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PDBfam
Domain Clusters with M>=20,SeqId<90 and diff Pfam relation
Pfam Architecture
Cluster#
#CFs/Cluster
#Entries/Cluster
#CFs/Group
#Entries/Group
Minimum Seq Identity
Surface Area
In PDBBA(%)
In PISABA(%)
CFs Cluster/Group(%)
(BBE);(FAD_binding_4)
1
29
60
29
65
1
775
100
87
100
(DXP_redisom_C);(DXPR_C)
1
22
70
22
72
1
1571
100
100
100
(DXP_redisom_C);(DXP_reductoisom)
1
22
70
22
72
1
587
100
100
100
(DXP_reductoisom);(DXPR_C)
1
22
70
22
72
1
924
100
100
100
(Glycos_trans_3N);(Glycos_transf_3)
1
27
82
28
83
1
262
85
94
96
(Photo_RC);(PRC)
1
21
124
23
131
1
167
97
91
91
(Photo_RC);(PRC)
2
21
124
23
131
1
212
98
95
91
(Photo_RC);(PRCH)
1
21
124
23
131
1
438
97
91
91
(Photo_RC);(PRCH)
2
21
124
23
131
1
1576
100
97
91
(1-cysPrx_C);(AhpC-TSA)
1
62
104
62
104
1
256
100
98
100
(2Fe-2S_thioredx);(Complex1_51K)
1
20
23
22
25
1
1244
100
65
91
(2Fe-2S_thioredx);(NADH_4Fe-4S)
1
21
24
21
24
1
306
100
62
100
(2OG-FeII_Oxy);(DIOX_N)
1
24
91
24
92
1
1829
100
100
100
(3HCDH);(3HCDH_N)
1
25
55
26
57
1
406
98
98
96
(3HCDH);(3HCDH_N)
2
24
54
26
57
1
430
100
98
92
(40S_SA_C);(Ribosomal_S17e)
1
68
68
101
108
1
183
100
18
67
(7tm_1);(Phage_lysozyme)
1
28
36
48
70
1
1137
100
100
58
(A2M);(A2M_recep)
1
25
29
38
46
1
211
97
97
66
(AAA);(AAA_2)
1
21
22
23
24
1
258
91
23
91
(AAA);(Prot_ATP_ID_OB)
1
30
30
53
53
1
180
100
27
57
(AAA_2);(ClpB_D2-small)
1
43
64
51
72
1
335
73
44
84
(AAA_2);(ClpB_D2-small)
2
36
47
51
72
1
259
100
60
71
(ABC_membrane);(ABC_tran)
1
66
96
68
98
1
723
97
73
97
(ABC_membrane);(ABC_tran)
2
51
80
68
98
1
128
100
82
75
(ABC_tran);(BCA_ABC_TP_C)
1
20
22
21
23
1
229
100
100
95
(ACP_syn_III);(ACP_syn_III_C)
1
51
102
54
106
1
1264
100
99
94
(ADH_N);(ADH_N_assoc)
1
21
30
21
30
1
893
100
100
100
(ADH_N);(ADH_zinc_N)
1
119
244
121
246
1
616
100
99
98
(ADH_N);(ADH_zinc_N)
2
93
215
121
246
1
297
94
96
77
(ADH_N);(ADH_zinc_N)
3
50
77
121
246
1
167
84
86
41
(ADH_N);(ADH_zinc_N_2)
1
27
32
27
32
1
950
100
100
100
(ADH_N_2);(ADH_zinc_N)
1
24
43
25
44
1
337
100
100
96
(ADK);(ADK_lid)
1
34
65
35
67
1
537
100
100
97
(AIRS);(AIRS_C)
1
29
53
32
58
1
1163
100
100
91
(AMP-binding);(AMP-binding_C)
1
91
156
95
160
1
636
100
99
96
(ANAPC4_WD40);(WD40)
1
31
50
33
52
1
362
100
92
94
(ANF_receptor);(Lig_chan-Glu_bd)
1
26
27
68
78
1
292
96
7
38
(ANF_receptor);(Lig_chan-Glu_bd)
2
23
28
68
78
1
273
100
54
34
(ANF_receptor);(Lig_chan-Glu_bd)
3
22
22
68
78
1
196
100
0
32
(AP_endonuc_2);(AP_endonuc_2_N)
1
25
46
25
48
1
1687
100
100
100
(ATP-gua_Ptrans);(ATP-gua_PtransN)
1
27
47
27
47
25
926
100
98
100
(ATP-synt);(ATP-synt_DE_N)
1
46
56
46
56
1
771
100
68
100
(ATP-synt);(ATP-synt_Eps)
1
29
37
29
37
1
767
100
84
100
(ATP-synt);(ATP-synt_ab)
1
45
60
56
72
1
250
100
77
80
(ATP-synt);(ATP-synt_ab_C)
1
42
58
49
65
1
286
100
79
86
(ATP-synt_A);(ATP-synt_C)
1
21
21
27
27
1
416
100
10
78
(ATP-synt_C);(ATP-synt_DE_N)
1
21
21
30
30
1
194
95
5
70
(ATP-synt_D);(ATP-synt_F)
1
23
26
24
29
1
1203
96
35
96
(ATP-synt_DE);(ATP-synt_Eps)
1
26
33
26
34
1
436
100
82
100
(ATP-synt_DE_N);(ATP-synt_Eps)
1
21
29
28
36
1
339
100
79
75
(ATP-synt_ab);(ATP-synt_ab_C)
1
29
43
50
70
1
163
100
81
58
(ATP-synt_ab);(ATP-synt_ab_C)
2
21
33
50
70
1
968
100
100
42
(ATP-synt_ab);(ATP-synt_ab_N)
1
42
61
81
120
1
384
97
80
52
(ATP-synt_ab);(ATP-synt_ab_N)
2
34
41
81
120
1
121
93
80
42
(Actin);(Gelsolin)
1
22
36
22
37
1
821
100
100
100
(Acyl-CoA_dh_1);(Acyl-CoA_dh_M)
1
77
105
79
109
1
505
92
99
97
(Acyl-CoA_dh_1);(Acyl-CoA_dh_M)
2
76
102
79
109
1
528
100
100
96
(Acyl-CoA_dh_1);(Acyl-CoA_dh_N)
1
64
89
66
92
1
1140
100
100
97
(Acyl-CoA_dh_M);(Acyl-CoA_dh_N)
1
75
108
77
114
1
880
100
100
97
(AdoHcyase);(AdoHcyase_NAD)
1
38
59
38
60
1
741
100
100
100
(AdoHcyase);(AdoHcyase_NAD)
2
37
59
38
60
1
460
90
97
97
(AdoHcyase);(AdoHcyase_NAD)
3
31
49
38
60
1
692
96
100
82
(Ala_racemase_C);(Ala_racemase_N)
1
38
65
38
65
1
773
100
100
100
(Ala_racemase_C);(Ala_racemase_N)
2
37
64
38
65
1
900
100
97
97
(Ald_Xan_dh_C);(Ald_Xan_dh_C2)
1
20
70
21
71
1
2138
100
100
95
(Ald_Xan_dh_C);(Fer2)
1
21
62
21
71
1
303
100
100
100
(Ald_Xan_dh_C);(Fer2_2)
1
21
62
21
71
1
255
100
100
100
(Ald_Xan_dh_C2);(Fer2)
1
21
62
21
62
1
287
100
100
100
(Ald_Xan_dh_C2);(Fer2_2)
1
21
62
21
71
1
1017
100
100
100
(Alpha-amylase);(Alpha-amylase_C)
1
36
149
44
170
1
814
100
100
82
(Alpha-amylase);(CBM_48)
1
31
90
32
94
1
886
99
99
97
(Alpha-amylase);(Malt_amylase_C)
1
44
132
45
138
1
889
100
100
98
(Amidohydro_1);(Urease_alpha)
1
23
61
24
82
1
1231
100
100
96
(Amino_oxidase);(SWIRM)
1
22
64
25
67
1
725
100
100
88
(Ank);(Ank_2)
1
116
136
133
159
1
665
95
84
87
(Ank);(Ank_2)
2
27
29
133
159
1
225
10
24
20
(Ank_2);(Ank_4)
1
28
30
37
44
1
662
100
57
76
(Ank_2);(Ank_5)
1
26
30
32
36
1
900
97
87
81
(Anoct_dimer);(Anoctamin)
1
23
24
23
24
1
2020
100
83
100
(ApbA);(ApbA_C)
1
20
22
20
22
1
859
100
100
100
(Arm);(Arm_3)
1
47
110
53
116
1
776
100
98
89
(Arm);(IBB)
1
39
100
56
121
1
513
100
98
70
(Arm);(IBB)
2
28
89
56
121
1
214
0
0
50
(Arm);(IBB)
3
22
79
56
121
1
218
0
0
39
(BCAS2);(Prp19)
1
22
22
24
24
1
626
100
14
92
(BCAS2);(Prp19)
2
20
20
24
24
1
383
100
10
83
(Bcl-2);(BH4)
1
62
85
69
93
1
875
88
91
90
(Bcl-2);(BH4)
2
20
26
69
93
1
191
4
12
29
(Bcl-2);(Bclx_interact)
1
29
39
31
41
1
944
95
95
94
(Biotin_carb_C);(Biotin_carb_N)
1
37
76
38
79
1
550
100
100
97
(Biotin_carb_C);(Biotin_carb_N)
2
28
63
38
79
1
364
70
46
74
(Biotin_carb_C);(CPSase_L_D2)
1
37
76
38
79
1
1145
100
100
97
(Biotin_carb_C);(CPSase_L_D2)
2
24
57
38
79
22
196
67
39
63
(Biotin_carb_N);(CPSase_L_D2)
1
40
88
41
91
1
1003
100
98
98
(Bromodomain);(DUF902)
1
26
83
26
83
1
201
98
96
100
(C1-set);(DUF1968)
1
198
342
206
378
1
1210
96
97
96
(C1-set);(MHC_I)
1
405
726
454
922
1
708
97
96
89
(C1-set);(MHC_I)
2
170
297
454
922
1
174
94
94
37
(C1-set);(MHC_I)
3
79
146
454
922
1
273
0
5
17
(C1-set);(MHC_I)
5
36
102
454
922
1
513
0
0
8
(C1-set);(MHC_I)
10
29
90
454
922
1
344
0
0
6
(C1-set);(MHC_I)
9
30
64
454
922
1
134
0
3
7
(C1-set);(MHC_I)
4
39
53
454
922
1
383
96
96
9
(C1-set);(MHC_I)
6
34
133
454
922
1
203
1
0
7
(C1-set);(MHC_I)
7
34
139
454
922
1
184
0
0
7
(C1-set);(MHC_I)
8
32
47
454
922
1
375
94
94
7
(C1-set);(MHC_I)
12
25
62
454
922
1
250
0
0
6
(C1-set);(MHC_I)
11
29
136
454
922
1
113
0
0
6
(C1-set);(MHC_I)
15
24
45
454
922
1
323
0
9
5
(C1-set);(MHC_I)
14
24
47
454
