47 | 90 | 92 | 137 | 6 | 1168 | 93 | 89 | 51 |
| (Sod_Cu) | 1 | 59 | 168 | 93 | 223 | 27 | 687 | 94 | 84 | 63 |
| (Redoxin) | 1 | 39 | 53 | 57 | 73 | 8 | 750 | 77 | 91 | 68 |
| (Gp_dh_N)_(Gp_dh_C) | 1 | 99 | 198 | 99 | 198 | 10 | 1973 | 94 | 94 | 100 |
| (Gp_dh_N)_(Gp_dh_C) | 2 | 98 | 197 | 99 | 198 | 12 | 1323 | 91 | 94 | 99 |
| (Gp_dh_N)_(Gp_dh_C) | 3 | 97 | 196 | 99 | 198 | 34 | 483 | 91 | 93 | 98 |
| (Phycobilisome) | 1 | 31 | 84 | 40 | 97 | 7 | 1525 | 100 | 92 | 78 |
| (Phycobilisome) | 2 | 26 | 80 | 40 | 97 | 9 | 506 | 89 | 92 | 65 |
| (Phycobilisome) | 3 | 21 | 62 | 40 | 97 | 21 | 949 | 77 | 82 | 52 |
| (Cpn10) | 1 | 22 | 29 | 23 | 29 | 7 | 762 | 97 | 79 | 96 |
| (Cpn60_TCP1) | 1 | 97 | 129 | 126 | 165 | 7 | 1558 | 100 | 62 | 77 |
| (Cpn60_TCP1) | 2 | 51 | 63 | 126 | 165 | 13 | 696 | 95 | 32 | 40 |
| (HSP20) | 1 | 27 | 34 | 49 | 63 | 10 | 1397 | 97 | 85 | 55 |
| (CTP_transf_like) | 1 | 24 | 106 | 65 | 187 | 10 | 1099 | 82 | 63 | 37 |
| (CTP_transf_like) | 2 | 23 | 104 | 65 | 187 | 33 | 577 | 87 | 93 | 35 |
| (CTP_transf_like) | 3 | 22 | 38 | 65 | 187 | 14 | 990 | 79 | 82 | 34 |
| (Cupin_1)_(Cupin_1) | 1 | 35 | 58 | 35 | 64 | 10 | 2459 | 93 | 91 | 100 |
| (Cupin_2) | 1 | 54 | 79 | 61 | 90 | 5 | 1539 | 90 | 94 | 89 |
| (Cys_Met_Meta_PP) | 1 | 51 | 122 | 52 | 125 | 22 | 1574 | 95 | 98 | 98 |
| (Cys_Met_Meta_PP) | 2 | 51 | 123 | 52 | 125 | 14 | 2432 | 99 | 100 | 98 |
| (Cys_Met_Meta_PP) | 3 | 49 | 121 | 52 | 125 | 10 | 865 | 95 | 98 | 94 |
| (LHC) | 1 | 31 | 37 | 31 | 37 | 2 | 694 | 100 | 43 | 100 |
| (LHC) | 2 | 31 | 37 | 31 | 37 | 6 | 513 | 100 | 41 | 100 |
| (LHC) | 3 | 24 | 30 | 31 | 37 | 2 | 263 | 100 | 47 | 77 |
| (DAHP_synth_1) | 1 | 29 | 131 | 30 | 135 | 9 | 2038 | 97 | 98 | 97 |
| (Dala_Dala_lig_N)_(Dala_Dala_lig_C) | 1 | 31 | 59 | 31 | 60 | 20 | 1425 | 86 | 95 | 100 |
| (DapB_N)_(DapB_C) | 1 | 23 | 36 | 23 | 36 | 11 | 1247 | 94 | 86 | 100 |
| (DapB_N)_(DapB_C) | 2 | 21 | 33 | 23 | 36 | 11 | 1499 | 94 | 79 | 91 |
| (dCache_1) | 1 | 28 | 45 | 40 | 67 | 5 | 1092 | 56 | 76 | 70 |
