Protein Common Interface Database

Domain Clusters with M>=20,SeqId<90 and diff Pfam relation

Pfam Architecture	Cluster#	#CFs/Cluster	#Entries/Cluster	#CFs/Group	#Entries/Group	Minimum Seq Identity	Surface Area	In PDBBA(%)	In PISABA(%)	CFs Cluster/Group(%)
(Fe_dep_repr_C);(Fe_dep_repress)	1	27	64	27	64	14	625	100	97	100
(Formyl_trans_C);(Formyl_trans_N)	1	26	48	28	52	5	664	100	100	93
(RNA_polI_A14);(SHS2_Rpb7-N)	1	36	40	36	40	2	723	100	72	100
(IATP);(T3SS_ATPase_C)	1	24	26	24	27	20	430	100	27	100
(RNA_polI_A14);(RPA43_OB)	1	29	33	35	39	70	258	100	67	83
(NUC);(RuvC_1)	1	20	24	25	30	27	966	100	71	80
(ATP-synt_8);(Mt_ATP-synt_D)	1	22	22	25	25	56	280	100	23	88
(ATP-synt_A);(WRW)	1	25	25	25	25	80	470	100	24	100
(ATP-synt_8);(ATP-synt_A)	1	25	25	25	25	56	908	100	24	100
(HEAT_2);(ZapB)	1	23	23	23	23	2	296	100	26	100
(RPN1_RPN2_N);(ZapB)	1	22	22	23	23	2	382	100	27	96
(ATP-synt_A);(VBS)	1	27	27	27	27	51	945	100	89	100
(ATP-synt_E);(ATP-synt_G)	1	20	20	20	20	76	646	100	30	100
(ATP-synt_G);(WRW)	1	20	20	20	20	82	233	100	30	100
(ATP-synt_A);(Mit_proteolip)	1	20	20	20	20	80	288	100	30	100
(ATP-synt);(IATP)	1	24	26	24	27	25	289	100	27	100
(ATP-synt_ab_C);(IATP)	1	23	25	24	27	25	253	100	28	96
(HA2);(Helicase_C)	1	20	37	35	59	18	288	100	97	57
(HA2);(OB_NTP_bind)	1	34	57	34	58	11	1088	100	96	100
(Helicase_C);(OB_NTP_bind)	1	26	44	32	56	12	295	100	98	81
(Hormone_recep);(SRC-1)	1	23	57	25	60	17	457	96	100	92
(Hydrolase_6);(Hydrolase_like)	1	28	41	28	43	11	1204	100	100	100
(3HCDH);(3HCDH_N)	1	34	72	36	79	13	419	99	90	94
(CRPV_capsid);(Rhv)	1	27	27	28	28	7	1075	93	37	96
(Calici_coat);(CRPV_capsid)	1	29	30	29	30	12	2544	93	27	100
(Lig_chan);(SBP_bac_3)	1	23	43	23	48	5	772	100	74	100
(Lig_chan-Glu_bd);(SBP_bac_3)	1	24	49	24	54	14	2502	100	78	100
(Lig_chan-Glu_bd);(SBP_bac_3)	2	20	43	24	54	14	257	98	67	83
(MR_MLE_C);(MR_MLE_N)	1	167	287	167	288	1	1719	98	98	100
(MR_MLE_C);(MR_MLE_N)	2	92	163	167	288	3	319	80	89	55
(MR_MLE_C);(MR_MLE_N)	3	68	115	167	288	11	129	67	89	41
(Med11);(Med17)	1	20	20	20	20	11	1014	100	15	100
(Med11);(Med22)	1	21	21	21	21	11	1223	95	19	100
(Alpha-amylase);(DUF1939)	1	20	40	20	40	8	406	100	100	100
(ApbA);(ApbA_C)	1	20	23	20	23	13	859	100	100	100
(Bromo_TP);(TFIID_30kDa)	1	26	26	26	26	50	1373	100	15	100
(C2-set);(ig)	1	33	48	34	49	76	551	98	79	97
(CTP_synth_N);(GATase)	1	29	40	29	40	40	940	100	30	100
(CarD_CdnL_TRCF);(RNA_pol_Rpb2_1)	1	24	24	24	24	18	483	71	8	100
(Cbl_N);(Cbl_N2)	1	22	35	23	36	27	597	100	100	96
(Cbl_N);(Cbl_N3)	1	22	35	24	37	27	364	100	100	92
(Cbl_N2);(Cbl_N3)	1	22	35	24	38	42	665	100	100	92
(Creatinase_N);(Peptidase_M24)	1	21	33	24	38	7	490	100	100	88
(Creatinase_N);(Peptidase_M24)	2	20	30	24	38	5	536	100	100	83
(Cyclin_C);(Cyclin_N)	1	28	82	41	169	6	1381	100	99	68
(DNA_gyraseB_C);(Toprim)	1	21	35	23	45	34	1281	100	91	91
(DXP_redisom_C);(DXPR_C)	1	24	75	24	75	26	1568	100	100	100
(DXP_redisom_C);(DXP_reductoisom)	1	24	75	24	75	22	588	100	100	100
(DXP_reductoisom);(DXPR_C)	1	24	75	24	75	22	923	100	100	100
(Dynamin_M);(Dynamin_N)	1	34	41	34	42	1	1440	100	85	100
(Dynamin_M);(GED)	1	22	24	22	24	6	2980	100	79	100
(FGGY_C);(FGGY_N)	1	40	86	40	87	8	1886	99	98	100
(PDZ_2);(Trypsin_2)	1	24	40	36	67	16	264	100	95	67
(RNase_PH);(RNase_PH_C)	1	51	69	51	70	3	499	100	87	100
(Ras);(Xpo1)	1	22	82	23	83	12	436	98	66	96
(RbpA);(Sigma70_r1_2)	1	21	25	21	26	41	485	100	36	100
(RbpA);(Sigma70_r2)	1	21	25	21	26	77	316	100	36	100
(Ribosomal_L11);(Ribosomal_L37)	1	23	24	23	24	10	982	100	12	100
(SNARE);(Synaptobrevin)	1	27	30	27	31	25	682	97	70	100
(SSL_OB);(Stap_Strp_tox_C)	1	34	39	36	41	11	1128	97	97	94
(Stap_Strp_tox_C);(Stap_Strp_toxin)	1	51	77	56	86	6	1150	99	94	91
(TFIIA);(TFIIA_gamma_C)	1	25	31	28	34	10	1129	100	32	89
(TFIIA);(TFIIA_gamma_N)	1	28	34	28	34	9	1167	100	38	100
(Transket_pyr);(Transketolase_N)	1	20	65	20	70	22	875	98	100	100
(Transket_pyr);(Transketolase_N)	2	20	65	20	70	22	1610	100	100	100