922
1
331
0
0
5
(C1-set);(MHC_I)
13
25
35
454
922
1
277
0
0
6
(C1-set);(MHC_I)
17
21
62
454
922
1
263
0
0
5
(C1-set);(MHC_I)
16
22
51
454
922
1
253
0
0
5
(C1-set);(MHC_II_alpha)
1
129
177
131
182
1
303
98
98
98
(C1-set);(MHC_II_alpha)
2
96
125
131
182
1
506
98
97
73
(C1-set);(MHC_II_beta)
1
129
177
131
182
1
238
98
98
98
(C1-set);(MHC_I_3)
1
39
108
42
138
1
589
98
99
93
(C1-set);(MHC_I_3)
2
22
39
42
138
1
212
97
97
52
(C1-set);(V-set)
1
1544
2080
2155
3052
1
179
98
97
72
(C1-set);(V-set)
2
1362
1809
2155
3052
1
260
99
97
63
(C1-set);(V-set)
3
86
111
2155
3052
1
160
0
1
4
(C1-set);(V-set)
4
67
80
2155
3052
1
140
0
4
3
(C1-set);(V-set)
5
37
60
2155
3052
1
177
0
0
2
(C1-set);(V-set)
8
36
48
2155
3052
1
314
12
50
2
(C1-set);(V-set)
6
37
51
2155
3052
1
194
0
0
2
(C1-set);(V-set)
7
37
52
2155
3052
1
140
4
13
2
(C1-set);(V-set)
9
36
41
2155
3052
1
174
0
0
2
(C1-set);(V-set)
26
21
68
2155
3052
1
235
3
4
1
(C1-set);(V-set)
10
34
37
2155
3052
1
162
0
0
2
(C1-set);(V-set)
18
25
38
2155
3052
1
288
0
0
1
(C1-set);(V-set)
11
32
43
2155
3052
1
165
0
5
1
(C1-set);(V-set)
13
30
37
2155
3052
1
141
3
11
1
(C1-set);(V-set)
12
32
36
2155
3052
1
150
14
11
1
(C1-set);(V-set)
14
28
32
2155
3052
1
257
0
6
1
(C1-set);(V-set)
15
27
30
2155
3052
1
146
0
0
1
(C1-set);(V-set)
16
26
29
2155
3052
1
143
0
0
1
(C1-set);(V-set)
21
23
33
2155
3052
1
172
0
0
1
(C1-set);(V-set)
19
25
30
2155
3052
1
227
0
3
1
(C1-set);(V-set)
22
23
31
2155
3052
1
132
0
0
1
(C1-set);(V-set)
23
23
31
2155
3052
1
191
0
0
1
(C1-set);(V-set)
17
26
30
2155
3052
1
213
0
7
1
(C1-set);(V-set)
27
21
32
2155
3052
1
125
3
0
1
(C1-set);(V-set)
25
22
26
2155
3052
1
376
0
4
1
(C1-set);(V-set)
28
21
25
2155
3052
1
148
0
0
1
(C1-set);(V-set)
29
21
27
2155
3052
1
159
0
0
1
(C1-set);(V-set)
20
24
24
2155
3052
1
158
0
12
1
(C1-set);(V-set)
35
20
27
2155
3052
1
171
0
7
1
(C1-set);(V-set)
30
21
25
2155
3052
1
185
4
8
1
(C1-set);(V-set)
24
23
29
2155
3052
1
158
3
0
1
(C1-set);(V-set)
31
21
27
2155
3052
1
159
0
0
1
(C1-set);(V-set)
32
21
25
2155
3052
1
190
0
4
1
(C1-set);(V-set)
33
21
21
2155
3052
1
176
0
0
1
(C1-set);(V-set)
34
21
21
2155
3052
1
154
0
0
1
(C1-set);(V-set)
37
20
23
2155
3052
1
202
0
4
1
(C1-set);(V-set)
38
20
21
2155
3052
1
139
0
0
1
(C1-set);(V-set)
39
20
20
2155
3052
1
144
5
5
1
(C1-set);(V-set)
36
20
25
2155
3052
1
183
0
0
1
(C1-set);(V-set_2)
1
45
54
57
82
1
164
96
93
79
(C2-set);(ig)
1
30
45
30
45
1
560
96
78
100
(C2-set_2);(V-set)
1
30
33
43
49
1
228
100
97
70
(CDC48_2);(CDC48_N)
1
42
46
44
48
1
609
93
78
95
(COX1);(COX2)
1
29
114
29
114
1
1281
97
88
100
(COX1);(COX2_TM)
1
25
78
25
78
1
2073
100
82
100
(COX1);(COX3)
1
23
66
23
66
1
2133
100
80
100
(CPSF_A);(MMS1_N)
1
33
42
39
50
1
1205
100
93
85
(CRPV_capsid);(Rhv)
1
21
21
24
25
1
1037
67
24
88
(CSN8_PSD8_EIF3K);(PCI)
1
58
58
58
58
1
1047
97
28
100
(Cadherin);(Cadherin_2)
1
23
23
23
23
1
156
100
100
100
(Calici_coat);(CRPV_capsid)
1
20
20
20
20
1
2534
70
20
100
(Calici_coat);(Calici_coat_C)
1
51
133
52
137
1
230
91
92
98
(Calici_coat);(Calici_coat_C)
2
49
130
52
137
1
3642
100
99
94
(Calici_coat);(Rhv)
1
20
20
39
59
1
1065
70
20
51
(Catalase);(Catalase-rel)
1
35
127
35
127
1
1326
99
99
100
(Cation_ATPase_C);(E1-E2_ATPase)
1
34
81
36
85
1
766
100
98
94
(Cation_ATPase_N);(E1-E2_ATPase)
1
35
82
38
108
1
1807
100
96
92
(Chal_sti_synt_C);(Chal_sti_synt_N)
1
43
83
43
83
1
878
99
100
100
(Chal_sti_synt_C);(Chal_sti_synt_N)
2
43
83
43
83
1
2108
100
100
100
(Complex1_30kDa);(Complex1_49kDa)
1
25
28
25
28
1
1371
100
50
100
(Complex1_30kDa);(Oxidored_q6)
1
24
27
25
28
1
403
100
52
96
(Complex1_49kDa);(Fer4_7)
1
25
28
25
28
1
428
100
50
100
(Complex1_49kDa);(NADH-G_4Fe-4S_3)
1
20
23
20
23
1
751
100
57
100
(Complex1_49kDa);(NADHdh)
1
21
21
21
21
1
871
100
38
100
(Complex1_49kDa);(Oxidored_q6)
1
25
28
25
28
1
523
100
50
100
(Corona_S2);(Spike_rec_bind)
1
34
34
34
34
1
429
100
12
100
(Cu-oxidase);(Cu-oxidase_2)
1
59
197
60
204
1
868
100
99
98
(Cu-oxidase);(Cu-oxidase_3)
1
86
356
89
368
1
1334
100
99
97
(Cu-oxidase);(Cu-oxidase_3)
2
29
156
89
368
1
776
97
97
33
(Cu-oxidase_2);(Cu-oxidase_3)
1
76
258
79
261
1
991
99
99
96
(Cu-oxidase_2);(Cu-oxidase_3)
2
23
61
79
261
1
1000
97
93
29
(Cu_amine_oxid);(Cu_amine_oxidN2)
1
22
138
22
142
1
1124
99
100
100
(Cwf_Cwc_15);(PROCN)
1
26
26
28
28
1
1006
100
15
93
(Cwf_Cwc_15);(SKIP_SNW)
1
25
25
26
26
1
279
100
8
96
(Cwf_Cwc_15);(WD40)
1
28
28
28
28
1
286
100
11
100
(Cwf_Cwc_15);(WD40)
2
26
26
28
28
1
386
100
8
93
(Cwf_Cwc_15);(WD40)
3
20
20
28
28
1
181
100
5
71
(Cyclin_C);(Cyclin_N)
1
29
96
41
176
1
1304
100
100
71
(Cyclin_N);(Pkinase)
1
41
165
47
187
1
1225
99
99
87
(Cyclin_N);(Pkinase)
2
20
106
47
187
1
458
4
8
43
(Cytochrom_B_C);(Rieske)
1
35
57
39
73
1
499
82
79
90
(Cytochrom_B_C);(UCR_14kD)
1
30
62
30
64
1
387
100
84
100
(Cytochrom_B_C);(UcrQ)
1
30
62
30
63
1
662
100
84
100
(Cytochrom_C1);(Cytochrome_B)
1
30
66
34
71
1
536
100
91
88
(Cytochrom_C1);(UCR_14kD)
1
26
58
27
60
1
136
100
90
96
(Cytochrom_C1);(UCR_TM)
1
30
52
30
61
1
519
100
81
100
(Cytochrom_C1);(UCR_UQCRX_QCR9)
1
27
59
30
63
1
843
100
88
90
(Cytochrom_C1);(UCR_hinge)
1
30
62
30
63
1
755
100
84
100
(Cytochrom_C1);(UcrQ)
1
30
62
30
64
1
364
100
84
100
(Cytochrome_B);(Rieske)
1
27
43
34
68
1
290
84
84
79
(Cytochrome_B);(UCR_14kD)
1
27
59
30
64
1
185
100
88
90
(Cytochrome_B);(UCR_TM)
1
28
50
30
64
1
213
82
76
93
(Cytochrome_B);(UCR_TM)
2
27
49
30
64
1
484
100
86
90
(Cytochrome_B);(UcrQ)
1
26
58
30
63
1
161
100
90
87
(DEAD);(Helicase_C)
1
70
111
127
187
1
463
99
95
55
(DNA_RNApol_7kD);(RNA_pol_A_bac)
1
113
211
119
218
1
538
100
59
95
(DNA_RNApol_7kD);(RNA_pol_Rpb2_1)
1
117
214
117
214
1
245
100
60
100
(DNA_RNApol_7kD);(RNA_pol_Rpb2_6)
1
119
218
119
218
1
792
100
59
100
(DNA_gyraseB);(HATPase_c)
1
24
27
26
36
1
474
100
93
92
(DNA_gyraseB_C);(DNA_topoisoIV)
1
22
59
23
61
1
321
95
76
96
(DNA_gyraseB_C);(DNA_topoisoIV)
2
21
55
23
61
1
224
95
73
91
(DNA_photolyase);(FAD_binding_7)
1
28
54
28
54
1
1341
100
100
100
(DNA_pol3_beta);(DNA_pol3_beta_2)
1
42
80
44
82
1
624
100
100
95
(DNA_pol3_beta);(DNA_pol3_beta_3)
1
47
85
48
86
1
600
93
88
98
(DNA_pol3_beta_2);(DNA_pol3_beta_3)
1
42
80
43
81
1
671
100
100
98
(DNA_pol_A);(DNA_pol_A_exo1)
1
21
138
22
141
1
626
100
96
95
(DNA_pol_B);(DNA_pol_B_exo1)
1
42
190
42
190
1
1075
100
99
100
(DNA_pol_B_palm);(DNA_pol_B_thumb)
1
57
526
57