| (GST_N)_(GST_C_3) | 1 | 91 | 284 | 95 | 319 | 12 | 1323 | 96 | 92 | 96 |
| (DHDPS) | 1 | 104 | 256 | 105 | 263 | 7 | 1434 | 99 | 94 | 99 |
| (DHDPS) | 2 | 78 | 194 | 105 | 263 | 10 | 958 | 84 | 76 | 74 |
| (Thymidylat_synt) | 1 | 61 | 255 | 61 | 265 | 10 | 2159 | 93 | 96 | 100 |
| (Dimerisation)_(Methyltransf_2) | 1 | 29 | 67 | 29 | 68 | 11 | 4314 | 99 | 88 | 100 |
| (Dimerisation2)_(Methyltransf_2) | 1 | 25 | 46 | 25 | 46 | 11 | 3496 | 83 | 96 | 100 |
| (DJ-1_PfpI) | 1 | 29 | 116 | 57 | 167 | 8 | 1665 | 92 | 86 | 51 |
| (RNase_T) | 1 | 26 | 52 | 52 | 100 | 10 | 1546 | 71 | 90 | 50 |
| (dTDP_sugar_isom) | 1 | 29 | 43 | 29 | 43 | 13 | 1580 | 98 | 93 | 100 |
| (Fer4_NifH) | 1 | 22 | 52 | 24 | 55 | 31 | 1659 | 100 | 90 | 92 |
| (Thiolase_N)_(Thiolase_C) | 1 | 63 | 136 | 65 | 141 | 9 | 2563 | 99 | 89 | 97 |
| (Thiolase_N)_(Thiolase_C) | 2 | 36 | 89 | 65 | 141 | 31 | 310 | 92 | 84 | 55 |
| (Thiolase_N)_(Thiolase_C) | 3 | 36 | 89 | 65 | 141 | 31 | 646 | 92 | 84 | 55 |
| (Dyp_perox) | 1 | 30 | 71 | 40 | 99 | 14 | 1610 | 87 | 93 | 75 |
| (ECH_1) | 1 | 153 | 212 | 154 | 219 | 7 | 1498 | 97 | 94 | 99 |
| (ECH_1) | 2 | 48 | 58 | 154 | 219 | 15 | 516 | 76 | 86 | 31 |
| (Ion_trans) | 1 | 37 | 116 | 42 | 129 | 3 | 1703 | 100 | 74 | 88 |
| (MIP) | 1 | 33 | 58 | 40 | 64 | 16 | 1672 | 98 | 93 | 82 |
| (IF-2B) | 1 | 40 | 56 | 42 | 58 | 9 | 2029 | 100 | 62 | 95 |
| (IF-2B) | 2 | 28 | 42 | 42 | 58 | 20 | 686 | 100 | 57 | 67 |
| (IF-2B) | 3 | 26 | 39 | 42 | 58 | 20 | 281 | 100 | 56 | 62 |
| (IF-2B) | 4 | 26 | 27 | 42 | 58 | 16 | 607 | 100 | 33 | 62 |
| (Enolase_N)_(Enolase_C) | 1 | 44 | 97 | 45 | 98 | 11 | 1791 | 95 | 93 | 98 |
| (F_bP_aldolase) | 1 | 25 | 58 | 25 | 58 | 17 | 2110 | 100 | 100 | 100 |
| (FabA) | 1 | 24 | 54 | 25 | 55 | 12 | 1397 | 100 | 98 | 96 |
| (FBPase)_(FBPase_C) | 1 | 28 | 145 | 28 | 154 | 13 | 2193 | 92 | 100 | 100 |
| (FBPase)_(FBPase_C) | 2 | 26 | 138 | 28 | 154 | 11 | 1148 | 88 | 93 | 93 |
| (Fe-ADH) | 1 | 37 | 49 | 37 | 49 | 10 | 1432 | 84 | 80 | 100 |
| (Ferritin) | 1 | 121 | 585 | 130 | 816 | 3 | 1292 | 100 | 84 | 93 |
