Protein Common Interface Database

Clusters with M>=20,SeqId<90 and single Pfam Architecture

Pfam Architecture	Cluster#	#CFs/Cluster	#Entries/Cluster	#CFs/Group	#Entries/Group	Minimum Seq Identity	Surface Area	In PDBBA(%)	In PISABA(%)	CFs Cluster/Group(%)
(C1-set)_(C1-set)	1	70	131	77	148	19	1114	88	86	91
(Peptidase_C14)	1	69	199	75	214	10	924	78	96	92
(Peptidase_C14)	2	25	103	75	214	21	2234	100	100	33
(V-set)_(C1-set)	1	1494	2119	1686	2472	10	1720	100	94	89
(V-set)_(C1-set)	2	201	265	1686	2472	13	376	1	4	12
(V-set)_(C1-set)	3	95	124	1686	2472	12	503	0	6	6
(V-set)_(C1-set)	4	87	163	1686	2472	36	414	0	1	5
(V-set)_(C1-set)	5	73	84	1686	2472	15	216	1	2	4
(V-set)_(C1-set)	6	71	126	1686	2472	17	285	0	5	4
(V-set)_(C1-set)	7	42	49	1686	2472	11	690	4	10	2
(V-set)_(C1-set)	8	39	54	1686	2472	18	384	0	6	2
(V-set)_(C1-set)	9	34	44	1686	2472	15	488	0	20	2
(V-set)_(C1-set)	10	31	34	1686	2472	17	312	0	3	2
(V-set)_(C1-set)	11	30	43	1686	2472	48	365	5	19	2
(V-set)_(C1-set)	12	27	39	1686	2472	15	468	3	3	2
(V-set)_(C1-set)	13	24	31	1686	2472	33	289	16	35	1
(V-set)_(C1-set)	14	24	30	1686	2472	52	876	17	47	1
(V-set)_(C1-set)	15	24	30	1686	2472	13	730	0	3	1
(V-set)_(C1-set)	16	24	28	1686	2472	21	322	0	0	1
(V-set)_(C1-set)	17	22	33	1686	2472	25	324	0	0	1
(V-set)_(C1-set)	18	21	24	1686	2472	18	261	0	0	1
(V-set)_(C1-set)	19	20	21	1686	2472	17	609	0	19	1
(Histone)	1	39	160	42	172	14	600	96	93	93
(Thioredoxin)	1	24	45	119	169	18	566	47	78	20
(Peptidase_M16)_(Peptidase_M16_C)	1	25	62	32	69	12	1806	92	89	78
(2-Hacid_dh_C)	1	57	81	61	93	14	2754	91	99	93
(4HBT)	1	82	143	82	147	10	1305	97	98	100
(4HBT)	2	33	67	82	147	10	538	78	81	40
(4HBT)	3	25	43	82	147	10	284	65	81	30
(Fe-ADH)	1	23	29	23	29	11	1480	83	90	100
(Bromodomain)	1	27	49	156	761	39	741	10	18	17
(BTB)	1	31	47	31	47	16	1728	74	94	100
(GP41)	1	33	61	76	135	10	1110	97	87	43
(GP120)	1	21	61	121	196	68	451	0	2	17
(Ferritin)	1	72	341	80	376	10	1248	99	91	90
(Ferritin)	2	67	334	80	376	10	574	98	87	84
(Ferritin)	3	34	253	80	376	10	491	98	87	42
(Ferritin)	4	34	80	80	376	10	517	100	99	42
(FGGY_N)_(FGGY_C)	1	25	45	33	68	15	1564	73	98	76
(Flavi_glycoprot)_(Flavi_glycop_C)	1	37	41	72	78	29	1140	76	41	51
(Lys)	1	23	496	145	1372	10	563	1	11	16
(Flavin_Reduct)	1	27	39	29	44	12	2765	97	100	93
(Flavodoxin_2)	1	38	87	38	129	10	1967	97	100	100
(FMN_red)	1	32	48	33	49	10	1080	96	94	97
(FMN_red)	2	26	42	33	49	10	1047	88	90	79
(FMN_red)	3	23	38	33	49	10	508	87	84	70