(Transketolase_C);(Transketolase_N)	1	20	65	20	70	8	247	98	100	100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_C)	1	27	43	27	43	12	472	100	100	100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_N)	1	27	43	27	43	19	788	100	100	100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_N)	2	25	40	27	43	20	262	98	100	93
(UDPG_MGDP_dh_C);(UDPG_MGDP_dh_N)	1	24	34	27	43	13	275	100	100	89
(XPG_I);(XPG_N)	1	30	49	30	51	16	2084	100	96	100
(peroxidase);(Peroxidase_ext)	1	23	73	23	73	28	2975	100	100	100
(Secretin);(Secretin_N)	1	22	22	23	23	12	469	100	27	96
(Nrap_D4);(Ribosomal_S3Ae)	1	23	23	24	24	20	503	100	0	96
(Nop14);(Ribosom_S12_S23)	1	25	25	27	27	25	499	100	4	93
(Nop14);(RIBIOP_C)	1	27	27	29	29	25	413	70	4	93
(Utp14);(WD40)	1	25	25	27	27	18	431	100	4	93
(Utp14);(WD40)	2	25	25	27	27	26	341	36	0	93
(Utp14);(WD40)	3	22	22	27	27	23	164	100	5	81
(Sof1);(Utp14)	1	29	29	29	29	26	664	100	3	100
(TPR_14);(Utp14)	1	25	25	26	26	24	548	100	4	96
(U3_assoc_6);(Utp14)	1	20	20	28	28	76	160	100	0	71
(BING4CT);(Utp14)	1	26	26	29	29	26	241	100	4	90
(Ribosomal_S7e);(Utp14)	1	23	23	26	26	24	284	100	4	88
(NOP5NT);(Utp14)	1	25	25	27	27	26	190	100	4	93
(Big_8);(SdrG_C_C)	1	26	30	26	30	11	554	97	97	100
(ATP-grasp);(PurK_C)	1	20	30	20	32	11	646	100	100	100
(TetR_C_1);(TetR_N)	1	29	75	33	81	9	441	100	99	88
(FeoB_Cyto);(FeoB_N)	1	21	31	21	31	10	1122	100	100	100
(GramPos_pilinBB);(SpaA)	1	21	24	21	24	8	271	100	100	100
(RIG-I_C);(RIG-I_C-RD)	1	22	31	23	37	23	577	97	81	96
(Helicase_C);(RIG-I_C)	1	29	40	30	44	26	655	100	88	97
(MMPL);(Sterol-sensing)	1	23	23	24	24	9	1634	100	22	96
(Nop14);(RTC)	1	20	20	20	20	25	598	100	5	100
(EMG1);(Nop14)	1	25	25	25	25	25	883	100	4	100
(EMG1);(Nop14)	2	21	21	25	25	25	173	100	5	84
(Brix);(Nop14)	1	20	20	20	20	25	473	100	5	100
(CBF);(Nop14)	1	26	26	26	26	25	1414	100	4	100
(Bromo_TP);(WD40)	1	25	25	25	25	15	117	100	12	100
(TFIID_30kDa);(WD40)	1	25	25	25	25	41	162	100	12	100
(Bromo_TP);(TFIID-31kDa)	1	24	24	25	25	78	315	100	12	96
(TFIID_30kDa);(TFIID-18kDa)	1	20	20	20	20	67	247	100	15	100
(Prp19);(U-box)	1	24	24	26	26	40	279	100	8	92
(Ge1_WD40);(Ribosomal_S4)	1	20	20	20	20	72	624	100	0	100
(1-cysPrx_C);(AhpC-TSA)	1	64	125	64	125	10	258	99	98	100
(2Fe-2S_thioredx);(Complex1_51K)	1	157	177	160	180	17	1251	100	31	98
(2Fe-2S_thioredx);(NADH_4Fe-4S)	1	152	172	158	178	17	341	88	32	96
(2Fe-2S_thioredx);(SLBB)	1	155	175	157	177	14	236	89	31	99
(2OG-FeII_Oxy);(DIOX_N)	1	37	135	37	135	10	1801	100	96	100
(40S_SA_C);(Ribosomal_S17e)	1	183	183	193	193	20	191	78	6	95
(7tm_1);(Cytochrom_B562)	1	22	44	37	70	12	415	93	86	59
(7tm_1);(G-alpha)	1	265	265	267	267	11	495	63	5	99
(7tm_1);(Phage_lysozyme)	1	22	38	49	87	17	813	100	95	45
(7tm_1);(WD40)	1	33	33	217	217	29	128	67	12	15
(A2M);(A2M_recep)	1	38	43	66	75	33	211	100	88	58
(A2M);(A2M_recep)	2	29	33	66	75	17	495	97	82	44
(AAA);(AAA_2)	1	51	52	55	56	35	251	96	33	93
(AAA);(AAA_assoc_2)	1	30	30	30	30	20	181	100	10	100
(AAA);(AAA_assoc_2)	2	28	28	30	30	65	308	100	4	93
(AAA);(Lon_C)	1	28	28	29	29	52	305	100	39	97
(AAA);(Prot_ATP_ID_OB)	1	46	46	71	71	14	194	85	17	65
(AAA);(Rep_fac_C)	1	34	34	34	34	15	284	100	18	100
(AAA);(Vps4_C)	1	63	71	71	83	10	434	100	31	89
(AAA_16);(ORC3_N)	1	28	28	28	28	9	482	82	4	100
(AAA_16);(ORC4_C)	1	29	29	29	29	11	613	76	7	100
(AAA_2);(ClpB_D2-small)	1	90	104	100	115	8	349	83	33	90
(AAA_2);(ClpB_D2-small)	2	77	87	100	115	15	211	100	48	77
(AAA_6);(AAA_7)	1	21	23	22	25	16	157	87	48	95
(AAA_6);(DHC_N2)	1	20	22	21	24	17	905	91	50	95
(AAA_7);(AAA_8)	1	20	22	21	24	16	609	91	50	95
(AAA_8);(AAA_9)	1	20	22	21	24	21	759	91	50	95
(AAA_8);(MT)	1	20	22	21	24	4	897	91	50	95
(AAA_9);(MT)	1	21	23	21	24	4	1047	91	48	100
(AAA_assoc_2);(DNA_pol3_delta2)	1	31	31	31	31	89	535	100	13	100
(AAA_assoc_2);(Rep_fac_C)	1	28	28	28	28	55	1245	100	4	100
(ABC_membrane);(ABC_tran)	1	193	237	193	240	6	523	83	46	100
(ABC_tran);(ABC2_membrane)	1	44	47	44	47	9	919	83	30	100
(ABC_tran);(BCA_ABC_TP_C)	1	22	27	22	27	8	244	96	96	100