| (Ferritin) | 2 | 110 | 571 | 130 | 816 | 3 | 606 | 100 | 81 | 85 |
| (Ferritin) | 3 | 70 | 463 | 130 | 816 | 5 | 514 | 100 | 81 | 54 |
| (Ferritin) | 4 | 39 | 103 | 130 | 816 | 6 | 502 | 100 | 94 | 30 |
| (Filament) | 1 | 22 | 26 | 26 | 30 | 0 | 2530 | 88 | 96 | 85 |
| (TLV_coat) | 1 | 33 | 53 | 49 | 70 | 0 | 954 | 87 | 68 | 67 |
| (Flavi_glycoprot)_(Flavi_glycop_C) | 1 | 94 | 100 | 142 | 151 | 30 | 1162 | 89 | 26 | 66 |
| (Flavi_glycoprot)_(Flavi_glycop_C) | 2 | 43 | 44 | 142 | 151 | 37 | 813 | 86 | 0 | 30 |
| (Flavi_glycoprot)_(Flavi_glycop_C) | 3 | 37 | 38 | 142 | 151 | 14 | 533 | 87 | 0 | 26 |
| (Flavi_M) | 1 | 32 | 32 | 48 | 48 | 14 | 1040 | 100 | 0 | 67 |
| (Flavodoxin_2) | 1 | 41 | 129 | 41 | 138 | 8 | 1970 | 97 | 98 | 100 |
| (Spermine_synt_N)_(Spermine_synth) | 1 | 27 | 62 | 27 | 62 | 14 | 1739 | 100 | 94 | 100 |
| (FMN_red) | 1 | 42 | 58 | 43 | 59 | 8 | 1121 | 97 | 91 | 98 |
| (FMN_red) | 2 | 33 | 48 | 43 | 59 | 8 | 1132 | 88 | 85 | 77 |
| (FMN_red) | 3 | 31 | 46 | 43 | 59 | 8 | 596 | 87 | 80 | 72 |
| (Parvo_coat) | 1 | 55 | 65 | 86 | 100 | 11 | 2265 | 78 | 3 | 64 |
| (Parvo_coat) | 2 | 55 | 65 | 86 | 100 | 11 | 4916 | 78 | 3 | 64 |
| (Parvo_coat) | 3 | 55 | 65 | 86 | 100 | 11 | 1443 | 78 | 5 | 64 |
| (T2SSE) | 1 | 26 | 35 | 29 | 37 | 12 | 1438 | 91 | 49 | 90 |
| (FUR) | 1 | 27 | 33 | 29 | 35 | 12 | 1516 | 97 | 91 | 93 |
| (G6PD_N)_(G6PD_C) | 1 | 21 | 37 | 21 | 37 | 30 | 2313 | 92 | 62 | 100 |
| (PDEase_I) | 1 | 34 | 233 | 63 | 698 | 13 | 757 | 24 | 20 | 54 |
| (RVP) | 1 | 64 | 906 | 68 | 1196 | 10 | 1795 | 99 | 98 | 94 |
| (Gag_p24)_(Gag_p24_C) | 1 | 31 | 87 | 74 | 129 | 4 | 1177 | 100 | 85 | 42 |
| (Gag_p24)_(Gag_p24_C) | 2 | 21 | 21 | 74 | 129 | 12 | 408 | 67 | 33 | 28 |
| (Gal-bind_lectin) | 1 | 36 | 78 | 115 | 406 | 14 | 628 | 94 | 53 | 31 |
| (GFO_IDH_MocA)_(GFO_IDH_MocA_C) | 1 | 68 | 113 | 71 | 118 | 7 | 1615 | 89 | 92 | 96 |
| (GFO_IDH_MocA)_(GFO_IDH_MocA_C) | 2 | 25 | 55 | 71 | 118 | 10 | 600 | 85 | 67 | 35 |
| (GDP_Man_Dehyd) | 1 | 60 | 113 | 62 | 117 | 12 | 1166 | 92 | 96 | 97 |
| (GST_N)_(GST_C_2) | 1 | 23 | 53 | 26 | 56 | 14 | 1310 | 89 | 98 | 88 |