531
1
513
100
100
100
(DNA_pol_B_palm);(DNA_pol_lambd_f)
1
47
507
47
512
1
399
100
100
100
(DNA_pol_lambd_f);(HHH_8)
1
33
448
38
487
1
209
100
100
87
(DNA_topoisoIV);(Toprim)
1
28
68
31
81
1
317
96
78
90
(DPPIV_N);(Peptidase_S9)
1
37
154
40
157
1
1640
100
100
92
(DPPIV_N);(Peptidase_S9)
2
30
141
40
157
1
344
82
95
75
(DSS1_SEM1);(PCI)
1
55
55
62
62
1
783
98
25
89
(DSS1_SEM1);(PCI)
2
39
39
62
62
1
261
97
15
63
(DSS1_SEM1);(RPN7)
1
32
32
37
37
1
183
100
6
86
(DUF1205);(Glyco_tran_28_C)
1
21
28
21
28
1
3037
96
96
100
(DUF1205);(Glyco_transf_28)
1
23
30
23
31
1
788
100
100
100
(DUF1968);(V-set)
1
99
170
184
350
1
157
96
96
54
(DUF1968);(V-set)
2
21
26
184
350
1
168
0
23
11
(DUF3439);(LRR_8)
1
38
44
45
53
1
666
100
93
84
(DUF5110);(Glyco_hydro_31)
1
29
83
29
83
1
1157
100
100
100
(Dala_Dala_lig_C);(Dala_Dala_lig_N)
1
28
45
28
48
1
942
100
100
100
(DapB_C);(DapB_N)
1
23
35
23
35
1
1223
100
100
100
(Dimerisation);(Methyltransf_2)
1
24
47
24
47
1
842
91
100
100
(Dimerisation2);(Methyltransf_2)
1
20
35
20
35
1
1123
86
94
100
(Dynamin_M);(Dynamin_N)
1
26
33
26
33
1
1523
100
91
100
(EF-hand_1);(EF-hand_6)
1
20
23
23
32
1
622
100
96
87
(EF-hand_1);(EF-hand_7)
1
25
31
65
82
1
428
84
81
38
(EF-hand_1);(IQ)
1
22
26
45
55
1
724
88
81
49
(EF-hand_1);(S_100)
1
69
163
79
179
1
749
84
71
87
(EF-hand_1);(S_100)
2
66
154
79
179
1
176
99
66
84
(EF-hand_1);(S_100)
3
21
32
79
179
1
182
16
19
27
(EF-hand_7);(IQ)
1
31
36
64
77
1
675
97
75
48
(EF-hand_7);(Myosin_head)
1
24
32
53
69
1
222
100
72
45
(EFG_C);(EFG_IV)
1
20
30
23
33
1
502
100
90
87
(EFG_C);(Ribosomal_L11_N)
1
29
29
38
41
1
221
97
17
76
(EFG_II);(Ribosom_S12_S23)
1
39
42
41
48
1
258
100
2
95
(EFTUD2);(WD40)
1
28
28
28
28
1
388
100
18
100
(EFTUD2);(WD40)
2
24
24
28
28
1
444
100
21
86
(EFTUD2);(WD40)
3
24
24
28
28
1
186
100
21
86
(ELFV_dehydrog);(ELFV_dehydrog_N)
1
39
63
39
63
1
861
100
89
100
(ELFV_dehydrog);(ELFV_dehydrog_N)
2
33
51
39
63
1
244
96
84
85
(ELFV_dehydrog);(ELFV_dehydrog_N)
3
26
39
39
63
1
192
95
82
67
(Endonuclease_NS);(Phosphodiest)
1
21
43
26
54
1
763
100
100
81
(Enolase_C);(Enolase_N)
1
37
80
37
80
1
646
95
99
100
(Enolase_C);(Enolase_N)
2
37
80
37
80
1
1491
100
100
100
(EphA2_TM);(Pkinase_Tyr)
1
26
93
26
98
1
492
100
100
100
(FAD_binding_6);(NAD_binding_1)
1
60
118
65
139
1
806
100
100
92
(FERM_C);(FERM_M)
1
33
38
37
42
1
506
100
100
89
(FERM_C);(FERM_N)
1
30
35
36
41
1
278
100
100
83
(FERM_M);(FERM_N)
1
38
45
44
52
1
506
100
100
86
(FG-GAP);(Integrin_alpha2)
1
28
49
29
50
1
320
94
86
97
(FG-GAP);(Integrin_beta)
1
34
58
37
68
1
268
91
86
92
(FGGY_C);(FGGY_N)
1
35
72
35
72
1
1879
100
100
100
(FKBP_C);(RYDR_ITPR)
1
31
31
31
31
1
328
100
0
100
(FKBP_C);(SPRY)
1
30
30
31
31
1
290
100
0
97
(FXa_inhibition);(Trypsin)
1
48
236
49
269
1
426
97
98
98
(Fe_dep_repr_C);(Fe_dep_repress)
1
28
55
28
55
1
621
100
98
100
(Fer2);(Fer2_2)
1
20
70
20
70
1
728
100
100
100
(Fer2_4);(NADH_4Fe-4S)
1
22
25
22
25
1
289
100
60
100
(Fer4_7);(NADH-G_4Fe-4S_3)
1
20
23
23
34
1
164
100
57
87
(Fer4_7);(Oxidored_q6)
1
25
28
27
30
1
385
100
50
93
(Flagellin_C);(Flagellin_N)
1
27
27
27
27
1
2033
100
56
100
(Flavi_DEAD);(Helicase_C)
1
22
43
28
54
1
919
100
100
79
(Flavi_NS2B);(Peptidase_S7)
1
23
39
25
41
1
1823
90
85
92
(Flavi_NS5);(FtsJ)
1
33
76
33
76
1
707
100
100
100
(Flavi_glycop_C);(Flavi_glycoprot)
1
49
54
85
93
1
707
100
63
58
(Flavi_glycop_C);(Flavi_glycoprot)
2
41
45
85
93
1
267
76
53
48
(Flavi_glycoprot);(Flavi_M)
1
24
24
26
26
1
589
100
8
92
(Fn3-like);(Glyco_hydro_3)
1
25
41
25
50
1
715
100
100
100
(Fn3-like);(Glyco_hydro_3_C)
1
25
41
25
50
1
560
100
100
100
(Formyl_trans_C);(Formyl_trans_N)
1
21
40
21
40
1
648
100
100
100
(FtsZ_C);(Tubulin)
1
31
57
33
60
1
483
100
100
94
(FtsZ_C);(Tubulin)
2
20
44
33
60
1
397
2
18
61
(FumaraseC_C);(Lyase_1)
1
24
32
24
32
1
255
100
100
100
(FumaraseC_C);(Lyase_1)
2
21
24
24
32
1
244
96
100
88
(FumaraseC_C);(Lyase_1)
3
21
27
24
32
1
291
96
100
88
(Furin-like);(Recep_L_domain)
1
47
51
53
57
1
1376
100
92
89
(Furin-like);(Recep_L_domain)
2
43
47
53
57
1
412
100
94
81
(G-alpha);(WD40)
1
24
25
24
25
1
303
100
44
100
(G-alpha);(WD40)
2
24
25
24
25
1
346
100
44
100
(G-gamma);(Myc-LZ)
1
38
55
39
57
1
649
100
75
97
(G-gamma);(WD40)
1
41
54
41
59
1
303
100
74
100
(G-gamma);(WD40)
2
41
54
41
59
1
483
100
74
100
(G-gamma);(WD40)
3
41
54
41
59
1
350
100
74
100
(G-gamma);(WD40)
4
38
51
41
59
1
206
100
73
93
(G10);(PRO8NT)
1
27
27
28
28
1
1194
100
11
96
(G10);(PROCN)
1
25
25
27
27
1
225
100
8
93
(GAF);(PAS_2)
1
29
60
29
69
1
1878
100
98
100
(GAF);(PHY)
1
22
32
22
38
1
654
100
97
100
(GFO_IDH_MocA);(GFO_IDH_MocA_C)
1
48
78
51
88
1
357
100
100
94
(GF_recep_IV);(Recep_L_domain)
1
43
48
46
52
1
543
100
94
93
(GHMP_kinases_C);(GHMP_kinases_N)
1
33
58
37
65
1
152
100
98
89
(GMC_oxred_C);(GMC_oxred_N)
1
33
77
33
109
1
4057
97
96
100
(GP120);(GP41)
1
43
69
43
69
1
2101
99
62
100
(GP120);(GP41)
2
35
57
43
69
1
180
86
42
81
(GP120);(V-set)
1
51
78
143
210
1
241
99
56
36
(GP120);(V-set)
2
38
51
143
210
1
873
98
47
27
(GP120);(V-set)
3
21
31
143
210
1
529
97
52
15
(GP120);(ig)
1
24
32
26
37
1
1049
94
38
92
(GST_C);(GST_N)
1
57
71
57
74
1
564
99
99
100
(GST_C);(GST_N)
2
54
65
57
74
1
296
89
94
95
(GST_C);(GST_N_3)
1
43
59
43
59
1
766
98
98
100
(GST_C);(GST_N_3)
2
35
51
43
59
1
371
84
86
81
(GST_C_2);(GST_N)
1
23
39
23
39
1
496
100
100
100
(GST_C_2);(GST_N)
2
22
38
23
39
1
291
100
100
96
(GST_C_2);(GST_N_2)
1
20
26
20
26
1
630
100
100
100
(GST_C_2);(GST_N_3)
1
71
111
73
117
1
720
100
100
97
(GST_C_2);(GST_N_3)
2
38
53
73
117
1
346
94
91
52
(GST_C_3);(GST_N)
1
90
272
94
276
1
771
100
100
96
(GST_C_3);(GST_N)
2
87
264
94
276
1
249
95
94
93
(GTP_EFTU);(GTP_EFTU_D2)
1
79
122
128
191
1
647
100
93
62
(GTP_EFTU);(GTP_EFTU_D3)
1
34
48
64
98
1
576
100
100
53
(GTP_EFTU);(GTP_EFTU_D3)
2
24
37
64
98
1
615
100
86
38
(GTP_EFTU);(LSM)
1
29
29
38
38
1
212
100
17
76
(GTP_EFTU);(PROCN)
1
35
35
39
39
1
520
100
20
90
(GTP_EFTU_D2);(GTP_EFTU_D3)
1
63
97
68
102
1
444
100
93
93
(Gal_mutarotas_2);(Glyco_hydro_31)
1
39
101
39
102
1
2081
100
100
100
(Glyco_hydro_2);(Glyco_hydro_2_C)
1
64
153
64
153
1
845
99
94
100
(Glyco_hydro_2);(Glyco_hydro_2_N)
1
63
150
65
155
1
230
99
94
97
(Glyco_hydro_2_C);(Glyco_hydro_2_N)
1
64
153
65
155
1
1530
99
94
98
(Glyco_hydro_3);(Glyco_hydro_3_C)
1
35
83
37
85
1
1841
100
100
95
(Glyco_tran_28_C);(Glyco_transf_28)