(ABC_tran);(BPD_transp_1)	1	22	36	24	38	11	810	100	83	92
(ACP_syn_III);(ACP_syn_III_C)	1	53	107	56	111	10	1261	100	99	95
(ADH_N);(ADH_N_assoc)	1	25	33	25	33	4	838	100	97	100
(ADH_N);(ADH_zinc_N)	1	153	315	154	316	1	608	100	97	99
(ADH_N);(ADH_zinc_N)	2	122	276	154	316	4	253	96	95	79
(ADH_N);(ADH_zinc_N_2)	1	31	39	31	39	6	938	97	92	100
(ADH_N_2);(ADH_zinc_N)	1	20	38	23	44	9	306	100	100	87
(ADK);(ADK_lid)	1	40	80	40	80	13	538	99	98	100
(AIRS);(AIRS_C)	1	35	56	36	59	2	978	98	98	97
(AMP-binding);(AMP-binding_C)	1	123	207	127	211	6	626	100	96	97
(ANF_receptor);(Lig_chan-Glu_bd)	1	54	55	109	127	33	233	100	5	50
(ANF_receptor);(Lig_chan-Glu_bd)	2	31	44	109	127	22	254	100	41	28
(ANF_receptor);(NCD3G)	1	38	41	40	43	29	387	100	27	95
(ATP-grasp_2);(Ligase_CoA)	1	29	59	29	59	16	300	95	76	100
(ATP-gua_Ptrans);(ATP-gua_PtransN)	1	28	52	29	53	23	889	96	94	97
(ATP-synt);(ATP-synt_C)	1	108	111	170	174	15	156	100	54	64
(ATP-synt);(ATP-synt_DE)	1	23	23	46	47	33	1121	100	13	50
(ATP-synt);(ATP-synt_DE_N)	1	215	230	215	230	6	813	100	43	100
(ATP-synt);(ATP-synt_Eps)	1	146	158	146	158	17	856	100	54	100
(ATP-synt);(ATP-synt_ab)	1	173	203	213	243	17	237	100	52	81
(ATP-synt);(ATP-synt_ab)	2	171	198	213	243	17	287	100	51	80
(ATP-synt);(ATP-synt_ab_C)	1	170	200	212	242	18	278	100	52	80
(ATP-synt);(ATP-synt_ab_C)	2	32	34	212	242	23	138	100	47	15
(ATP-synt);(ATP-synt_ab_C)	3	25	29	212	242	27	126	100	72	12
(ATP-synt_A);(ATP-synt_C)	1	121	122	153	154	17	374	100	33	79
(ATP-synt_A);(Mt_ATP-synt_B)	1	71	71	73	73	20	446	100	18	97
(ATP-synt_C);(ATP-synt_DE_N)	1	145	149	189	193	6	205	99	41	77
(ATP-synt_C);(ATP-synt_Eps)	1	33	33	90	90	38	117	100	91	37
(ATP-synt_C);(V_ATPase_I)	1	48	48	56	56	9	424	100	10	86
(ATP-synt_C);(vATP-synt_AC39)	1	51	51	61	61	9	174	100	10	84
(ATP-synt_D);(ATP-synt_F)	1	81	86	82	89	14	1480	100	17	99
(ATP-synt_D);(vATP-synt_AC39)	1	49	49	51	51	14	978	100	10	96
(ATP-synt_DE);(ATP-synt_Eps)	1	43	52	52	62	2	316	100	50	83
(ATP-synt_DE_N);(ATP-synt_Eps)	1	107	118	144	155	21	373	100	66	74
(ATP-synt_F);(vATP-synt_AC39)	1	24	24	40	40	15	193	100	17	60
(ATP-synt_ab);(ATP-synt_D)	1	69	74	82	89	25	258	100	16	84
(ATP-synt_ab);(ATP-synt_ab_C)	1	84	106	192	224	20	703	100	42	44
(ATP-synt_ab);(ATP-synt_ab_C)	2	64	86	192	224	38	165	99	43	33
(ATP-synt_ab);(ATP-synt_ab_N)	1	136	153	294	350	7	124	96	59	46
(ATP-synt_ab);(ATP-synt_ab_N)	2	111	146	294	350	5	384	99	47	38
(ATP-synt_ab);(ATP-synt_ab_Xtn)	1	75	85	89	117	24	129	99	29	84
(ATP-synt_ab);(ATP-synt_ab_Xtn)	2	50	73	89	117	38	1464	100	47	56
(ATP-synt_ab);(vATP-synt_E)	1	57	57	74	74	16	341	100	7	77
(ATP-synt_ab_C);(ATP-synt_DE)	1	20	20	28	31	36	256	100	10	71
(ATP-synt_ab_N);(ATP-synt_ab_Xtn)	1	44	53	61	87	38	575	100	34	72
(ATP-synt_ab_N);(OSCP)	1	127	128	191	192	17	336	100	27	66
(ATP-synt_ab_N);(OSCP)	2	102	102	191	192	8	206	96	42	53
(ATP-synt_ab_N);(OSCP)	3	26	26	191	192	16	195	100	19	14
(ATP-synt_ab_N);(OSCP)	4	21	21	191	192	17	121	100	14	11
(ATP-synt_ab_N);(vATP-synt_E)	1	63	63	75	75	16	155	100	6	84
(ATP1G1_PLM_MAT8);(Cation_ATPase_C)	1	25	57	25	60	34	777	100	67	100
(ATP1G1_PLM_MAT8);(Na_K-ATPase)	1	24	36	24	58	35	328	100	47	100
(Actin);(Gelsolin)	1	26	56	27	57	44	794	100	98	96
(Actin);(Myosin_head)	1	63	63	63	63	34	867	95	37	100
(Acyl-CoA_dh_1);(Acyl-CoA_dh_M)	1	87	131	89	133	8	514	91	96	98
(Acyl-CoA_dh_1);(Acyl-CoA_dh_M)	2	86	128	89	133	6	563	96	96	97
(Acyl-CoA_dh_1);(Acyl-CoA_dh_N)	1	74	115	74	115	7	1078	96	96	100
(Acyl-CoA_dh_M);(Acyl-CoA_dh_N)	1	83	134	84	137	4	905	96	96	99
(Acyl_transf_1);(KAsynt_C_assoc)	1	34	46	34	46	5	491	96	70	100
(Acyl_transf_1);(MaoC_dehydratas)	1	20	20	21	23	81	163	100	45	95
(Adaptin_N);(Clat_adaptor_s)	1	40	43	45	48	6	1691	100	53	89
(AdoHcyase);(AdoHcyase_NAD)	1	38	65	38	66	27	744	91	92	100
(AdoHcyase);(AdoHcyase_NAD)	2	33	53	38	66	39	1037	87	87	87
(AlaDh_PNT_C);(AlaDh_PNT_N)	1	25	36	32	52	11	2215	92	89	78
(AlaDh_PNT_C);(AlaDh_PNT_N)	2	25	42	32	52	23	274	95	98	78