| (Gln-synt_N)_(Gln-synt_C) | 1 | 33 | 59 | 34 | 60 | 10 | 1596 | 100 | 69 | 97 |
| (Gln-synt_N)_(Gln-synt_C) | 2 | 22 | 45 | 34 | 60 | 25 | 2452 | 100 | 73 | 65 |
| (Glycolytic) | 1 | 32 | 79 | 33 | 80 | 14 | 1205 | 100 | 85 | 97 |
| (Glycolytic) | 2 | 30 | 75 | 33 | 80 | 14 | 1172 | 96 | 83 | 91 |
| (Glyoxalase) | 1 | 80 | 126 | 89 | 171 | 5 | 2379 | 98 | 90 | 90 |
| (GST_N)_(GST_C) | 1 | 84 | 109 | 85 | 110 | 8 | 1506 | 87 | 88 | 99 |
| (GST_N_3)_(GST_C) | 1 | 24 | 39 | 25 | 57 | 12 | 1217 | 100 | 90 | 96 |
| (GST_N_3)_(GST_C_2) | 1 | 42 | 71 | 76 | 123 | 11 | 1336 | 93 | 69 | 55 |
| (MutS_I)_(MutS_II)_(MutS_III)_(MutS_IV)_(MutS_III)_(MutS_V) | 1 | 21 | 34 | 21 | 34 | 21 | 2915 | 100 | 100 | 100 |
| (polyprenyl_synt) | 1 | 93 | 350 | 95 | 425 | 1 | 2352 | 97 | 99 | 98 |
| (Herpes_MCP) | 1 | 21 | 21 | 26 | 26 | 20 | 8432 | 100 | 0 | 81 |
| (Inositol_P) | 1 | 37 | 72 | 46 | 98 | 15 | 1418 | 96 | 76 | 80 |
| (HHH_5)_(Rad51) | 1 | 23 | 40 | 24 | 40 | 38 | 1496 | 55 | 25 | 96 |
| (His_Phos_1) | 1 | 24 | 49 | 62 | 126 | 10 | 890 | 90 | 43 | 39 |
| (HIT) | 1 | 35 | 103 | 36 | 107 | 8 | 1857 | 100 | 96 | 97 |
| (HLH) | 1 | 24 | 27 | 24 | 27 | 0 | 1115 | 100 | 85 | 100 |
| (HTH_1)_(LysR_substrate) | 1 | 36 | 49 | 37 | 50 | 7 | 1393 | 88 | 92 | 97 |
| (HTH_1)_(LysR_substrate) | 2 | 23 | 29 | 37 | 50 | 13 | 1412 | 93 | 86 | 62 |
| (HTH_5) | 1 | 24 | 36 | 28 | 43 | 17 | 1563 | 100 | 81 | 86 |
| (Pentaxin) | 1 | 22 | 29 | 26 | 35 | 33 | 703 | 100 | 59 | 85 |
| (IL17) | 1 | 23 | 31 | 23 | 31 | 22 | 2099 | 100 | 77 | 100 |
| (IlvN)_(IlvC) | 1 | 35 | 47 | 40 | 58 | 12 | 5706 | 96 | 62 | 88 |
| (IlvN)_(IlvC) | 2 | 21 | 25 | 40 | 58 | 29 | 636 | 76 | 4 | 52 |
| (IMPDH) | 1 | 40 | 84 | 42 | 86 | 17 | 2070 | 99 | 100 | 95 |
| (IMPDH)_(CBS)_(CBS)_(IMPDH) | 1 | 36 | 49 | 36 | 49 | 11 | 1938 | 100 | 55 | 100 |
| (IMPDH)_(CBS)_(CBS)_(IMPDH) | 2 | 31 | 42 | 36 | 49 | 20 | 1003 | 69 | 38 | 86 |
| (Innexin) | 1 | 26 | 26 | 26 | 26 | 12 | 1924 | 100 | 0 | 100 |
| (Ion_trans)_(cNMP_binding) | 1 | 28 | 32 | 28 | 32 | 12 | 2071 | 100 | 41 | 100 |