(Hormone_recep)_(ESR1_C)	1	27	182	27	207	83	1604	92	95	100
(Hormone_recep)_(ESR1_C)	2	21	170	27	207	83	440	0	2	78
(PDEase_I)	1	25	92	62	285	24	718	21	10	40
(RVP)	1	81	682	86	921	15	1788	99	97	94
(RVP)	2	30	437	86	921	78	262	0	0	35
(RVP)	3	20	236	86	921	77	225	0	1	23
(Gal-bind_lectin)	1	28	56	76	210	30	647	100	48	37
(GFO_IDH_MocA)_(GFO_IDH_MocA_C)	1	55	78	63	100	10	1641	85	92	87
(GDP_Man_Dehyd)	1	49	104	49	111	10	1188	88	99	100
(V-set)	1	198	298	551	728	10	812	95	87	36
(V-set)	2	51	73	551	728	10	497	10	12	9
(V-set)	3	34	38	551	728	10	396	5	18	6
(Glycolytic)	1	21	52	22	55	41	1254	100	94	95
(Glyoxalase)	1	65	105	77	128	10	2317	95	95	84
(GST_N)_(GST_C_2)	1	42	58	48	65	11	1456	97	97	88
(GST_N)_(GST_C)	1	38	51	39	53	13	1451	86	94	97
(GST_N_3)_(GST_C_2)	1	59	84	90	138	10	1381	94	92	66
(Acyl-CoA_dh_N)_(Acyl-CoA_dh_M)_(Acyl-CoA_dh_1)	1	55	76	56	77	10	1844	92	96	98
(Acyl-CoA_dh_N)_(Acyl-CoA_dh_M)_(Acyl-CoA_dh_1)	2	54	75	56	77	10	2036	91	96	96
(Acyl-CoA_dh_N)_(Acyl-CoA_dh_M)_(Acyl-CoA_dh_1)	3	22	30	56	77	15	252	87	97	39
(His_Phos_1)	1	20	34	50	98	43	867	88	44	40
(HIT)	1	28	67	28	71	10	1822	99	97	100
(Sod_Cu)	1	57	139	81	186	33	679	94	88	70
(HSP20)	1	21	28	40	52	10	1468	96	86	52
(Hydrolase_6)_(Hydrolase_like)	1	21	32	27	41	15	1172	72	97	78
(IMPDH)	1	43	68	44	73	15	2100	99	100	98
(Neur)	1	34	177	39	191	22	1649	98	88	87
(IMS)_(IMS_HHH)_(IMS_C)	1	21	117	46	355	55	297	0	0	46
(Inositol_P)	1	30	53	39	75	15	1412	94	81	77
(AlaDh_PNT_N)_(AlaDh_PNT_C)	1	21	38	24	42	24	1765	97	97	88
(Isochorismatase)	1	21	30	33	45	13	1503	93	97	64
(IspD)	1	21	37	25	42	16	1802	92	92	84
(ketoacyl-synt)_(Ketoacyl-synt_C)	1	37	90	37	90	13	3004	99	98	100
(Collagen)	1	25	44	32	51	19	881	100	95	78
(Ldh_1_N)_(Ldh_1_C)	1	95	215	100	231	10	2178	98	96	95
(Ldh_1_N)_(Ldh_1_C)	2	70	166	100	231	21	1004	96	91	70
(Ldh_1_N)_(Ldh_1_C)	3	59	143	100	231	21	1034	93	90	59
(Lig_chan-Glu_bd)	1	36	200	49	274	18	873	87	56	73
(Lig_chan-Glu_bd)	2	21	137	49	274	88	237	1	0	43
(PNP_UDP_1)	1	47	171	131	397	10	1835	98	98	36
(PNP_UDP_1)	2	36	64	131	397	13	1628	97	98	27
(PNP_UDP_1)	3	35	153	131	397	19	1327	96	97	27
(PNP_UDP_1)	4	35	119	131	397	15	1143	92	97	27
(Transthyretin)	1	34	272	39	337	22	885	100	96	87
(Transthyretin)	2	31	268	39	337	22	400	91	90	79
(Transthyretin)	3	31	278	39	337	22	326	88	87	79
(LysR_substrate)	1	28	44	41	62	10	1386	91	100	68
(MarR)	1	36	47	44	56	10	2563	94	98	82
(MarR_2)	1	27	44	31	48	10	2653	100	98	87
(PemK_toxin)	1	23	31	23	31	15	1059	94	90	100