(Ala_racemase_C);(Ala_racemase_N)	1	36	66	36	66	18	727	100	100	100
(Ala_racemase_C);(Ala_racemase_N)	2	35	65	36	66	18	899	100	97	97
(Ald_Xan_dh_C);(Ald_Xan_dh_C2)	1	21	82	22	83	15	2128	99	99	95
(Ald_Xan_dh_C);(Fer2)	1	21	67	21	81	15	304	99	99	100
(Ald_Xan_dh_C);(Fer2_2)	1	22	69	22	83	15	260	99	99	100
(Ald_Xan_dh_C2);(Fer2)	1	21	67	21	72	17	282	99	99	100
(Ald_Xan_dh_C2);(Fer2_2)	1	22	69	22	83	17	1013	99	99	100
(Alpha-amylase);(Alpha-amylase_C)	1	39	167	47	191	2	827	100	100	83
(Alpha-amylase);(CBM_48)	1	37	65	37	95	10	945	95	92	100
(Alpha-amylase);(DUF3459)	1	31	46	33	56	6	1354	100	72	94
(Alpha-amylase);(Malt_amylase_C)	1	51	152	51	152	4	887	100	99	100
(Alpha_E1_glycop);(Alpha_E2_glycop)	1	29	29	54	56	33	2938	79	0	54
(Alpha_E1_glycop);(Alpha_E2_glycop)	2	21	23	54	56	34	1194	91	30	39
(Alpha_E2_glycop);(Peptidase_S3)	1	27	27	32	32	25	490	78	0	84
(Amidohydro_1);(Urease_alpha)	1	25	54	27	99	9	1266	100	98	93
(Ank);(Ank_2)	1	156	174	173	212	3	643	98	75	90
(Ank_2);(Ank_4)	1	96	106	108	122	4	667	99	43	89
(Ank_2);(Ank_5)	1	51	70	60	79	12	989	100	84	85
(Anoct_dimer);(Anoctamin)	1	38	39	38	39	3	2058	82	59	100
(ArgoMid);(Piwi)	1	21	59	21	59	4	1675	98	98	100
(Arm);(Arm_3)	1	70	152	77	167	20	768	100	91	91
(Arm);(IBB)	1	54	120	73	157	15	513	100	92	74
(Arm);(IBB)	2	34	106	73	157	12	211	0	0	47
(Arrestin_C);(Arrestin_N)	1	22	38	23	41	29	1447	97	76	96
(BBE);(FAD_binding_4)	1	36	66	36	71	18	776	98	95	100
(BCAS2);(Prp19)	1	28	28	30	30	15	528	89	11	93
(BCAS2);(Prp19)	2	24	24	30	30	15	371	88	8	80
(Bcl-2);(BH4)	1	77	129	84	137	6	869	95	84	92
(Bcl-2);(BH4)	2	23	34	84	137	18	183	3	12	27
(Bcl-2);(Bclx_interact)	1	32	44	33	45	4	905	95	95	97
(Biotin_carb_C);(Biotin_carb_N)	1	43	87	45	90	19	557	94	94	96
(Biotin_carb_C);(Biotin_carb_N)	2	33	74	45	90	19	369	66	39	73
(Biotin_carb_C);(CPSase_L_D2)	1	44	87	45	90	19	1148	94	94	98
(Biotin_carb_C);(CPSase_L_D2)	2	27	67	45	90	23	199	63	33	60
(Biotin_carb_N);(CPSase_L_D2)	1	44	89	45	90	17	957	94	94	98
(Brix);(Ribosomal_S9)	1	30	30	36	36	48	312	100	3	83
(Bromodomain);(DUF902)	1	34	104	34	105	5	190	100	92	100
(C1-set);(DUF1968)	1	286	468	293	517	2	1206	97	90	98
(C1-set);(MHC_I)	1	601	1122	638	1273	6	695	95	91	94
(C1-set);(MHC_I)	2	210	344	638	1273	14	171	95	96	33
(C1-set);(MHC_I)	3	127	218	638	1273	18	263	0	3	20
(C1-set);(MHC_I)	4	43	124	638	1273	70	521	0	0	7
(C1-set);(MHC_I)	5	41	120	638	1273	70	327	0	0	6
(C1-set);(MHC_I)	6	38	75	638	1273	13	138	0	3	6
(C1-set);(MHC_I)	7	34	191	638	1273	21	160	1	0	5
(C1-set);(MHC_I)	8	34	182	638	1273	20	186	0	0	5
(C1-set);(MHC_I)	9	34	84	638	1273	19	246	0	0	5
(C1-set);(MHC_I)	10	34	37	638	1273	23	390	97	95	5
(C1-set);(MHC_I)	11	33	96	638	1273	20	253	0	0	5
(C1-set);(MHC_I)	12	27	62	638	1273	68	325	0	5	4
(C1-set);(MHC_I)	13	22	33	638	1273	41	236	0	3	3
(C1-set);(MHC_II_alpha)	1	162	221	164	226	18	302	96	95	99
(C1-set);(MHC_II_alpha)	2	126	165	164	226	18	508	100	96	77
(C1-set);(MHC_II_beta)	1	162	221	164	226	10	228	97	95	99
(C1-set);(MHC_II_beta)	2	24	41	164	226	28	291	0	0	15
(C1-set);(MHC_I_3)	1	49	137	49	157	35	566	97	95	100
(C1-set);(MHC_I_3)	2	27	46	49	157	37	205	96	91	55
(C1-set);(V-set)	1	2389	3110	3492	4657	2	180	92	85	68
(C1-set);(V-set)	2	2310	2899	3492	4657	3	255	91	83	66
(C1-set);(V-set)	3	86	102	3492	4657	1	160	0	1	2
(C1-set);(V-set)	4	70	86	3492	4657	18	135	0	3	2
(C1-set);(V-set)	5	69	92	3492	4657	17	142	2	10	2
(C1-set);(V-set)	6	62	73	3492	4657	7	280	8	37	2
(C1-set);(V-set)	7	56	65	3492	4657	20	225	3	8	2
(C1-set);(V-set)	8	54	65	3492	4657	7	162	0	5	2
(C1-set);(V-set)	9	53	65	3492	4657	15	182	0	2	2
(C1-set);(V-set)	10	52	62	3492	4657	6	147	2	10	1
(C1-set);(V-set)	11	51	61	3492	4657	10	168	7	0	1
(C1-set);(V-set)	12	44	53	3492	4657	5	150	23	21	1
(C1-set);(V-set)	13	39	46	3492	4657	35	114	0	4	1
(C1-set);(V-set)	15	37	50	3492	4657	3	174	0	0	1
(C1-set);(V-set)	16	37	40	3492	4657	17	200	0	8	1
(C1-set);(V-set)	17	36	42	3492	4657	17	166	0	0	1
(C1-set);(V-set)	18	34	45	3492	4657	17	140	0	0	1