| (Isochorismatase) | 1 | 33 | 49 | 45 | 64 | 8 | 1537 | 94 | 94 | 73 |
| (Isochorismatase) | 2 | 20 | 29 | 45 | 64 | 14 | 708 | 72 | 62 | 44 |
| (Jacalin) | 1 | 28 | 79 | 53 | 118 | 18 | 589 | 90 | 94 | 53 |
| (ketoacyl-synt)_(Ketoacyl-synt_C) | 1 | 36 | 87 | 36 | 88 | 14 | 3114 | 99 | 100 | 100 |
| (Rho_N)_(Rho_RNA_bind)_(ATP-synt_ab) | 1 | 26 | 31 | 26 | 31 | 17 | 1496 | 90 | 39 | 100 |
| (Late_protein_L1) | 1 | 34 | 37 | 34 | 37 | 14 | 3422 | 97 | 32 | 100 |
| (Ldh_1_N)_(Ldh_1_C) | 1 | 143 | 296 | 145 | 309 | 8 | 2225 | 97 | 91 | 99 |
| (Ldh_1_N)_(Ldh_1_C) | 2 | 103 | 228 | 145 | 309 | 9 | 1011 | 95 | 85 | 71 |
| (Ldh_1_N)_(Ldh_1_C) | 3 | 85 | 195 | 145 | 309 | 9 | 1126 | 95 | 84 | 59 |
| (Levi_coat) | 1 | 24 | 33 | 29 | 74 | 6 | 3037 | 85 | 39 | 83 |
| (Levi_coat) | 2 | 21 | 42 | 29 | 74 | 6 | 425 | 98 | 29 | 72 |
| (Lig_chan-Glu_bd)_(Lig_chan) | 1 | 46 | 264 | 72 | 385 | 11 | 935 | 88 | 69 | 64 |
| (Lig_chan-Glu_bd)_(Lig_chan) | 2 | 22 | 164 | 72 | 385 | 21 | 262 | 1 | 0 | 31 |
| (Transthyretin) | 1 | 28 | 370 | 34 | 528 | 5 | 884 | 100 | 92 | 82 |
| (Transthyretin) | 2 | 25 | 147 | 34 | 528 | 20 | 394 | 98 | 86 | 74 |
| (Transthyretin) | 3 | 25 | 147 | 34 | 528 | 14 | 329 | 98 | 86 | 74 |
| (LON_substr_bdg)_(AAA)_(Lon_C) | 1 | 21 | 21 | 21 | 21 | 12 | 2960 | 100 | 43 | 100 |
| (LSDAT_euk)_(Ion_trans) | 1 | 47 | 47 | 48 | 48 | 24 | 3326 | 100 | 2 | 98 |
| (Lyase_1)_(FumaraseC_C) | 1 | 26 | 54 | 26 | 56 | 10 | 3045 | 98 | 98 | 100 |
| (Lyase_1)_(FumaraseC_C) | 2 | 25 | 49 | 26 | 56 | 10 | 2421 | 98 | 98 | 96 |
| (Lyase_1)_(FumaraseC_C) | 3 | 25 | 49 | 26 | 56 | 10 | 1860 | 98 | 98 | 96 |
| (Lyase_aromatic) | 1 | 20 | 47 | 20 | 48 | 10 | 3390 | 87 | 98 | 100 |
| (Lyase_aromatic) | 2 | 20 | 47 | 20 | 48 | 10 | 3972 | 100 | 100 | 100 |
| (LysR_substrate) | 1 | 55 | 78 | 57 | 95 | 7 | 1343 | 95 | 91 | 96 |
| (MarR) | 1 | 52 | 61 | 55 | 65 | 7 | 2529 | 95 | 93 | 95 |
| (MarR_2) | 1 | 37 | 65 | 40 | 68 | 7 | 2503 | 100 | 83 | 92 |
| (PemK_toxin) | 1 | 40 | 50 | 40 | 50 | 11 | 1080 | 98 | 96 | 100 |