(Rhv)	1	65	157	84	192	10	1573	99	31	77
(Rhv)	2	63	153	84	192	10	3515	97	30	75
(Rhv)	3	55	143	84	192	10	1330	97	37	65
(Calici_coat)_(Calici_coat_C)	1	38	99	40	106	29	1720	88	89	95
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD)	1	42	91	44	94	30	1689	100	91	95
(NO_synthase)	1	25	487	27	703	41	2512	99	99	93
(MR_MLE_N)_(MR_MLE_C)	1	98	177	131	234	13	1255	85	94	75
(MR_MLE_N)_(MR_MLE_C)	2	88	162	131	234	12	1406	85	89	67
(MR_MLE_N)_(MR_MLE_C)	3	74	132	131	234	12	562	68	86	56
(Catalase)_(Catalase-rel)	1	22	64	22	68	27	2091	95	100	100
(Catalase)_(Catalase-rel)	2	22	64	22	68	27	4378	95	100	100
(Catalase)_(Catalase-rel)	3	21	63	22	68	37	4782	98	100	95
(NDK)	1	58	148	58	154	27	850	93	99	100
(NDK)	2	44	127	58	154	27	708	94	75	76
(CBS)_(CBS)	1	25	25	47	55	10	1272	96	96	53
(DNA_topoisoIV)	1	20	47	20	48	28	1501	98	77	100
(Lectin_C)	1	29	36	121	184	16	1831	92	100	24
(Ribonuc_red_sm)	1	29	83	29	85	13	2447	93	94	100
(Chal_sti_synt_N)_(Chal_sti_synt_C)	1	27	59	27	59	14	2671	98	100	100
(Nitroreductase)	1	70	97	70	97	10	3716	100	100	100
(PALP)	1	72	205	95	238	10	1922	89	95	76
(NTP_transferase)	1	26	62	38	81	15	1482	81	94	68
(Response_reg)	1	26	43	153	245	10	939	60	42	17
(Response_reg)	2	22	44	153	245	13	465	2	0	14
(Response_reg)	3	22	43	153	245	15	548	21	28	14
(NUDIX)	1	29	33	106	217	10	1489	70	97	27
(CN_hydrolase)	1	20	47	24	61	13	2673	98	98	83
(cNMP_binding)_(HTH_Crp_2)	1	60	93	62	98	11	1892	99	97	97
(COesterase)	1	27	137	60	371	26	922	45	81	45
(PfkB)	1	45	73	90	170	10	1386	95	99	50
(PfkB)	2	25	35	90	170	14	1052	97	91	28
(Cu-oxidase_3)_(Cu-oxidase)	1	25	143	25	153	21	1927	97	98	100
(Peptidase_C30)	1	35	114	39	120	37	1259	87	96	90
(HTH_3)	1	41	81	61	104	10	1067	91	81	67
(PK)_(PK_C)	1	40	75	41	78	29	1169	97	91	98
(PK)_(PK_C)	2	40	75	41	78	29	2526	97	99	98
(Y_phosphatase)	1	22	129	104	333	83	334	1	0	21
(polyprenyl_synt)	1	44	133	46	193	10	2529	99	99	96
(Gp_dh_N)_(Gp_dh_C)	1	67	128	67	131	12	1968	95	95	100
(Gp_dh_N)_(Gp_dh_C)	2	64	125	67	131	36	1304	91	96	96
(Gp_dh_N)_(Gp_dh_C)	3	63	124	67	131	38	485	92	94	94
(Prenyltransf)	1	23	62	23	62	11	2059	98	100	100
(Phycobilisome)	1	20	42	22	59	18	1513	100	98	91
(Pribosyltran)	1	46	73	98	147	17	1467	95	100	47
(Pribosyltran)	2	23	32	98	147	10	1564	97	100	23
(Pribosyltran)	3	20	30	98	147	31	809	93	83	20
(Pyr_redox_2)	1	36	51	51	93	14	2080	92	98	71
(Pyridoxal_deC)	1	27	39	27	39	11	5698	100	100	100
(Pyrophosphatase)	1	28	63	33	86	30	705	90	100	85