(C1-set);(V-set)	19	34	47	3492	4657	5	206	0	0	1
(C1-set);(V-set)	20	34	45	3492	4657	12	225	0	2	1
(C1-set);(V-set)	21	34	39	3492	4657	3	159	0	3	1
(C1-set);(V-set)	22	33	47	3492	4657	2	184	0	0	1
(C1-set);(V-set)	23	33	36	3492	4657	16	157	0	0	1
(C1-set);(V-set)	24	32	36	3492	4657	6	154	0	3	1
(C1-set);(V-set)	25	31	36	3492	4657	12	211	3	0	1
(C1-set);(V-set)	26	30	33	3492	4657	6	145	0	0	1
(C1-set);(V-set)	27	29	42	3492	4657	3	169	0	0	1
(C1-set);(V-set)	28	29	40	3492	4657	6	191	5	2	1
(C1-set);(V-set)	29	28	47	3492	4657	15	270	0	0	1
(C1-set);(V-set)	30	28	45	3492	4657	6	131	0	0	1
(C1-set);(V-set)	31	28	31	3492	4657	21	349	42	0	1
(C1-set);(V-set)	32	28	32	3492	4657	16	347	0	3	1
(C1-set);(V-set)	33	28	34	3492	4657	15	193	0	0	1
(C1-set);(V-set)	34	27	30	3492	4657	18	140	0	3	1
(C1-set);(V-set)	35	27	33	3492	4657	17	136	0	0	1
(C1-set);(V-set)	36	26	44	3492	4657	20	197	0	0	1
(C1-set);(V-set)	37	26	30	3492	4657	20	191	0	3	1
(C1-set);(V-set)	38	25	26	3492	4657	20	162	4	4	1
(C1-set);(V-set)	39	25	29	3492	4657	14	197	0	7	1
(C1-set);(V-set)	40	25	26	3492	4657	19	158	0	0	1
(C1-set);(V-set)	41	25	26	3492	4657	19	139	4	12	1
(C1-set);(V-set)	42	24	34	3492	4657	15	158	0	0	1
(C1-set);(V-set)	43	24	30	3492	4657	7	287	0	0	1
(C1-set);(V-set)	44	24	29	3492	4657	5	204	0	3	1
(C1-set);(V-set)	45	23	35	3492	4657	18	156	0	6	1
(C1-set);(V-set)	46	23	27	3492	4657	5	200	4	0	1
(C1-set);(V-set)	47	23	23	3492	4657	5	138	0	4	1
(C1-set);(V-set)	48	22	32	3492	4657	13	156	0	0	1
(C1-set);(V-set)	49	22	34	3492	4657	17	193	0	0	1
(C1-set);(V-set)	50	22	33	3492	4657	6	190	0	0	1
(C1-set);(V-set)	51	22	26	3492	4657	18	143	4	15	1
(C1-set);(V-set)	52	22	27	3492	4657	16	139	0	4	1
(C1-set);(V-set)	53	21	25	3492	4657	18	161	0	0	1
(C1-set);(V-set)	54	21	27	3492	4657	16	217	0	4	1
(C1-set);(V-set)	55	21	28	3492	4657	2	126	86	82	1
(C1-set);(V-set)	56	21	23	3492	4657	15	171	0	4	1
(C1-set);(V-set)	57	21	21	3492	4657	16	188	5	10	1
(C1-set);(V-set)	58	20	34	3492	4657	17	153	3	0	1
(C1-set);(V-set)	59	20	25	3492	4657	17	160	0	0	1
(C1-set);(V-set)	60	20	24	3492	4657	12	174	0	0	1
(C1-set);(V-set)	61	20	22	3492	4657	48	486	14	0	1
(C1-set);(V-set)	62	20	23	3492	4657	15	182	0	4	1
(C1-set);(V-set_2)	1	201	220	256	289	11	164	96	89	79
(C2-set_2);(V-set)	1	30	35	48	56	9	236	97	91	62
(CAF1C_H4-bd);(WD40)	1	26	37	26	37	35	1146	92	89	100
(CBS);(IMPDH)	1	42	51	47	62	11	427	100	59	89
(CCP_MauG);(Cytochrom_C)	1	21	26	22	32	24	1144	100	100	95
(CDC45);(MCM_N)	1	22	22	22	22	15	554	100	41	100
(CDC45);(MCM_N)	2	21	21	22	22	21	362	100	38	95
(CDC45);(Sld5)	1	22	22	22	22	21	255	100	41	100
(CDC48_2);(CDC48_N)	1	76	83	79	88	2	580	99	43	96
(CHCH);(Ribosomal_S11)	1	32	33	37	38	60	176	100	0	86
(CHCH);(Ribosomal_S7)	1	43	44	43	44	21	663	100	5	100
(COX1);(COX2)	1	68	158	68	171	15	1293	98	70	100
(COX1);(COX2_TM)	1	59	119	60	133	10	2087	100	63	98
(COX1);(COX3)	1	56	106	56	119	22	1954	100	58	100
(COX1);(COX4)	1	28	75	28	88	15	960	100	64	100
(COX1);(COX5B)	1	30	77	31	91	30	361	100	57	97
(COX1);(COX6A)	1	23	70	25	85	35	361	99	59	92
(COX1);(COX6B)	1	20	67	25	85	35	140	100	60	80
(COX1);(COX7C)	1	30	77	30	90	4	983	100	58	100
(COX1);(COX7a)	1	27	74	30	90	20	203	100	64	90
(COX2);(COX4)	1	25	72	28	88	16	532	100	62	89
(COX2);(COX6B)	1	28	75	28	88	34	685	100	55	100
(COX2);(COX6C)	1	25	72	26	86	16	454	99	60	96
(COX2_TM);(COX4)	1	25	72	27	87	16	382	100	62	93
(COX2_TM);(COX5A)	1	28	75	28	88	28	282	100	57	100
(COX2_TM);(COX6C)	1	28	75	28	88	16	910	100	60	100
(COX3);(COX5B)	1	30	77	30	90	30	847	100	60	100
(COX3);(COX6A)	1	26	73	28	88	34	1574	99	59	93
(COX3);(COX6B)	1	27	74	28	88	34	249	100	55	96
(COX3);(COX7a)	1	30	77	30	90	20	1300	100	60	100
(COX4);(COX5A)	1	28	75	28	88	15	1188	100	60	100
(COX4);(COX6C)	1	25	72	27	87	15	375	100	61	93
(COX4);(COX7B)	1	20	67	20	80	79	1426	100	61	100
(COX5A);(COX5B)	1	25	72	25	85	35	185	100	58	100
(COX5A);(COX6C)	1	28	75	28	88	16	579	100	56	100
(COX5B);(COX7a)	1	26	73	27	87	20	166	100	59	96
(COX6A);(COX6B)	1	22	69	25	85	35	207	99	52	88