| (Methyltransf_25)_(PRMT5_C) | 1 | 20 | 55 | 20 | 57 | 9 | 1768 | 93 | 95 | 100 |
| (Methyltransf_3) | 1 | 32 | 35 | 63 | 169 | 14 | 1986 | 91 | 94 | 51 |
| (TIM) | 1 | 101 | 214 | 113 | 248 | 8 | 1579 | 97 | 98 | 89 |
| (Porin_1) | 1 | 37 | 86 | 37 | 86 | 14 | 1524 | 98 | 92 | 100 |
| (NDK) | 1 | 66 | 172 | 66 | 173 | 29 | 880 | 94 | 97 | 100 |
| (NDK) | 2 | 49 | 146 | 66 | 173 | 29 | 728 | 94 | 75 | 74 |
| (Neur_chan_LBD) | 1 | 102 | 240 | 111 | 266 | 7 | 1569 | 100 | 78 | 92 |
| (Neur_chan_LBD)_(Neur_chan_memb) | 1 | 78 | 136 | 80 | 178 | 4 | 2351 | 100 | 67 | 98 |
| (Nitroreductase) | 1 | 80 | 127 | 80 | 127 | 5 | 3810 | 100 | 95 | 100 |
| (NTP_transferase) | 1 | 33 | 76 | 49 | 106 | 12 | 1514 | 84 | 95 | 67 |
| (Rieske)_(Ring_hydroxyl_A) | 1 | 23 | 66 | 23 | 66 | 14 | 1520 | 98 | 98 | 100 |
| (OMPdecase) | 1 | 56 | 259 | 56 | 274 | 8 | 1747 | 96 | 96 | 100 |
| (Peptidase_C30) | 1 | 61 | 778 | 66 | 871 | 9 | 1383 | 95 | 94 | 92 |
| (Peptidase_M20)_(M20_dimer)_(Peptidase_M20) | 1 | 28 | 37 | 31 | 41 | 8 | 2039 | 100 | 97 | 90 |
| (PfkB) | 1 | 66 | 125 | 117 | 223 | 10 | 1382 | 94 | 95 | 56 |
| (PfkB) | 2 | 24 | 36 | 117 | 223 | 14 | 1049 | 97 | 92 | 21 |
| (PGI) | 1 | 29 | 64 | 29 | 64 | 10 | 6061 | 97 | 100 | 100 |
| (Phos_pyr_kin) | 1 | 30 | 59 | 30 | 59 | 11 | 1809 | 86 | 93 | 100 |
| (PK)_(PK_C) | 1 | 62 | 141 | 63 | 142 | 12 | 1263 | 96 | 88 | 98 |
| (PK)_(PK_C) | 2 | 62 | 141 | 63 | 142 | 22 | 2499 | 98 | 93 | 98 |
| (TMEM173) | 1 | 26 | 81 | 27 | 85 | 6 | 1825 | 99 | 80 | 96 |
| (Polyketide_cyc2) | 1 | 20 | 38 | 63 | 110 | 7 | 808 | 66 | 84 | 32 |
| (Polyoma_coat) | 1 | 35 | 84 | 35 | 84 | 16 | 2316 | 100 | 85 | 100 |
| (Prenyltransf) | 1 | 37 | 100 | 37 | 103 | 6 | 1868 | 98 | 96 | 100 |
| (Pribosyltran) | 1 | 55 | 103 | 124 | 214 | 12 | 1523 | 96 | 99 | 44 |
| (Pribosyltran) | 2 | 40 | 67 | 124 | 214 | 10 | 1444 | 97 | 85 | 32 |
| (Pribosyltran) | 3 | 25 | 45 | 124 | 214 | 11 | 810 | 89 | 84 | 20 |
| (Pribosyltran) | 4 | 20 | 36 | 124 | 214 | 14 | 763 | 81 | 72 | 16 |
| (Pro_CA) | 1 | 30 | 71 | 30 | 71 | 9 | 2961 | 92 | 94 | 100 |