(Pyrophosphatase)	2	25	57	33	86	30	652	89	96	76
(RuBisCO_large_N)_(RuBisCO_large)	1	31	84	31	84	17	4230	99	94	100
(Ribonuc_L-PSP)	1	39	43	42	46	12	999	93	98	93
(Hemagglutinin)	1	106	326	140	379	10	637	95	94	76
(Hemagglutinin)	2	96	300	140	379	10	2737	100	94	69
(Insulin)	1	27	290	40	340	10	678	99	76	68
(Cpn60_TCP1)	1	61	86	78	112	10	1477	100	64	78
(Cpn60_TCP1)	2	28	37	78	112	11	582	95	30	36
(CutA1)	1	22	30	22	30	22	1107	90	100	100
(SHMT)	1	25	76	26	77	28	3920	96	99	96
(SnoaL_2)	1	24	24	69	127	10	1155	100	100	35
(SnoaL_2)	2	22	72	69	127	12	1044	97	93	32
(Cupin_2)	1	42	46	52	60	10	1569	98	98	81
(Sod_Fe_N)_(Sod_Fe_C)	1	60	134	63	138	19	886	95	96	95
(Cys_Met_Meta_PP)	1	33	75	33	78	25	2407	99	100	100
(Cys_Met_Meta_PP)	2	32	71	33	78	25	1568	93	99	97
(Cys_Met_Meta_PP)	3	29	71	33	78	25	840	94	99	88
(TetR_N)_(TetR_C)	1	26	59	26	61	20	2554	98	97	100
(TPP_enzyme_N)_(TPP_enzyme_M)_(TPP_enzyme_C)	1	51	153	51	156	13	3447	100	100	100
(TPP_enzyme_N)_(TPP_enzyme_M)_(TPP_enzyme_C)	2	28	103	51	156	13	1420	99	99	55
(TPP_enzyme_N)_(TPP_enzyme_M)_(TPP_enzyme_C)	3	25	99	51	156	17	623	99	99	49
(Transpeptidase)	1	25	64	57	147	21	1034	88	61	44
(tRNA-synt_1b)	1	47	99	48	100	10	1713	89	100	98
(TIM)	1	73	168	86	203	16	1580	98	100	85
(UDPG_MGDP_dh_N)_(UDPG_MGDP_dh)_(UDPG_MGDP_dh_C)	1	20	28	21	29	15	2960	100	96	95
(Neur_chan_LBD)	1	49	118	56	136	14	1310	100	97	88
(DegT_DnrJ_EryC1)	1	28	54	28	56	14	2413	93	100	100
(GST_N)_(GST_C_3)	1	79	242	82	279	13	1320	98	95	96
(DHDPS)	1	80	166	83	186	19	1410	98	98	96
(DHDPS)	2	55	122	83	186	19	921	96	85	66
(Putative_PNPOx)	1	21	32	23	33	10	1181	97	97	91
(Thymidylat_synt)	1	48	212	48	214	13	2180	93	97	100
(MHC_I)_(Ig_3)	1	46	81	233	470	39	660	2	6	20
(MHC_I)_(Ig_3)	2	34	89	233	470	72	506	0	0	15
(MHC_I)_(Ig_3)	3	30	82	233	470	83	503	0	0	13
(MHC_I)_(Ig_3)	4	27	84	233	470	41	292	1	0	12
(MHC_I)_(Ig_3)	5	25	79	233	470	69	366	0	0	11
(DJ-1_PfpI)	1	24	62	53	105	17	1352	92	98	45
(RNase_PH)_(RNase_PH_C)	1	24	40	25	41	10	1612	100	95	96
(DNA_pol3_beta)_(DNA_pol3_beta_2)_(DNA_pol3_beta_3)	1	32	63	32	66	14	1226	98	89	100
(MIP)	1	22	42	31	51	18	1704	100	98	71
(dUTPase)	1	36	94	40	101	15	1642	99	100	90
(ECH_1)	1	113	161	129	182	10	1484	96	96	88
(ECH_1)	2	26	32	129	182	19	494	69	81	20
(Enolase_N)_(Enolase_C)	1	34	71	34	72	43	1823	94	97	100
(Enolase_N)_(MR_MLE_C)	1	30	47	30	50	17	887	64	100	100
(Enolase_N)_(MR_MLE_C)	2	30	47	30	50	17	1307	66	100	100
(Enolase_N)_(MR_MLE_C)	3	30	47	30	50	17	2349	96	100	100