(COX7C);(COX8)	1	20	67	20	80	42	700	100	61	100
(CPSF_A);(MMS1_N)	1	59	79	66	90	11	1169	100	72	89
(CPSF_A);(WD40)	1	32	34	33	36	12	195	100	62	97
(CR6_interact);(MRP-L51)	1	59	64	59	64	74	427	100	14	100
(CR6_interact);(Ribosomal_L33)	1	58	63	58	63	42	475	100	14	100
(CR6_interact);(Ribosomal_L4)	1	58	63	58	63	74	423	100	14	100
(CRAL_TRIO);(CRAL_TRIO_N)	1	21	35	21	35	7	435	89	89	100
(CSN8_PSD8_EIF3K);(PCI)	1	81	82	81	82	13	981	100	22	100
(Cadherin);(Cadherin_2)	1	32	36	32	36	19	175	100	100	100
(Calici_coat);(Calici_coat_C)	1	82	167	84	175	1	3596	98	90	98
(Calici_coat);(Calici_coat_C)	2	77	166	84	175	1	235	92	89	92
(Calici_coat);(Rhv)	1	25	25	47	62	4	1106	92	28	53
(Catalase);(Catalase-rel)	1	44	142	44	142	7	1333	99	97	100
(Cation_ATPase_C);(E1-E2_ATPase)	1	73	106	75	141	9	778	100	65	97
(Cation_ATPase_C);(Hydrolase)	1	45	80	54	115	13	221	100	78	83
(Cation_ATPase_C);(Na_K-ATPase)	1	40	80	41	85	28	1835	100	69	98
(Cation_ATPase_N);(E1-E2_ATPase)	1	91	124	96	184	10	1729	100	55	95
(Cdc6_C);(ORC4_C)	1	27	27	27	27	7	737	67	7	100
(Chal_sti_synt_C);(Chal_sti_synt_N)	1	63	116	63	116	2	1710	100	97	100
(Chal_sti_synt_C);(Chal_sti_synt_N)	2	32	68	63	116	19	810	96	94	51
(Chloroa_b-bind);(PSI_PSAK)	1	27	29	36	42	30	350	100	14	75
(Chloroa_b-bind);(PSI_PsaF)	1	34	37	42	48	43	343	100	16	81
(Chloroa_b-bind);(PSI_PsaJ)	1	34	35	41	47	47	146	100	11	83
(Chloroa_b-bind);(PsaA_PsaB)	1	35	38	42	48	23	183	100	16	83
(Complex1_30kDa);(Complex1_49kDa)	1	134	142	135	143	12	1303	100	22	99
(Complex1_30kDa);(Oxidored_q6)	1	160	166	162	170	12	392	99	19	99
(Complex1_49kDa);(Fer4_7)	1	150	156	156	164	25	453	100	20	96
(Complex1_49kDa);(NADH-G_4Fe-4S_3)	1	145	153	145	153	21	792	100	21	100
(Complex1_49kDa);(NADHdh)	1	138	143	144	149	16	808	100	17	96
(Complex1_49kDa);(Oxidored_q6)	1	158	164	160	168	25	561	100	19	99
(Complex1_51K);(Fer2_4)	1	95	95	149	157	24	142	100	23	64
(Complex1_51K);(Molybdopterin)	1	27	27	32	40	47	284	100	15	84
(Cu-oxidase);(Cu-oxidase_2)	1	80	199	80	231	1	910	100	99	100
(Cu-oxidase);(Cu-oxidase_3)	1	106	392	107	427	1	1143	100	98	99
(Cu-oxidase_2);(Cu-oxidase_3)	1	106	262	106	296	6	993	100	97	100
(Cu_amine_oxid);(Cu_amine_oxidN2)	1	21	146	21	146	8	1124	98	99	100
(Cwf_Cwc_15);(PROCN)	1	36	36	37	37	5	967	92	11	97
(Cwf_Cwc_15);(SKIP_SNW)	1	31	31	32	32	5	278	90	6	97
(Cwf_Cwc_15);(WD40)	1	35	35	37	37	5	286	91	9	95
(Cyclin_N);(Pkinase)	1	66	207	70	231	7	1229	100	91	94
(Cytochrom_B559);(Photo_RC)	1	47	102	47	102	58	358	100	33	100
(Cytochrom_B559);(PsbJ)	1	34	87	35	90	25	346	100	20	97
(Cytochrom_B559);(PsbJ)	2	20	70	35	90	26	389	100	23	57
(Cytochrom_B559a);(Photo_RC)	1	46	100	46	101	44	1134	100	32	100
(Cytochrom_B559a);(Photo_RC)	2	46	100	46	101	44	255	100	31	100
(Cytochrom_B_C);(Cytochrome_B)	1	21	29	23	39	28	1811	100	62	91
(Cytochrom_B_C);(Rieske)	1	71	102	79	121	11	506	86	55	90
(Cytochrom_B_C);(UCR_14kD)	1	54	85	54	93	25	398	100	62	100
(Cytochrom_B_C);(UcrQ)	1	52	83	52	90	20	681	100	64	100
(Cytochrom_C1);(Cytochrome_B)	1	60	98	65	110	32	542	100	64	92
(Cytochrom_C1);(UCR_14kD)	1	31	68	50	88	37	147	100	84	62
(Cytochrom_C1);(UCR_TM)	1	44	71	46	81	24	507	100	68	96
(Cytochrom_C1);(UCR_UQCRX_QCR9)	1	51	88	54	92	32	851	100	67	94
(Cytochrom_C1);(UCR_hinge)	1	55	86	55	93	25	765	100	62	100
(Cytochrom_C1);(UcrQ)	1	52	89	52	91	20	366	100	66	100
(Cytochrom_C550);(PSII)	1	25	79	25	80	50	930	100	43	100
(Cytochrom_C550);(Photo_RC)	1	25	79	25	80	58	481	100	43	100
(Cytochrom_C550);(PsbU)	1	23	77	23	78	32	634	100	26	100
(Cytochrome_B);(Rieske)	1	47	67	63	105	28	287	90	63	75
(Cytochrome_B);(UCR_14kD)	1	51	82	54	93	25	194	100	65	94
(Cytochrome_B);(UCR_Fe-S_N)	1	25	41	25	41	5	381	100	54	100
(Cytochrome_B);(UCR_Fe-S_N)	2	25	41	25	41	5	219	100	54	100
(Cytochrome_B);(UCR_TM)	1	43	63	46	85	24	214	79	59	93
(Cytochrome_B);(UCR_TM)	2	42	69	46	85	24	482	100	70	91
(Cytochrome_B);(UcrQ)	1	48	78	52	90	20	156	100	67	92
(DAP3);(Ribosomal_S7)	1	47	48	55	56	16	696	100	2	85