1
26
38
27
42
1
569
97
97
96
(Glyco_transf_4);(Glycos_transf_1)
1
28
49
28
49
1
614
98
98
100
(Gp_dh_C);(Gp_dh_N)
1
84
151
85
152
1
461
91
96
99
(Gp_dh_C);(Gp_dh_N)
2
84
150
85
152
1
235
91
94
99
(Gp_dh_C);(Gp_dh_N)
3
79
142
85
152
1
154
100
100
93
(HABP4_PAI-RBP1);(KH_2)
1
20
27
25
39
1
120
100
26
80
(HABP4_PAI-RBP1);(Ribosomal_S3_C)
1
26
40
27
41
1
730
100
28
96
(HABP4_PAI-RBP1);(Ribosomal_S5)
1
26
40
27
41
1
230
100
28
96
(HATPase_c);(HSP90)
1
51
371
55
412
1
1080
100
99
93
(HATPase_c);(HisKA)
1
21
28
23
30
1
427
100
100
91
(HEAT_2);(MitMem_reg)
1
22
22
47
47
1
125
100
14
47
(Hexokinase_1);(Hexokinase_2)
1
33
64
33
66
1
3545
100
98
100
(Histone);(Histone_H2A_C)
1
92
231
94
233
1
444
99
84
98
(Histone);(TAF)
1
97
245
97
245
1
2178
96
84
100
(Histone);(TAF)
2
78
217
97
245
1
453
98
83
80
(Histone_H2A_C);(TAF)
1
77
215
79
218
1
159
98
82
97
(Hydrolase_6);(Hydrolase_like)
1
28
43
28
44
1
1201
100
100
100
(IBN_N);(Ras)
1
26
61
27
63
1
401
97
87
96
(IBN_N);(Xpo1)
1
20
22
21
29
1
906
100
95
95
(IMS);(IMS_C)
1
37
332
42
353
1
568
100
99
88
(IMS);(IMS_HHH)
1
41
346
41
352
1
299
100
99
100
(Ig_3);(I-set)
1
28
30
89
98
1
146
100
100
31
(Ig_3);(I-set)
2
26
29
89
98
1
181
76
76
29
(IlvC);(IlvN)
1
21
26
21
26
1
515
96
85
100
(IlvC);(IlvN)
2
21
26
21
26
1
638
100
85
100
(Inhibitor_I9);(Peptidase_S8)
1
21
28
27
36
1
1158
93
100
78
(Ins145_P3_rec);(MIR)
1
58
68
59
69
1
738
100
32
98
(Ins145_P3_rec);(MIR)
2
29
29
59
69
1
276
100
7
49
(Ins145_P3_rec);(RIH_assoc)
1
36
36
45
45
1
303
100
6
80
(Ins145_P3_rec);(RYDR_ITPR)
1
42
50
57
67
1
165
100
30
74
(Ins145_P3_rec);(RYDR_ITPR)
2
32
32
57
67
1
173
100
6
56
(Interfer-bind);(Tissue_fac)
1
27
57
33
70
1
449
96
95
82
(Ion_trans);(RR_TM4-6)
1
36
36
36
36
1
465
100
6
100
(Ion_trans);(RR_TM4-6)
2
35
35
36
36
1
1111
100
6
97
(Ion_trans);(RR_TM4-6)
3
20
20
36
36
1
214
100
0
56
(JAB);(MitMem_reg)
1
68
70
71
73
1
261
96
36
96
(JAB);(PC_rep)
1
49
49
55
55
1
180
98
24
89
(JAB);(Prot_ATP_ID_OB)
1
22
22
53
53
1
133
100
23
42
(JAB);(VWA_2)
1
55
55
55
55
1
618
98
25
100
(JmjC);(JmjN)
1
28
432
28
434
1
791
100
100
100
(KAsynt_C_assoc);(Ketoacyl-synt_C)
1
41
66
41
66
1
2389
98
95
100
(KAsynt_C_assoc);(ketoacyl-synt)
1
41
66
44
69
1
921
98
95
93
(KAsynt_C_assoc);(ketoacyl-synt)
2
33
58
44
69
1
181
98
97
75
(KH_2);(Ribosomal_S10)
1
138
167
363
631
1
151
100
17
38
(KH_2);(Ribosomal_S14)
1
110
323
359
626
1
116
100
19
31
(KH_2);(Ribosomal_S14)
2
40
40
359
626
1
131
100
15
11
(KH_2);(S10_plectin)
1
119
133
119
133
1
841
100
17
100
(KOW);(Ribosomal_L18A)
1
128
142
132
146
1
246
100
17
97
(KOW);(Ribosomal_L34e)
1
126
140
130
144
1
324
100
16
97
(KOW);(Ribosomal_L6)
1
56
56
60
60
1
167
100
7
93
(KOW);(Ribosomal_L7Ae)
1
126
140
129
143
1
276
100
16
98
(Kinesin);(Tubulin)
1
21
21
32
32
1
197
100
33
66
(Kunitz_BPTI);(Trypsin)
1
41
96
44
99
1
708
100
99
93
(LRR_4);(LRR_8)
1
86
125
102
144
1
698
98
91
84
(LRR_8);(LRRCT)
1
45
82
55
94
1
173
98
91
82
(LRR_8);(LRRNT)
1
94
108
116
143
1
676
95
87
81
(LRR_8);(LRRNT_2)
1
20
23
34
40
1
841
100
96
59
(LRR_9);(RRM_1)
1
33
33
36
36
1
523
100
18
92
(Ldh_1_C);(Ldh_1_N)
1
116
248
116
249
1
1684
100
97
100
(Ldh_1_C);(Ldh_1_N)
2
114
245
116
249
1
907
97
97
98
(Ldh_1_C);(Ldh_1_N)
3
67
159
116
249
1
245
94
91
58
(Lectin_C);(Ly49)
1
36
66
37
69
1
643
82
79
97
(Lig_chan);(Lig_chan-Glu_bd)
1
133
398
146
415
1
311
98
87
91
(Lig_chan);(SBP_bac_3)
1
58
185
68
208
1
667
99
81
85
(Lig_chan-Glu_bd);(SBP_bac_3)
1
61
194
71
216
1
2291
99
81
86
(Lig_chan-Glu_bd);(SBP_bac_3)
2
55
196
71
216
1
243
84
52
77
(Lig_chan-Glu_bd);(SBP_bac_3)
3
21
21
71
216
1
209
100
0
30
(M20_dimer);(Peptidase_M20)
1
49
63
52
66
1
1357
100
100
94
(M20_dimer);(Peptidase_M20)
2
35
46
52
66
1
424
98
100
67
(MA3);(RRM_4)
1
23
23
24
24
1
638
100
13
96
(MA3);(U5_2-snRNA_bdg)
1
23
23
24
24
1
402
100
13
96
(MCM_N);(MCM_OB)
1
23
24
24
25
1
480
100
62
96
(MHC_I);(V-set)
2
97
185
115
204
1
356
93
47
84
(MHC_I);(V-set)
1
98
178
115
204
1
423
93
49
85
(MHC_II_alpha);(MHC_II_beta)
1
129
177
131
182
1
945
98
98
98
(MHC_II_alpha);(V-set)
1
39
51
42
55
1
272
94
35
93
(MHC_II_alpha);(V-set)
2
22
25
42
55
1
138
92
36
52
(MHC_II_beta);(V-set)
1
37
43
42
55
1
313
93
26
88
(MHC_II_beta);(V-set)
2
30
38
42
55
1
183
95
29
71
(MIR);(RYDR_ITPR)
1
55
64
60
70
1
221
100
34
92
(MR_MLE_C);(MR_MLE_N)
1
180
295
180
297
1
1743
98
98
100
(MR_MLE_C);(MR_MLE_N)
2
101
161
180
297
1
321
77
88
56
(MR_MLE_C);(MR_MLE_N)
3
75
113
180
297
1
129
64
88
42
(Metallophos);(STPPase_N)
1
46
62
50
68
1
1908
98
92
92
(MitMem_reg);(PCI)
1
56
56
61
61
1
272
96
25
92
(MitMem_reg);(Prot_ATP_ID_OB)
1
32
32
53
53
1
240
100
25
60
(MitMem_reg);(Rpn3_C)
1
43
43
57
57
1
634
100
16
75
(Molybdopterin);(Molydop_binding)
1
24
59
28
64
1
2089
100
93
86
(Mur_ligase_C);(Mur_ligase_M)
1
31
62
34
66
1
566
100
100
91
(Myb_DNA-binding);(RRM_4)
1
28
28
29
29
1
368
100
14
97
(Myb_DNA-binding);(SKIP_SNW)
1
26
26
29
29
1
285
100
8
90
(Myosin_head);(Myosin_N)
1
58
115
58
120
1
302
99
87
100
(NADH_4Fe-4S);(NADH-G_4Fe-4S_3)
1
22
25
22
25
1
392
100
60
100
(NADHdh);(Oxidored_q3)
1
22
22
22
22
1
950
100
41
100
(NADHdh);(Oxidored_q4)
1
22
22
22
22
1
1986
100
41
100
(NADHdh);(Oxidored_q6)
1
21
21
21
21
1
838
100
38
100
(NAD_binding_11);(NAD_binding_2)
1
35
54
35
54
1
515
100
100
100
(Neur_chan_LBD);(Neur_chan_memb)
1
53
154
57
179
1
484
99
92
93
(Neur_chan_LBD);(Neur_chan_memb)
2
24
40
57
179
1
138
100
82
42
(NiFeSe_Hases);(Oxidored_q6)
1
29
106
32
118
1
1942
100
97
91
(NiFe_hyd_SSU_C);(NiFeSe_Hases)
1
23
96
26
112
1
1235
99
99
88
(Nop);(Ribosomal_L7Ae)
1
26
28
27
29
1
504
100
57
96
(OTCace);(OTCace_N)
1
64
139
64
145
1
2203
100
99
100
(OTCace);(OTCace_N)
2
64
139
64
145
1
481
94
100
100
(Oxidored_q2);(Oxidored_q3)
1
23
23
23
23
1
2698
100
43
100
(Oxidored_q2);(Oxidored_q4)
1
23
23
23
23
1
396
100
43
100
(Oxidored_q2);(Proton_antipo_M)
1
24
24
24
24
1
1618
100
42
100
(Oxidored_q3);(Oxidored_q4)
1
22
22
23
23
1
1660
100
41
96
(Oxidored_q3);(Proton_antipo_M)
1
23
23
23
23
1
579
100
43
100
(PARP);(PARP_reg)
1
21
72
22
73
1
1230
100
100
95
(PBP_dimer);(Transpeptidase)
1
35
95
35
95
1
923
100
99
100
(PCI);(RPN7)
1
33
33
59
59
1
131
100
27
56
(PCNA_C);(PCNA_N)
1
74
100
78
104
1
844
98
97
95
(PCNA_C);(PCNA_N)
2
51
71
78
104
1
674
87
76
65
(PGM_PMM_I);(PGM_PMM_III)
1
20
64
21
71
1
477
100
100
95
(PGM_PMM_III);(PGM_PMM_IV)
1
21
64
21
71