(Spermine_synt_N)_(Spermine_synth)	1	20	45	20	45	14	1682	100	98	100
(IL8)	1	31	55	63	112	10	759	82	71	49
(IL8)	2	25	50	63	112	10	823	84	50	40
(Phage_lysozyme)	1	21	520	67	750	66	744	0	4	31
(DPPIV_N)_(Peptidase_S9)	1	27	121	40	161	18	2166	95	98	68
(Serpin)	1	29	40	133	187	10	2256	95	98	22
(Trypsin)	1	23	55	499	2137	10	2816	98	98	5
(P-II)	1	48	72	48	74	11	1114	100	97	100
(Proteasome)	1	65	341	68	403	10	685	99	80	96
(Proteasome)	2	54	330	68	403	10	717	99	81	79
(Proteasome)	3	54	329	68	403	10	961	98	79	79
(Proteasome_A_N)_(Proteasome)	1	47	299	47	353	10	1344	100	80	100
(PCNA_N)_(PCNA_C)	1	54	70	62	79	12	652	83	66	87
(OMPdecase)	1	55	225	56	229	13	1726	95	100	98
(OsmC)	1	21	25	23	27	10	3113	100	100	91
(Globin)	1	96	366	201	1139	11	720	99	96	48
(Globin)	2	64	290	201	1139	32	283	96	80	32
(ABM)	1	29	41	39	53	10	1362	88	98	74
(Carboxyl_trans)	1	24	38	24	38	15	4548	97	95	100
(Iso_dh)	1	73	168	73	168	10	2722	98	98	100
(PGI)	1	21	51	21	51	14	6138	98	100	100
(Acetyltransf_3)	1	27	41	44	61	11	1005	78	71	61
(Acetyltransf_4)	1	21	27	21	27	10	1424	89	93	100
(ACP_syn_III)_(ACP_syn_III_C)	1	41	76	41	77	14	2726	95	99	100
(ACPS)	1	20	29	26	37	13	763	86	86	77
(Actin)	1	29	29	124	187	51	593	100	10	23
(TGF_beta)	1	59	76	64	81	10	1281	95	87	92
(AIRS)_(AIRS_C)	1	26	40	27	41	10	2382	88	100	96
(Tubulin)_(Tubulin_C)	1	70	131	82	148	10	1382	95	60	85
(Adeno_knob)	1	20	37	21	41	16	1026	92	92	95
(ADH_N)_(ADH_zinc_N)	2	39	59	91	198	11	514	76	76	43
(ADH_N)_(ADH_zinc_N)	3	34	48	91	198	14	620	83	83	37
(adh_short_C2)	1	371	719	383	811	10	1205	95	97	97
(adh_short_C2)	2	361	720	383	811	10	1481	93	96	94
(adh_short)	1	82	154	90	178	10	2210	93	97	91
(adh_short)	2	20	22	90	178	15	1208	91	95	22
(Pkinase)	1	25	97	612	3022	26	516	1	0	4
(Sulfotransfer_1)	1	24	50	37	70	21	371	12	0	65
(TetR_N)_(TetR_C_6)	1	31	37	31	37	10	1707	97	92	100
(Redoxin)	1	32	45	43	57	10	748	69	89	74
(AhpC-TSA)_(1-cysPrx_C)	1	46	87	46	92	20	1769	98	97	100
(AhpC-TSA)_(1-cysPrx_C)	2	35	73	46	92	25	684	95	82	76
(tRNA_anti-codon)_(tRNA-synt_2)	1	26	41	26	41	11	4177	98	98	100
(Ala_racemase_N)_(Ala_racemase_C)	1	29	54	31	56	22	2889	98	94	94
(Aldedh)	1	120	285	123	310	12	2893	99	99	98
(Aldedh)	2	74	192	123	310	11	1143	90	92	60
(Aldedh)	3	69	185	123	310	25	956	90	92	56
(DMRL_synthase)	1	21	48	21	48	12	813	92	90	100
(bZIP_2)	1	32	86	38	100	10	763	93	85	84
(Lectin_legB)	1	75	231	106	310	27	949	94	77	71
(14-3-3)	1	49	113	50	114	16	1003	88	91	98