(DAP3);(Ribosomal_S9)	1	64	65	64	65	5	651	98	3	100
(DEAD);(Helicase_C)	1	109	168	162	236	5	484	100	90	67
(DEAD);(rRNA_proc-arch)	1	21	22	22	23	44	304	91	73	95
(DNA_RNApol_7kD);(RNA_pol_A_bac)	1	107	151	201	330	27	346	100	62	53
(DNA_RNApol_7kD);(RNA_pol_Rpb2_1)	1	200	289	200	329	18	238	100	53	100
(DNA_RNApol_7kD);(RNA_pol_Rpb2_6)	1	205	293	205	336	31	657	100	53	100
(DNA_gyraseB);(HATPase_c)	1	31	39	33	48	10	497	97	90	94
(DNA_gyraseB_C);(DNA_topoisoIV)	1	29	69	30	71	34	313	94	77	97
(DNA_gyraseB_C);(DNA_topoisoIV)	2	29	65	30	71	35	214	94	74	97
(DNA_photolyase);(FAD_binding_7)	1	47	108	47	108	12	1317	100	91	100
(DNA_pol3_beta);(DNA_pol3_beta_2)	1	60	104	62	106	11	624	100	98	97
(DNA_pol3_beta);(DNA_pol3_beta_3)	1	65	109	66	110	11	603	93	87	98
(DNA_pol3_beta_2);(DNA_pol3_beta_3)	1	60	104	62	106	11	677	100	98	97
(DNA_pol_B);(DNA_pol_B_exo1)	1	60	220	60	223	3	1078	100	98	100
(DNA_pol_B_palm);(DNA_pol_B_thumb)	1	41	666	41	690	2	514	96	95	100
(DNA_pol_B_palm);(DNA_pol_lambd_f)	1	35	652	35	676	2	399	96	95	100
(DNA_pol_B_thumb);(HHH_8)	1	20	392	31	648	12	215	95	95	65
(DNA_pol_lambd_f);(HHH_8)	1	26	591	30	650	20	198	95	95	87
(DNA_topoisoIV);(Toprim)	1	38	80	44	95	11	316	95	79	86
(DPPIV_N);(Peptidase_S9)	1	45	170	54	184	16	1402	100	94	83
(DPPIV_N);(Peptidase_S9)	2	41	153	54	184	16	329	89	93	76
(DSS1_SEM1);(PCI)	1	72	72	81	82	18	678	100	21	89
(DSS1_SEM1);(PCI)	2	40	40	81	82	45	304	100	18	49
(DSS1_SEM1);(RPN7)	1	49	49	55	55	39	175	100	4	89
(DUF1968);(V-set)	1	89	143	253	449	13	147	97	95	35
(DUF3439);(LRR_8)	1	39	44	53	60	10	639	100	91	74
(DUF4976);(Sulfatase)	1	41	53	41	53	1	2024	100	79	100
(DUF4982);(Glyco_hydro_2_C)	1	20	29	22	32	11	474	100	97	91
(DUF5110);(Glyco_hydro_31)	1	30	116	31	117	1	1116	100	91	97
(Dala_Dala_lig_C);(Dala_Dala_lig_N)	1	31	57	31	59	10	941	98	98	100
(DapB_C);(DapB_N)	1	23	36	23	36	14	1211	97	97	100
(Dimerisation);(Methyltransf_2)	1	29	68	29	68	15	731	99	100	100
(Dimerisation2);(Methyltransf_2)	1	25	46	25	46	9	1034	83	96	100
(E1-E2_ATPase);(Hydrolase)	1	58	99	90	185	15	663	100	65	64
(E1_dh);(Transket_pyr)	1	25	76	25	76	13	820	99	97	100
(E1_dh);(Transket_pyr)	2	24	74	25	76	13	1246	99	97	96
(EF-hand_1);(EF-hand_7)	1	24	29	68	86	5	404	86	69	35
(EF-hand_1);(S_100)	1	76	182	79	187	4	492	100	63	96
(EF-hand_1);(S_100)	2	26	38	79	187	14	172	13	16	33
(EF-hand_7);(IQ)	1	83	90	98	110	3	607	99	68	85
(EF-hand_7);(KCNQ_channel)	1	21	23	22	24	3	523	100	35	95
(EFG_C);(EFG_IV)	1	26	37	30	43	5	457	100	84	87
(EFG_C);(Ribosomal_L11_N)	1	61	62	71	75	14	220	100	8	86
(EFG_IV);(Ribosomal_S30)	1	20	20	27	27	51	223	100	5	74
(EFTUD2);(WD40)	1	37	37	37	37	13	269	92	14	100
(EFTUD2);(WD40)	2	29	29	37	37	20	433	90	10	78
(EIF_2_alpha);(GTP_EFTU_D2)	1	41	41	42	42	21	454	93	32	98
(ELFV_dehydrog);(ELFV_dehydrog_N)	1	50	80	50	80	2	608	98	79	100
(ELFV_dehydrog);(ELFV_dehydrog_N)	2	33	46	50	80	17	230	96	72	66
(EMG1);(Ribosomal_S7)	1	27	27	31	31	70	323	100	4	87
(ERAP1_C);(Peptidase_M1)	1	29	69	31	72	11	1691	100	83	94
(ERCC3_RAD25_C);(Tfb5)	1	37	40	40	43	27	494	98	32	92
(Endonuclease_NS);(Phosphodiest)	1	28	65	28	70	11	766	91	86	100
(Enolase_C);(Enolase_N)	1	48	101	49	102	40	638	94	93	98
(Enolase_C);(Enolase_N)	2	47	100	49	102	40	1483	100	95	96
(F-box-like);(Skp1)	1	29	40	29	41	13	961	92	80	100
(FAD_binding_2);(Succ_DH_flav_C)	1	21	59	24	93	12	2744	100	97	88
(FAD_binding_5);(Fer2_2)	1	20	62	20	71	16	212	98	98	100
(FAD_binding_6);(NAD_binding_1)	1	60	85	63	97	3	739	100	89	95
(FAT);(PI3_PI4_kinase)	1	75	76	76	82	7	522	100	49	99
(FATC);(PI3_PI4_kinase)	1	80	81	81	87	15	1536	100	48	99
(FERM_C);(FERM_M)	1	37	92	40	96	8	440	100	100	92
(FERM_C);(FERM_N)	1	33	88	38	94	11	288	100	100	87
(FERM_M);(FERM_N)	1	37	92	42	99	8	482	100	100	88
(FG-GAP);(Integrin_alpha2)	1	45	86	45	89	8	227	100	58	100
(FG-GAP);(Integrin_beta)	1	54	102	56	109	29	268	99	62	96
(FKBP_C);(RYDR_ITPR)	1	81	81	81	81	75	328	100	0	100
(FKBP_C);(SPRY)	1	80	80	81	81	73	258	100	0	99
(FRB_dom);(PI3_PI4_kinase)	1	22	27	23	29	15	241	100	56	96