1
832
100
100
100
(PI3K_C2);(PI3Ka)
1
25
188
27
195
1
872
99
99
93
(PI3_PI4_kinase);(PI3K_rbd)
1
23
146
28
196
1
242
99
99
82
(PI3_PI4_kinase);(PI3Ka)
1
38
217
41
225
1
1108
99
99
93
(PK);(PK_C)
1
49
91
49
92
1
1392
100
100
100
(PRO8NT);(SKIP_SNW)
1
27
27
29
29
1
273
100
15
93
(PROCN);(SKIP_SNW)
1
29
29
29
29
1
1455
100
14
100
(PROCN);(WD40)
1
27
27
29
29
1
281
100
15
93
(PROCN);(WD40)
2
26
26
29
29
1
168
100
12
90
(PROCN);(WD40)
3
26
26
29
29
1
260
100
12
90
(PROCN);(WD40)
4
26
26
29
29
1
173
100
12
90
(PROCN);(WD40)
5
25
25
29
29
1
265
100
8
86
(PROCT);(Sec63)
1
25
26
26
27
1
930
96
35
96
(PRY);(SPRY)
1
21
27
21
27
1
1212
89
93
100
(PSI);(Sema)
1
29
29
30
30
1
421
100
97
97
(PapD_C);(PapD_N)
1
28
39
33
46
1
529
100
100
85
(Peptidase_M16);(Peptidase_M16_C)
1
60
122
76
145
1
593
98
87
79
(Peptidase_M16);(Peptidase_M16_C)
2
43
72
76
145
1
2614
99
88
57
(Peptidase_M16);(Peptidase_M16_M)
1
23
46
28
56
1
1256
100
85
82
(Peptidase_M16);(UCR_14kD)
1
25
46
28
49
1
393
80
78
89
(Peptidase_M16);(UCR_TM)
1
30
52
30
62
1
471
100
81
100
(Peptidase_M16);(Ubiq-Cytc-red_N)
1
22
48
22
49
1
696
100
81
100
(Peptidase_M16_C);(Peptidase_M16_M)
1
27
55
30
58
1
247
25
5
90
(Peptidase_M16_C);(Peptidase_M16_M)
2
23
46
30
58
1
4436
100
85
77
(Peptidase_M16_C);(Peptidase_M16_M)
3
23
46
30
58
1
3548
100
85
77
(Peptidase_M16_C);(UCR_TM)
1
28
45
30
62
1
347
100
78
93
(Peptidase_M16_C);(Ubiq-Cytc-red_N)
1
21
46
22
50
1
479
100
83
95
(Peptidase_M16_C);(UcrQ)
1
30
63
30
64
1
580
100
83
100
(Peptidase_M27);(Toxin_trans)
1
20
31
22
34
1
1136
100
100
91
(Peptidase_S9);(Peptidase_S9_N)
1
22
57
28
69
1
3391
100
98
79
(Phosphodiest);(Somatomedin_B)
1
20
42
21
43
1
475
100
100
95
(Pico_P1A);(Rhv)
1
58
142
69
154
1
375
97
60
84
(Pico_P1A);(Rhv)
2
48
120
69
154
1
547
98
54
70
(Pico_P1A);(Rhv)
3
45
117
69
154
1
395
99
54
65
(Pkinase);(Pkinase_C)
1
44
102
52
117
1
1368
100
100
85
(Plug);(TonB_dep_Rec)
1
44
79
44
82
1
3442
100
97
100
(Plug_translocon);(SecE)
1
20
23
21
24
1
268
91
52
95
(Pr_beta_C);(Proteasome)
1
65
317
69
355
1
671
87
71
94
(Pr_beta_C);(Proteasome)
2
50
304
69
355
1
637
95
82
72
(Pr_beta_C);(Proteasome)
3
24
86
69
355
1
156
100
85
35
(Pre-SET);(SET)
1
22
44
23
47
1
1743
100
100
96
(ProRS-C_1);(tRNA-synt_2b)
1
20
35
20
35
1
951
100
100
100
(Proteasome);(Proteasome_A_N)
1
94
364
94
386
1
234
100
84
100
(Proteasome);(Proteasome_A_N)
3
56
317
94
386
1
155
100
86
60
(Proteasome);(Proteasome_A_N)
2
57
149
94
386
1
474
99
77
61
(Proton_antipo_M);(Proton_antipo_N)
1
22
22
23
23
1
241
100
41
96
(Prp19);(zf-Nse)
1
23
23
25
25
1
283
100
17
92
(Pyr_redox_2);(Pyr_redox_dim)
1
92
195
93
196
1
603
96
100
99
(Pyr_redox_2);(Pyr_redox_dim)
2
90
192
93
196
1
1172
100
100
97
(RAG1);(RAG2)
1
20
24
20
24
1
1536
100
33
100
(RNA_POL_M_15KD);(RNA_pol_Rpb1_7)
1
68
163
69
165
1
321
100
74
99
(RNA_POL_M_15KD);(RNA_pol_Rpb2_2)
1
111
207
112
209
1
510
100
63
99
(RNA_polI_A14);(SHS2_Rpb7-N)
1
28
29
28
29
1
872
100
66
100
(RNA_pol_A_bac);(RNA_pol_L)
1
41
64
86
164
1
1354
98
88
48
(RNA_pol_A_bac);(RNA_pol_L)
2
23
37
86
164
1
142
100
73
27
(RNA_pol_A_bac);(RNA_pol_N)
1
118
215
119
218
1
899
100
75
99
(RNA_pol_A_bac);(RNA_pol_Rpb1_3)
1
64
108
88
168
1
576
100
77
73
(RNA_pol_A_bac);(RNA_pol_Rpb1_3)
2
22
58
88
168
1
305
100
91
25
(RNA_pol_A_bac);(RNA_pol_Rpb2_6)
1
129
302
208
386
1
958
100
86
62
(RNA_pol_A_bac);(RNA_pol_Rpb2_6)
2
78
80
208
386
1
542
100
49
38
(RNA_pol_I_A49);(RNA_POL_M_15KD)
1
24
25
24
25
1
246
100
80
100
(RNA_pol_I_A49);(RNA_polI_A34)
1
26
27
26
27
1
994
100
81
100
(RNA_pol_I_A49);(RNA_pol_Rpb2_2)
1
23
24
23
24
1
565
100
79
100
(RNA_pol_L);(RNA_pol_Rpb1_2)
1
81
156
89
169
1
212
100
83
91
(RNA_pol_L);(RNA_pol_Rpb1_3)
1
63
107
89
169
1
319
100
78
71
(RNA_pol_L);(RNA_pol_Rpb1_3)
2
23
54
89
169
1
141
96
85
26
(RNA_pol_L);(RNA_pol_Rpb2_6)
1
95
176
97
179
1
384
100
84
98
(RNA_pol_L_2);(RNA_pol_Rpb1_2)
1
117
214
118
215
1
224
100
57
99
(RNA_pol_L_2);(RNA_pol_Rpb1_3)
1
118
215
119
218
1
532
100
57
99
(RNA_pol_L_2);(RNA_pol_Rpb2_6)
1
117
214
118
215
1
257
100
67
99
(RNA_pol_L_2);(RNA_pol_Rpb8)
1
84
179
108
204
1
173
100
50
78
(RNA_pol_N);(RNA_pol_Rpb2_1)
1
95
192
118
215
1
256
100
81
81
(RNA_pol_N);(RNA_pol_Rpb2_6)
1
119
218
119
218
1
1328
100
74
100
(RNA_pol_Rpa2_4);(RNA_polI_A34)
1
23
24
24
25
1
256
100
79
96
(RNA_pol_Rpa2_4);(RNA_pol_Rpb1_4)
1
26
27
27
28
1
162
100
81
96
(RNA_pol_Rpb1_1);(RNA_pol_Rpb1_5)
1
26
41
47
98
1
164
100
90
55
(RNA_pol_Rpb1_1);(RNA_pol_Rpb2_6)
1
194
362
204
372
1
382
100
73
95
(RNA_pol_Rpb1_1);(RNA_pol_Rpb2_7)
1
205
384
210
390
1
1563
100
73
98
(RNA_pol_Rpb1_1);(SHS2_Rpb7-N)
1
43
44
80
120
1
276
100
73
54
(RNA_pol_Rpb1_1);(Sigma70_r1_2)
1
47
116
47
116
1
308
100
87
100
(RNA_pol_Rpb1_1);(Sigma70_r2)
1
51
124
52
126
1
787
100
87
98
(RNA_pol_Rpb1_1);(Sigma70_r3)
1
48
117
49
119
1
682
100
86
98
(RNA_pol_Rpb1_1);(Sigma70_r4)
1
22
52
33
72
1
123
100
94
67
(RNA_pol_Rpb1_1);(TFIIE_alpha)
1
24
24
28
28
1
1135
100
38
86
(RNA_pol_Rpb1_1);(TF_Zn_Ribbon)
1
31
32
31
32
1
285
100
25
100
(RNA_pol_Rpb1_2);(RNA_pol_Rpb1_3)
1
28
42
30
44
1
663
100
81
93
(RNA_pol_Rpb1_2);(RNA_pol_Rpb1_5)
1
34
49
37
52
1
216
100
84
92
(RNA_pol_Rpb1_2);(RNA_pol_Rpb2_6)
1
209
388
209
389
1
1302
100
72
100
(RNA_pol_Rpb1_2);(RNA_pol_Rpb2_7)
1
209
388
209
388
1
1361
100
72
100
(RNA_pol_Rpb1_2);(RNA_pol_Rpb6)
1
204
381
207
386
1
743
100
78
99
(RNA_pol_Rpb1_2);(SHS2_Rpb7-N)
1
27
28
107
152
1
200
100
82
25
(RNA_pol_Rpb1_2);(Sigma70_r3)
1
25
59
45
113
1
132
100
88
56
(RNA_pol_Rpb1_2);(TF_Zn_Ribbon)
1
31
32
31
32
1
465
100
25
100
(RNA_pol_Rpb1_3);(RNA_pol_Rpb1_4)
1
28
42
33
49
1
626
100
81
85
(RNA_pol_Rpb1_3);(RNA_pol_Rpb1_5)
1
35
51
39
55
1
208
100
84
90
(RNA_pol_Rpb1_3);(RNA_pol_Rpb2_6)
1
209
388
209
388
1
1013
100
72
100
(RNA_pol_Rpb1_3);(RNA_pol_Rpb6)
1
61
125
73
150
1
182
100
88
84
(RNA_pol_Rpb1_3);(RNA_pol_Rpb8)
1
111
209
112
210
1
1363
100
69
99
(RNA_pol_Rpb1_4);(RNA_pol_Rpb1_5)
1
30
44
39
55
1
498
100
82
77
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_3)
1
137
269
205
382
1
241
100
72
67
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_45)
1
30
65
79
153
1
238
100
89
38
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_5)
1
91
187
92
190
1
385
100
63
99
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_6)
1
206
382
208
386
1
477
100
73
99
(RNA_pol_Rpb1_4);(RNA_pol_Rpb8)
1
21
21
93
189
1