| (PTE) | 1 | 24 | 148 | 31 | 163 | 25 | 1496 | 84 | 79 | 77 |
| (Putative_PNPOx) | 1 | 24 | 35 | 25 | 35 | 5 | 1178 | 97 | 100 | 96 |
| (Pyridoxal_deC) | 1 | 44 | 71 | 44 | 71 | 9 | 5652 | 100 | 96 | 100 |
| (Pyrophosphatase) | 1 | 37 | 97 | 41 | 103 | 19 | 704 | 94 | 97 | 90 |
| (Pyrophosphatase) | 2 | 21 | 61 | 41 | 103 | 26 | 285 | 79 | 97 | 51 |
| (Ribonuc_L-PSP) | 1 | 47 | 51 | 51 | 55 | 10 | 999 | 94 | 96 | 92 |
| (S-AdoMet_synt_N)_(S-AdoMet_synt_M)_(S-AdoMet_synt_C) | 1 | 32 | 89 | 33 | 91 | 31 | 2496 | 100 | 97 | 97 |
| (S-AdoMet_synt_N)_(S-AdoMet_synt_M)_(S-AdoMet_synt_C) | 2 | 26 | 79 | 33 | 91 | 13 | 400 | 43 | 75 | 79 |
| (S-AdoMet_synt_N)_(S-AdoMet_synt_M)_(S-AdoMet_synt_C) | 3 | 22 | 74 | 33 | 91 | 13 | 469 | 42 | 74 | 67 |
| (SDF) | 1 | 38 | 66 | 45 | 76 | 10 | 1182 | 98 | 73 | 84 |
| (Seryl_tRNA_N)_(tRNA-synt_2b) | 1 | 22 | 40 | 22 | 40 | 11 | 2505 | 98 | 90 | 100 |
| (SpoU_methylase) | 1 | 27 | 33 | 27 | 33 | 14 | 1463 | 100 | 97 | 100 |
| (SSB) | 1 | 42 | 71 | 42 | 71 | 1 | 1120 | 94 | 93 | 100 |
| (SSB) | 2 | 21 | 38 | 42 | 71 | 7 | 411 | 63 | 68 | 50 |
| (Sulfotransfer_1) | 1 | 26 | 53 | 44 | 81 | 21 | 371 | 11 | 0 | 59 |
| (TauD) | 1 | 21 | 33 | 40 | 92 | 27 | 918 | 76 | 91 | 52 |
| (TauD) | 2 | 20 | 32 | 40 | 92 | 13 | 641 | 78 | 100 | 50 |
| (TetR_N) | 1 | 35 | 121 | 38 | 125 | 7 | 1437 | 98 | 78 | 92 |
| (TetR_N)_(TetR_C_24) | 1 | 32 | 36 | 32 | 36 | 6 | 1400 | 100 | 97 | 100 |
| (TetR_N)_(TetR_C_6) | 1 | 24 | 39 | 24 | 39 | 7 | 1593 | 100 | 97 | 100 |
| (THF_DHG_CYH)_(THF_DHG_CYH_C) | 1 | 20 | 40 | 22 | 43 | 13 | 1529 | 95 | 92 | 91 |
| (Thymidylate_kin) | 1 | 31 | 100 | 37 | 123 | 14 | 945 | 83 | 97 | 84 |
| (TM_helix)_(MS_channel) | 1 | 20 | 25 | 20 | 25 | 10 | 2612 | 100 | 48 | 100 |
| (Transpeptidase) | 1 | 34 | 176 | 90 | 370 | 10 | 997 | 66 | 69 | 38 |
| (tRNA-synt_1b) | 1 | 60 | 135 | 61 | 144 | 8 | 1685 | 90 | 98 | 98 |
| (tRNA-synt_2b)_(HGTP_anticodon)_(ProRS-C_1) | 1 | 29 | 75 | 29 | 75 | 22 | 2320 | 84 | 89 | 100 |
| (zf-C3HC4_3) | 1 | 22 | 27 | 25 | 30 | 22 | 1002 | 85 | 81 | 88 |