(Lectin_legB)	2	26	63	106	310	10	981	90	89	25
(Lectin_legB)	3	26	43	106	310	49	878	98	77	25
(Lectin_legB)	4	20	68	106	310	32	862	88	65	19
(Amidohydro_1)	1	22	39	79	142	10	2568	64	100	28
(Amidohydro_1)	2	21	29	79	142	18	1342	79	93	27
(OTCace_N)_(OTCace)	1	54	140	56	144	14	1119	96	100	96
(Aminotran_1_2)	1	136	302	162	367	10	3074	98	99	84
(Aminotran_3)	1	82	198	82	221	12	4651	95	98	100
(C1q)	1	21	28	22	30	10	968	96	93	95
(NGF)	1	20	22	20	22	43	1447	100	95	100
(Citrate_synt)	1	26	49	26	49	18	4744	100	94	100
(Porin_1)	1	25	52	25	53	14	1470	100	96	100
(Aminotran_3)	2	21	48	82	221	20	1126	75	79	26
(MIF)	1	28	95	28	99	15	1105	99	99	100
(DAHP_synth_1)	1	27	119	28	148	10	1939	97	99	96
(DAHP_synth_1)	2	21	84	28	148	21	1384	92	95	75
(Dala_Dala_lig_N)_(Dala_Dala_lig_C)	1	25	44	25	44	19	1433	89	95	100
(DXP_reductoisom)_(DXP_redisom_C)_(DXPR_C)	1	20	66	20	67	27	1737	100	100	100
(Phos_pyr_kin)	1	22	43	22	44	14	1867	84	98	100
(Pro_CA)	1	22	51	22	51	10	2976	96	94	100
(PTE)	1	20	97	27	106	25	1528	78	100	74
(Thiolase_N)_(Thiolase_C)	1	37	81	41	87	13	2590	100	99	90
(Thiolase_N)_(Thiolase_C)	2	21	54	41	87	41	298	89	91	51
(Thiolase_N)_(Thiolase_C)	3	21	54	41	87	41	611	89	91	51
(Semialdhyde_dh)_(Semialdhyde_dhC)	1	36	70	36	70	10	2562	89	97	100
(SSB)	1	31	46	32	48	10	1099	91	96	97
(Thymidylate_kin)	1	24	70	31	90	17	920	77	100	77
(TP_methylase)	1	27	109	28	110	10	2378	96	96	96
(Aminotran_4)	1	39	83	43	99	12	2344	98	100	91
(Aminotran_5)	1	67	114	69	117	10	2850	96	100	97
(Hormone_recep)	1	122	330	297	966	11	1120	62	48	41
(GFP)	1	79	157	207	545	16	1257	68	83	38
(GFP)	2	76	156	207	545	16	861	56	60	37
(GFP)	3	44	71	207	545	77	786	23	30	21
(S_100)_(EF-hand_1)	1	63	155	69	165	10	1460	100	63	91
(EF-hand_7)_(EF-hand_7)	1	24	34	126	186	16	509	3	12	19
(LSM)	1	41	49	44	52	10	826	98	76	93
(ELFV_dehydrog_N)_(ELFV_dehydrog)	1	32	53	32	53	13	1326	94	83	100
(ELFV_dehydrog_N)_(ELFV_dehydrog)	2	29	46	32	53	16	1343	100	80	91
(ELFV_dehydrog_N)_(ELFV_dehydrog)	3	26	43	32	53	15	421	100	79	81
(Asparaginase)	1	27	49	29	55	22	2140	100	100	93
(ATP-synt_C)	1	30	53	31	53	10	1318	100	72	97
(Avidin)	1	52	230	56	265	20	1630	97	98	93
(Avidin)	2	44	218	56	265	23	508	95	94	79
(Pkinase_Tyr)	1	29	88	439	1316	19	1246	39	43	7
(PDGF)	1	40	43	42	45	24	1302	98	95	95
(Bac_luciferase)	1	22	26	26	30	10	2276	88	100	85
(TNF)	1	58	74	66	89	10	1015	86	92	88
(Pyr_redox_2)_(Pyr_redox_dim)	1	78	159	79	163	12	3399	96	100	99
(BMC)	1	29	45	30	47	10	1039	100	98	97