132
100
67
23
(RNA_pol_Rpb1_4);(TFIIS_C)
1
69
163
81
178
1
539
94
67
85
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_3)
1
204
381
207
386
1
596
100
74
99
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_45)
1
78
157
86
166
1
170
100
86
91
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_5)
1
59
154
91
187
1
208
100
66
65
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_6)
1
139
257
206
385
1
336
100
70
67
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_7)
1
204
381
208
385
1
306
100
73
98
(RNA_pol_Rpb1_5);(RNA_pol_Rpb5_C)
1
119
218
119
218
1
1353
100
70
100
(RNA_pol_Rpb1_5);(RNA_pol_Rpb5_N)
1
53
109
109
205
1
125
100
72
49
(RNA_pol_Rpb1_5);(RNA_pol_Rpb6)
1
183
328
193
338
1
218
100
77
95
(RNA_pol_Rpb1_5);(TFIIS_C)
1
21
23
24
27
1
401
100
57
88
(RNA_pol_Rpb1_6);(RNA_pol_Rpb5_C)
1
69
164
71
168
1
582
100
73
97
(RNA_pol_Rpb1_6);(RNA_pol_Rpb6)
1
63
158
71
166
1
163
100
73
89
(RNA_pol_Rpb1_7);(RNA_pol_Rpb2_2)
1
44
136
68
163
1
142
100
68
65
(RNA_pol_Rpb2_1);(RNA_pol_Rpb2_2)
1
21
33
36
72
1
851
100
82
58
(RNA_pol_Rpb2_1);(RNA_pol_Rpb2_3)
1
21
33
23
37
1
1054
100
79
91
(RNA_pol_Rpb2_1);(RNA_pol_Rpb2_6)
1
20
32
25
42
1
376
100
81
80
(RNA_pol_Rpb2_1);(Sigma70_r3)
1
36
104
42
112
1
277
100
96
86
(RNA_pol_Rpb2_1);(TFIIB)
1
30
31
30
31
1
426
100
19
100
(RNA_pol_Rpb2_2);(RNA_pol_Rpb2_3)
1
20
32
23
37
1
387
100
81
87
(RNA_pol_Rpb2_2);(TFIIS_C)
1
66
160
70
166
1
171
94
55
94
(RNA_pol_Rpb2_3);(RNA_pol_Rpb2_6)
1
20
32
22
36
1
543
100
81
91
(RNA_pol_Rpb2_6);(RNA_polI_A34)
1
24
25
24
25
1
631
100
80
100
(RNA_pol_Rpb2_6);(RNA_pol_Rpb2_7)
1
21
33
23
37
1
425
100
79
91
(RNA_pol_Rpb2_6);(Sigma70_r3)
1
49
118
49
119
1
547
100
88
100
(RNA_pol_Rpb2_6);(Sigma70_r4)
1
46
115
48
117
1
377
100
90
96
(RNA_pol_Rpb2_6);(TFIIB)
1
29
30
30
31
1
328
100
20
97
(RNA_pol_Rpb2_6);(TF_Zn_Ribbon)
1
31
32
31
32
1
609
100
19
100
(RNA_pol_Rpb2_7);(RNA_polI_A14)
1
22
23
27
28
1
138
100
74
81
(RNA_pol_Rpb2_7);(RNA_pol_Rpb6)
1
90
165
203
380
1
196
100
81
44
(RNA_pol_Rpb2_7);(SHS2_Rpb7-N)
1
63
65
104
149
1
177
100
63
61
(RNA_pol_Rpb2_7);(Sigma70_r3)
1
44
113
46
115
1
232
100
90
96
(RNA_pol_Rpb4);(S1)
1
72
116
73
118
1
642
100
51
99
(RNA_pol_Rpb4);(SHS2_Rpb7-N)
1
89
133
89
133
1
815
100
53
100
(RNA_pol_Rpb6);(SHS2_Rpb7-N)
1
109
154
110
156
1
372
99
55
99
(RNase_H);(RVT_connect)
1
35
274
35
283
1
420
100
99
100
(RNase_H);(RVT_thumb)
1
35
262
35
275
1
600
93
93
100
(RNase_PH);(RNase_PH_C)
1
40
58
43
63
1
199
100
91
93
(RNase_PH);(RNase_PH_C)
2
37
56
43
63
1
862
100
95
86
(RRM_4);(SKIP_SNW)
1
26
26
27
27
1
248
100
12
96
(RVT_1);(RVT_connect)
1
36
275
36
284
1
873
100
99
100
(RVT_1);(RVT_connect)
2
35
274
36
284
1
342
100
99
97
(RVT_1);(RVT_connect)
3
33
261
36
284
1
121
100
100
92
(RVT_1);(RVT_thumb)
1
35
274
37
285
1
246
100
100
95
(RVT_connect);(RVT_thumb)
1
35
274
35
283
1
371
100
99
100
(RVT_connect);(RVT_thumb)
2
29
261
35
283
1
415
100
100
83
(Ras);(Xpo1)
1
22
56
23
57
1
433
98
89
96
(Rhv);(VP4_2)
1
20
27
22
32
1
252
96
56
91
(Ribos_L4_asso_C);(Ribosomal_L18)
1
129
143
135
149
1
944
100
16
96
(Ribos_L4_asso_C);(Ribosomal_L28e)
1
63
63
67
67
1
164
100
8
94
(Ribos_L4_asso_C);(Ribosomal_L30_N)
1
124
138
129
143
1
412
100
17
96
(Ribos_L4_asso_C);(Ribosomal_L6e_N)
1
39
39
41
41
1
312
100
3
95
(Ribosom_S12_S23);(Ribosomal_S17)
1
78
271
88
287
1
218
100
25
89
(Ribosom_S12_S23);(Ribosomal_S30)
1
127
141
129
143
1
448
100
17
98
(Ribosomal_L10);(Ribosomal_L11)
1
123
129
165
176
1
159
100
25
75
(Ribosomal_L13);(Ribosomal_L20)
1
266
429
274
444
1
314
100
19
97
(Ribosomal_L13);(Ribosomal_L3)
1
250
406
408
651
1
147
99
19
61
(Ribosomal_L13);(Ribosomal_L3)
2
132
204
408
651
1
222
100
11
32
(Ribosomal_L13);(Ribosomal_L35Ae)
1
126
140
135
149
1
226
100
16
93
(Ribosomal_L13e);(Ribosomal_L18)
1
114
128
119
133
1
226
100
16
96
(Ribosomal_L13e);(Ribosomal_L27A)
1
124
138
125
139
1
1464
100
16
99
(Ribosomal_L13e);(Ribosomal_L36e)
1
124
138
124
138
1
531
100
16
100
(Ribosomal_L13e);(Ribosomal_L4)
1
125
139
125
139
1
201
100
17
100
(Ribosomal_L14);(Ribosomal_L19)
1
273
438
274
444
1
792
100
17
100
(Ribosomal_L14);(Ribosomal_L24e)
1
153
228
153
228
1
508
100
13
100
(Ribosomal_L14);(Ribosomal_L3)
1
238
432
412
653
1
243
100
11
58
(Ribosomal_L14);(Ribosomal_L3)
2
113
116
412
653
1
121
100
27
27
(Ribosomal_L14e);(Ribosomal_L18A)
1
110
124
134
148
1
122
100
17
82
(Ribosomal_L14e);(Ribosomal_L6e)
1
126
140
134
148
1
485
100
16
94
(Ribosomal_L15e);(Ribosomal_L36e)
1
126
140
134
148
1
527
100
16
94
(Ribosomal_L15e);(Ribosomal_L44)
1
126
198
133
207
1
161
100
41
95
(Ribosomal_L15e);(Ribosomal_L7Ae)
1
140
212
147
221
1
563
100
11
95
(Ribosomal_L16);(Ribosomal_L25p)
1
238
402
242
411
1
539
100
16
98
(Ribosomal_L16);(Ribosomal_L27)
1
72
139
173
316
1
251
100
9
42
(Ribosomal_L16);(Ribosomal_TL5_C)
1
89
180
90
230
1
425
100
12
99
(Ribosomal_L17);(Ribosomal_L22)
1
99
214
264
428
1
127
100
7
38
(Ribosomal_L17);(Ribosomal_L32p)
1
270
434
274
444
1
332
100
18
99
(Ribosomal_L18);(Ribosomal_L27A)
1
135
209
139
213
1
665
100
11
97
(Ribosomal_L18);(Ribosomal_L28e)
1
62
62
63
63
1
223
100
8
98
(Ribosomal_L18);(Ribosomal_L30)
1
121
135
124
138
1
251
100
16
98
(Ribosomal_L18);(Ribosomal_L4)
1
137
192
144
216
1
182
100
12
95
(Ribosomal_L18A);(Ribosomal_L30_N)
1
124
138
133
147
1
171
100
17
93
(Ribosomal_L18p);(Ribosomal_L27)
1
50
93
203
357
1
156
100
12
25
(Ribosomal_L19);(Ribosomal_L3)
1
202
251
273
440
1
634
100
21
74
(Ribosomal_L19);(Ribosomal_L3)
2
77
183
273
440
1
725
100
14
28
(Ribosomal_L2);(Ribosomal_L37ae)
1
137
211
138
212
1
470
100
10
99
(Ribosomal_L20);(Ribosomal_L21p)
1
270
434
273
444
1
957
100
17
99
(Ribosomal_L20);(Ribosomal_L32p)
1
63
74
252
416
1
110
100
22
25
(Ribosomal_L21e);(Ribosomal_L29e)
1
116
130
116
130
1
474
100
15
100
(Ribosomal_L21e);(Ribosomal_L5e)
1
130
204
132
206
1
755
100
10
98
(Ribosomal_L22);(Ribosomal_L32p)
1
268
432
270
437
1
465
100
19
99
(Ribosomal_L23);(Ribosomal_L29)
1
394
627
408
650
1
433
100
16
97
(Ribosomal_L23);(Ribosomal_L39)
1
136
208
141
213
1
232
100
12
96
(Ribosomal_L24e);(Ribosomal_L3)
1
139
211
140
214
1
247
100
13
99
(Ribosomal_L26);(Ribosomal_L4)
1
49
49
142
214
1
193
100
27
35
(Ribosomal_L26);(Ribosomal_L4)
2
30
44
142
214
10
195
100
25
21
(Ribosomal_L27A);(Ribosomal_L35p)
1
252
409
271
442
1
775
100
16
93
(Ribosomal_L27A);(Ribosomal_L36e)
1
118
132
121
135
1
228
100
16
98
(Ribosomal_L27e);(Ribosomal_L34e)
1
122
136
127
141
1
338
100
16
96
(Ribosomal_L27e);(Ribosomal_L7Ae)
1
122
136
124
138
1
291
100
16
98
(Ribosomal_L28);(Ribosomal_L9_N)
1
201
333
208
343
1
233
99
16
97
(Ribosomal_L28e);(Ribosomal_L32e)
1
67
67
69
69
1
701
100
9
97
(Ribosomal_L28e);(Ribosomal_L4)
1
69
69
69
69
1
697
100
9
100
(Ribosomal_L2_C);(Ribosomal_L37ae)
1
136
210
138
212
1
806
100
10
99
(Ribosomal_L2_C);(Ribosomal_L9_C)
1
60
60
87
87
1
161
100
30
69
(Ribosomal_L2_C);(Ribosomal_S6)
1
33
61
165
293
1
128
100
13
20
(Ribosomal_L3);(Ribosomal_S6e)
1
24
38
26
40
1
128
100
29
92
(Ribosomal_L31);(Ribosomal_L5)
1
145
254
158
279
1
241
100
18
92
(Ribosomal_L31);(Ribosomal_L5_C)
1
139
253
159
280
1
710
100
16
87
(Ribosomal_L31);(Ribosomal_S13)
1
108
218
132
250
1
385
100
17
82
(Ribosomal_L31);(Ribosomal_S19)
1
106
195
121
214
1
420
100
21
88
(Ribosomal_L33);(Ribosomal_L35p)
1
193
321
252
393
1
145
100
14
77
(Ribosomal_L34e);(Ribosomal_L7Ae)
1
124
138
126
140
1
227
100
16
98
(Ribosomal_L35Ae);(Ribosomal_L6e)
1
132
146
134
148
1
698
100
16
99
(Ribosomal_L36e);(Ribosomal_L7Ae)
1
124
138
129
143
1
254
100
17
96
(Ribosomal_L37ae);(Ribosomal_L7Ae)
1
124
138
129
143
1
162
100
16
96
(Ribosomal_L37ae);(Ribosomal_S3Ae)
1
27
41
34
48
1
133
100
22
79
(Ribosomal_L37e);(Ribosomal_L39)
1
132
204
134
208
1
207
100
11
99
(Ribosomal_L40e);(Ribosomal_L6)
1
118
132
118
132
1
389
100
18
100
(Ribosomal_L5);(Stm1_N)
1
25
39
25
39
1
458
100
28
100
(Ribosomal_L5_C);(Ribosomal_L5e)
1
134
207
141
214
1
215
100
11
95
(Ribosomal_L5_C);(Ribosomal_S13)
1
145
276
289
454
1
252
100
14
50
(Ribosomal_L5_C);(Ribosomal_S13)
2
69
107
289
454
1
229
100
13
24
(Ribosomal_L5_C);(Ribosomal_S13)
3
35
35
289
454
1
176
100
3
12
(Ribosomal_L5_C);(Stm1_N)
1
22
35
25
39
1
109
100
26
88
(Ribosomal_L7Ae);(Ribosomal_S13_N)
1
28
28
49
49
1
116
100
0
57
(Ribosomal_L7Ae);(Ribosomal_S15)
1
44
44
71
71
1
262
100
2
62
(Ribosomal_L7Ae);(Ribosomal_S27)
1
117
131
119
133
1
517
100
18
98
(Ribosomal_L7Ae);(S10_plectin)
1
52
52
116
130
1
200
100
13
45
(Ribosomal_L9_C);(Ribosomal_S6)
1
49
49
63
63
1
172
100
33
78
(Ribosomal_S10);(Ribosomal_S14)
1
390
656
394
666
1
781
100
19
99
(Ribosomal_S10);(Ribosomal_S9)
1
319
555
387
646
1
156
99
14
82
(Ribosomal_S11);(Ribosomal_S18)
1
175
415
242
500
1
278
100
12
72
(Ribosomal_S11);(Ribosomal_S21)
1
140
167
147
174
1
1014
100
20
95
(Ribosomal_S11);(Ribosomal_S26e)
1
117
131
117
131
1
1087
100
17
100
(Ribosomal_S11);(Ribosomal_S28e)
1
61
61
66
66
1
266
100
8
92
(Ribosomal_S11);(Ribosomal_S3Ae)
1
131
145
133
147
1
743
100
18
98
(Ribosomal_S11);(Ribosomal_S7)
1
279
508
358
616
1
216
100
18
78
(Ribosomal_S13);(Ribosomal_S19)
1
365
627
384
654
1
394
100
14
95
(Ribosomal_S13);(Ribosomal_S19e)
1
126
140
131
145
1
436
100
19
96
(Ribosomal_S13);(Ribosomal_S25)
1
114
128
126
140
1
179
100
18
90
(Ribosomal_S13);(Stm1_N)
1
23
37
25
39
1
495
100
30
92
(Ribosomal_S13_N);(Ribosomal_S27e)
1
130
144
132
146
1
505
100
18
98
(Ribosomal_S13_N);(Ribosomal_S7e)
1
121
135
128
142
1
177
100
19
95
(Ribosomal_S13_N);(Ribosomal_S8)
1
126
140
129
143
1
191
100
19
98
(Ribosomal_S14);(Ribosomal_S19)
1
122
149
143
170
1
155
100
22
85
(Ribosomal_S14);(S10_plectin)
1
116
130
119
133
1
289
100
17
97
(Ribosomal_S17);(Ribosomal_S8)
1
228
463
383
642
1
137
99
18
60
(Ribosomal_S17);(Ribosomal_S8)
2
75
89
383
642
1
131
100
20
20
(Ribosomal_S17);(Ribosomal_S8e)
1
99
112
132
146
1
127
100
21
75
(Ribosomal_S17_N);(Ribosomal_S8e)
1
129
143
130
144
1
273
100
18
99
(Ribosomal_S17e);(Ribosomal_S2)
1
121
135
123
137
1
639
100
19
98
(Ribosomal_S17e);(WD40)
1
112
126
114
128
1
135
100
19
98
(Ribosomal_S18);(Ribosomal_S21)
1
131
158
144
171
1
209
100
20
91
(Ribosomal_S18);(Ribosomal_S6)
1
261
502
268
526
1
866
100
13
97
(Ribosomal_S19);(Stm1_N)
1
25
35
25
39
1
331
100
26
100
(Ribosomal_S19e);(Ribosomal_S9)
1
123
137
130
144
1
199
99
19
95
(Ribosomal_S2);(Ribosomal_S21e)
1
123
137
124
138
1
1223
100
19
99
(Ribosomal_S2);(Ribosomal_S8)
1
97
317
128
359
1
260
100
8
76
(Ribosomal_S21e);(Ribosomal_S5)
1
121
135
122
136
1
222
100
19
99
(Ribosomal_S21e);(Ribosomal_S5_C)
1
124
138
124
138
1
400
100
19
100
(Ribosomal_S21e);(Ribosomal_S8)
1
119
133
124
138
1
256
100
20
96
(Ribosomal_S24e);(S4)
1
130
144
134
148
1
194
100
18
97
(Ribosomal_S24e);(S4)
2
124
138
134
148
1
183
100
19
93
(Ribosomal_S25);(Ribosomal_S7)
1
126
140
126
140
1
589
99
19
100
(Ribosomal_S26e);(Ribosomal_S28e)
1
73
79
109
123
1
141
100
18
67
(Ribosomal_S26e);(Ribosomal_S3Ae)
1
115
129
117
131
1
256
100
17
98
(Ribosomal_S28e);(Ribosomal_S7)
1
135
149
137
151
1
1007
100
17
99
(Ribosomal_S30);(Ribosomal_S4)
1
127
141
127
141
1
418
100
18
100
(Ribosomal_S30);(S4)
1
118
132
123
137
1
155
100
19
96
(Ribosomal_S3_C);(Ribosomal_S5)
1
118
143
352
619
1
140
100
15
34
(Ribosomal_S4);(RS4NT)
1
48
62
114
128
1
242
100
26
42
(Ribosomal_S4);(Ribosomal_S5_C)
1
204
447
392
664
1
145
100
22
52
(Ribosomal_S4);(Ribosomal_S5_C)
2
125
139
392
664
1
211
100
19
32
(Ribosomal_S4);(Ribosomal_S5_C)
3
26
40
392
664
1
121
100
30
7
(Ribosomal_S4);(Ribosomal_S6)
1
31
71
36
103
1
150
1
0
86
(Ribosomal_S4);(Ribosomal_S8)
1
50
50
120
134
1
124
100
14
42
(Ribosomal_S5_C);(Ribosomal_S8)
1
253
501
392
662
1
472
100
19
65
(Ribosomal_S5_C);(Ribosomal_S8)
2
126
140
392
662
1
340
100
19
32
(Ribosomal_S7);(Ribosomal_S9)
1
370
623
393
661
1
291
100
17
94
(Ribosomal_S7e);(Ribosomal_S8)
1
131
145
131
145
1
463
100
18
100
(Ribosomal_S9);(WD40)
1
118
132
127
141
1
264
100
19
93
(RuBisCO_large);(RuBisCO_large_N)
1
46
91
48
95
1
1561
99
95
96
(RuBisCO_large);(RuBisCO_large_N)
2
37
77
48
95
1
1134
99
97
77
(RuBisCO_large);(RuBisCO_small)
1
25
52
25
52
1
1345
100
94
100
(RuBisCO_large);(RuBisCO_small)
2
24
51
25
52
1
822
96
92
96
(RuBisCO_large_N);(RuBisCO_small)
1
25
52
25
52
1
346
96
88
100
(SKIP_SNW);(WD40)
1
28
28
29
29
1
258
100
14
97
(SNARE);(Synaptobrevin)
1
22
26
25
30
1
771
100
69
88
(SRP54);(SRP54_N)
1
41
57
45
61
1
815
100
98
91
(SSL_OB);(Stap_Strp_tox_C)
1
31
38
33
40
1
1173
97
97
94
(SecE);(SecY)
1
32
36
34
38
1
1301
94
58
94
(Semialdhyde_dh);(Semialdhyde_dhC)
1
38
72
38
73
1
905
100
100
100
(Sigma70_r1_2);(Sigma70_r2)
1
23
30
24
31
1
698
100
80
96
(Skp1);(Skp1_POZ)
1
29
41
30
43
1
134
100
98
97
(Skp1_POZ);(ubiquitin)
1
22
62
23
63
1
665
95
90
96
(Sod_Fe_C);(Sod_Fe_N)
1
77
156
77
157
1
263
95
93
100
(Sod_Fe_C);(Sod_Fe_N)
2
74
153
77
157
1
1172
100
97
96
(Spike_NTD);(Spike_rec_bind)
1
34
34
34
34
1
504
100
12
100
(Stap_Strp_tox_C);(Stap_Strp_toxin)
1
50
80
54
88
1
1110
99
94
93
(SusD_RagB);(SusD-like_3)
1
30
32
30
32
1
3006
100
100
100
(Synaptobrevin);(Syntaxin)
1
24
29
25
30
1
764
100
72
96
(TBP);(TFIIA)
1
21
22
22
23
1
533
100
18
95
(TBP);(TFIIA_gamma_C)
1
22
23
22
23
1
445
100
22
100
(TBP);(TFIIB)
1
29
31
29
31
1
257
100
39
100
(TBP);(TFIIB)
2
24
26
29
31
1
157
100
38
83
(TFIIA);(TFIIA_gamma_C)
1
20
20
23
24
1
1189
100
15
87
(TFIIA);(TFIIA_gamma_N)
1
23
24
23
24
1
1184
100
29
100
(TPP_enzyme_C);(TPP_enzyme_M)
1
54
161
54
163
1
684
100
100
100
(TPP_enzyme_C);(TPP_enzyme_N)
1
61
185
61
187
1
829
97
100
100
(TPP_enzyme_C);(TPP_enzyme_N)
2
61
185
61
187
1
949
100
100
100
(TPP_enzyme_M);(TPP_enzyme_N)
1
51
146
54
163
1
320
100
100
94
(TPP_enzyme_M);(TPP_enzyme_N)
2
51
153
54
163
1
295
99
100
94
(TPP_enzyme_M);(TPP_enzyme_N)
3
27
98
54
163
1
315
99
99
50
(TPR_1);(TPR_11)
1
28
35
41
49
1
214
100
97
68
(Terpene_synth);(Terpene_synth_C)
1
20
64
20
65
1
952
100
100
100
(TetR_C_6);(TetR_N)
1
21
28
23
32
1
449
100
100
91
(Thiolase_C);(Thiolase_N)
1
52
109
57
115
1
394
99
98
91
(Thiolase_C);(Thiolase_N)
2
52
105
57
115
1
2791
100
98
91
(Thrombin_light);(Trypsin)
1
125
414
126
425
1
1173
100
97
99
(Thrombin_light);(Trypsin)
2
27
247
126
425
1
205
0
0
21
(Thrombin_light);(Trypsin)
3
25
44
126
425
1
250
0
0
20
(Thrombin_light);(Trypsin)
4
24
38
126
425
1
268
3
13
19
(Topoisom_bac);(Toprim)
1
21
27
21
36
1
1525
100
100
100
(Toxin_R_bind_C);(Toxin_R_bind_N)
1
50
81
53
85
1
1185
100
98
94
(Transket_pyr);(Transketolase_C)
1
35
110
35
110
1
310
99
100
100
(Transket_pyr);(Transketolase_C)
2
29
91
35
110
1
1160
100
100
83
(Tubulin);(Tubulin_C)
1
125
137
139
246
1
1039
100
51
90
(Tubulin);(Tubulin_C)
2
119
208
139
246
1
355
99
71
86
(Tubulin);(Tubulin_C)
3
39
49
139
246
1
389
71
27
28
(UCR_14kD);(UcrQ)
1
27
59
27
60
1
448
100
88
100
(UCR_TM);(UCR_UQCRX_QCR9)
1
30
52
30
62
1
623
100
81
100
(UCR_TM);(UcrQ)
1
30
52
30
62
1
552
100
81
100
(UCR_hinge);(UcrQ)
1
27
58
27
60
1
246
100
88
100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_C)
1
26
41
26
41
1
471
100
100
100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_N)
1
26
41
26
41
1
786
100
100
100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_N)
2
24
38
26
41
1
264
97
100
92
(UDPG_MGDP_dh_C);(UDPG_MGDP_dh_N)
1
22
32
26
41
1
272
100
100
85
(V-set);(V-set_2)
1
61
88
70
97
1
763
98
90
87
(XPG_I);(XPG_N)
1
26
46
26
46
1
2083
100
98
100
(cNMP_binding);(HTH_Crp_2)
1
46
86
62
104
1
369
99
98
74
(eIF-1a);(Ribosom_S12_S23)
1
24
24
24
24
1
372
100
21
100
(eIF-6);(Ribosomal_L14)
1
20
20
24
24
1
704
100
35
83
(ig);(Ig_2)
1
21
24
28
32
1
362
100
100
75
(ketoacyl-synt);(Ketoacyl-synt_C)
1
72
133
75
136
1
551
95
95
96
(ketoacyl-synt);(Ketoacyl-synt_C)
2
72
133
75
136
1
2143
99
96
96
(peroxidase);(Peroxidase_ext)
1
21
71
21
71
1
2986
100
100
100
(tRNA_anti-codon);(tRNA-synt_2)
1
47
79
47
79
1
313
91
100
100
(tRNA_anti-codon);(tRNA-synt_2)
2
45
76
47
79
1
188
100
100
96
(ubiquitin);(UCH)
1
30
41
33
45
1
1097
95
95
91
(zf-C2H2);(zf-H2C2_2)
1
49
79
51
83
1
922
90
86
96
(zf-C2H2);(zf-H2C2_2)
2
20
33
51
83
1
202
6
15
39
(CSN8_PSD8_EIF3K);(TPR_2)
1
26
26
30
30
1
168
100
23
87
(DSS1_SEM1);(TPR_2)
1
20
20
23
23
1
184
100
0
87
(ANF_receptor);(SBP_bac_3)
1
21
21
25
25
1
138
100
0
84
(Helicase_C);(SNF2_N)
1
21
21
23
23
1
916
100
67
91
(Methyltransf_25);(PRMT5_C)
1
29
94
29
94
1
942
97
97
100
(Spermine_synt_N);(Spermine_synth)
1
21
55
21
55
1
980
100
100
100
(EF-hand_7);(EzrA)
1
23
33
23
33
1
721
97
52
100
(EF-hand_7);(EzrA)
2
23
33
23
33
1
781
97
52
100
(Asparaginase);(Asparaginase_C)
1
35
61
35
61
1
723
93
100
100
(Asparaginase);(Asparaginase_C)
2
35
61
35
61
1
700
100
100
100
(Asparaginase);(Asparaginase_C)
3
20
37
35
61
1
180
100
100
57
(TFIIF_alpha);(TFIIF_beta_N)
1
20
20
20
20
1
1433
100
10
100
(AAA);(AAA_lid_3)
1
130
153
161
184
1
150
99
65
81
(AAA);(AAA_lid_3)
2
116
120
161
184
1
174
97
40
72
(AAA);(AAA_lid_9)
1
27
28
37
38
1
361
82
11
73
(AAA);(AAA_lid_9)
2
25
26
37
38
1
155
100
50
68
(Big_8);(SdrG_C_C)
1
23
28
23
28
1
549
96
96
100
(ATP-synt_ab);(T3SS_ATPase_C)
1
63
87
96
151
1
238
95
75
66
(ATP-synt_ab);(T3SS_ATPase_C)
2
43
87
96
151
1
905
98
86
45
(TetR_C_24);(TetR_N)
1
30
31
30
31
1
506
100
100
100
(A2M);(A2M_BRD)
1
44
54
44
54
1
2048
94
94
100
(TetR_C_1);(TetR_N)
1
28
62
34
68
1
410
100
98
82
(ATP-synt_ab_C);(T3SS_ATPase_C)
1
45
65
57
77
1
235
98
83
79
(IRK);(IRK_C)
1
28
48
28
48
1
665
100
73
100
(IRK);(IRK_C)
2
24
43
28
48
1
351
98
70
86
(MitMem_reg);(Rpn9_C)
1
56
56
56
56
1
1017
98
23
100
(MitMem_reg);(RPN6_C_helix)
1
42
42
57
57
1
384
100
14
74
(MitMem_reg);(RPN6_C_helix)
2
38
38
57
57
1
505
97
37
67
(ATP-synt);(T3SS_ATPase_C)
1
45
61
51
67
1
368
100
77
88
(ATP-synt);(T3SS_ATPase_C)
2
29
40
51
67
1
178
100
92
57
(Peptidase_M1);(Peptidase_M1_N)
1
36
217
37
218
1
1344
100
100
97
(AAA_2);(AAA_lid_9)
1
23
23
29
30
1
216
100
30
79
(SDH_C);(Shikimate_dh_N)
1
31
54
31
54
1
763
98
98
100
(AAA_lid_3);(Vps4_C)
1
20
29
28
39
1
1654
100
83
71
(I-EGF_1);(PSI_integrin)
1
23
44
24
45
1
313
98
91
96
(A2M);(MG2)
1
44
54
44
54
1
635
94
94
100
(A2M);(MG3)
1
29
33
40
48
1
477
91
97
72
(A2M_BRD);(MG2)
1
33
41
34
42
1
433
100
98
97
(MG1);(MG2)
1
23
29
27
33
1
205
100
100
85
(MG2);(MG3)
1
29
35
35
42
1
156
100
100
83
(A2M_BRD);(MG4)
1
26
32
36
44
1
461
100
100
72
(A2M_BRD);(MG1)
1
27
33
29
35
1
649
100
100
93
(MG3);(MG4)
1
25
31
32
38
1
178
100
100
78
(A2M_recep);(MG3)
1
24
28
36
42
1
406
89
96
67
(RNA_polI_A14);(RPA43_OB)
1
27
28
27
28
1
261
100
64
100
(FeoB_Cyto);(FeoB_N)
1
21
29
21
29
1
1134
100
100
100
(Helicase_C);(RIG-I_C)
1
21
33
22
34
1
652
97
97
95
(MitMem_reg);(RPN5_C)
1
56
56
57
57
1
927
98
23
98
(AAA_lid_3);(RPN7)
1
26
26
51
51
1
146
100
31
51
(APG6_N);(Rpn3_C)
1
30
30
37
37
1
269
100
20
81
(JAB);(RPN5_C)
1
43
43
53
53
1
181
98
26
81
(Proteasome);(RPN6_N)
1
24
24
31
31
1
273
100
21
77
(AAA_lid_3);(Proteasome)
1
53
53
54
54
1
236
100
26
98
(APG6_N);(Prot_ATP_ID_OB)
1
51
51
51
51
1
393
100
27
100
(APG6_N);(HEAT_2)
1
37
37
43
43
1
373
100
16
86
(APG6_N);(RPN1_RPN2_N)
1
40
40
43
43
1
460
100
20
93
(DASH_Hsk3);(Prot_ATP_ID_OB)
1
24
24
24
24
1
447
100
29
100
(APG6_N);(MitMem_reg)
1
25
25
34
34
1
162
100
16
74