(FXa_inhibition);(Trypsin)	1	49	271	50	280	22	421	96	98	98
(F_actin_cap_B);(F-actin_cap_A)	1	26	28	28	32	36	3038	93	68	93
(Fapy_DNA_glyco);(H2TH)	1	22	115	23	118	11	542	98	98	96
(Fcf1);(Ribosomal_S4)	1	26	26	28	28	63	297	100	4	93
(Fcf1);(Ribosomal_S8)	1	30	30	32	32	63	238	100	3	94
(Fe_hyd_lg_C);(Fe_hyd_SSU)	1	21	38	21	41	27	2053	97	87	100
(Fer2);(Fer2_2)	1	20	80	20	80	24	739	99	99	100
(Fer2_4);(NADH-G_4Fe-4S_3)	1	36	49	36	53	53	395	100	55	100
(Fer2_4);(NADH_4Fe-4S)	1	136	142	155	163	24	288	99	26	88
(Fer4_7);(Molybdop_Fe4S4)	1	27	27	106	114	36	114	100	15	25
(Fer4_7);(NADH-G_4Fe-4S_3)	1	140	148	149	157	21	169	100	22	94
(Fer4_7);(Oxidored_q6)	1	158	164	160	168	25	376	99	19	99
(Fer4_7);(PSI_PsaE)	1	44	49	44	49	52	512	100	20	100
(Fer4_7);(PsaA_PsaB)	1	43	48	45	50	45	248	100	31	96
(Fer4_7);(PsaD)	1	44	49	44	49	52	1047	100	31	100
(Fibrillarin);(NOP5NT)	1	35	35	35	35	28	343	100	6	100
(Fibrillarin);(Nop)	1	28	28	42	46	46	158	100	4	67
(Fibrillarin);(Nop)	2	24	24	42	46	45	124	96	4	57
(Fibrillarin);(Ribosomal_L7Ae)	1	33	33	39	42	41	334	100	3	85
(Filo_glycop);(TLV_coat)	1	33	53	33	53	29	444	87	68	100
(Filo_glycop);(TLV_coat)	2	33	53	33	53	29	1939	96	70	100
(Filo_glycop);(TLV_coat)	3	24	27	33	53	29	393	78	56	73
(Fimbrial);(FimH_man-bind)	1	36	75	41	84	20	1125	97	97	88
(Fimbrial);(PapD_C)	1	22	27	22	27	10	292	100	81	100
(Fimbrial);(PapD_N)	1	22	27	22	27	10	1348	100	81	100
(Flagellin_C);(Flagellin_N)	1	44	44	44	44	7	1885	82	41	100
(Flagellin_C);(Flagellin_N)	2	25	25	44	44	8	704	60	4	57
(Flagellin_C);(Flagellin_N)	3	23	23	44	44	40	1010	65	4	52
(Flagellin_C);(Flagellin_N)	4	21	21	44	44	45	266	67	5	48
(Flavi_DEAD);(Helicase_C)	1	20	56	25	71	14	748	100	93	80
(Flavi_NS2B);(Peptidase_S7)	1	30	72	31	75	23	1479	94	90	97
(Flavi_NS5);(FtsJ)	1	38	91	38	91	18	713	100	99	100
(Flavi_glycop_C);(Flavi_glycoprot)	1	91	102	134	150	9	696	100	43	68
(Flavi_glycop_C);(Flavi_glycoprot)	2	75	81	134	150	27	270	85	38	56
(Flavi_glycop_C);(Flavi_glycoprot)	3	39	40	134	150	29	500	88	2	29
(Flavi_glycop_C);(V-set)	1	20	21	73	79	17	382	100	38	27
(Flavi_glycoprot);(Flavi_M)	1	56	56	57	57	15	684	100	5	98
(Flavi_glycoprot);(Flavi_M)	2	33	33	57	57	15	382	100	0	58
(Flavi_glycoprot);(Flavi_propep)	1	22	23	22	23	32	438	100	17	100
(Flu_PA);(Flu_PB1)	1	68	81	68	81	24	7951	100	72	100
(Flu_PA);(Flu_PB2)	1	64	77	66	79	22	1542	100	73	97
(Flu_PB1);(Flu_PB2)	1	66	80	66	80	22	5706	100	72	100
(Fn3-like);(Glyco_hydro_3)	1	36	69	36	72	14	710	100	100	100
(Fn3-like);(Glyco_hydro_3_C)	1	36	69	36	72	14	559	100	100	100
(FtsZ_C);(Tubulin)	1	30	84	32	89	7	494	100	100	94
(FtsZ_C);(Tubulin)	2	20	73	32	89	10	439	1	11	62
(FumaraseC_C);(Lyase_1)	1	26	52	26	56	22	253	96	96	100
(FumaraseC_C);(Lyase_1)	2	24	47	26	56	27	251	94	96	92
(FumaraseC_C);(Lyase_1)	3	24	45	26	56	22	297	93	96	92
(Furin-like);(Recep_L_domain)	1	88	93	101	108	15	1061	100	62	87
(Furin-like);(Recep_L_domain)	2	37	39	101	108	20	317	100	33	37
(G-alpha);(V-set)	1	152	152	304	304	39	240	62	3	50
(G-alpha);(V-set)	2	141	141	304	304	30	821	84	4	46
(G-alpha);(WD40)	1	379	380	391	392	11	331	71	6	97
(G-alpha);(WD40)	2	377	378	391	392	6	551	71	6	96
(G-alpha);(WD40)	3	318	318	391	392	6	151	70	5	81
(G-alpha);(WD40)	4	194	194	391	392	19	133	79	5	50
(G-alpha);(WD40)	5	130	131	391	392	9	195	89	8	33
(G-gamma);(Myc-LZ)	1	31	33	52	62	4	626	100	48	60
(G-gamma);(WD40)	1	434	454	434	455	12	347	72	13	100
(G-gamma);(WD40)	2	432	450	434	455	12	343	72	12	100
(G-gamma);(WD40)	3	404	422	434	455	12	303	70	12	93
(G10);(PRO8NT)	1	37	37	38	38	53	1109	92	8	97
(G10);(PROCN)	1	32	32	37	37	53	220	69	6	86
(G6PD_C);(G6PD_N)	1	21	37	21	37	27	2202	100	76	100
(GAF);(PAS_2)	1	39	77	39	92	14	1881	99	96	100
(GAF);(PHY)	1	26	42	27	52	12	631	98	95	96
(GBP);(GBP_C)	1	23	29	23	29	9	1448	97	90	100
(GFO_IDH_MocA);(GFO_IDH_MocA_C)	1	72	96	72	119	1	1242	97	97	100
(GF_recep_IV);(Recep_L_domain)	1	47	55	50	59	29	535	100	87	94
(GHMP_kinases_C);(GHMP_kinases_N)	1	37	75	43	85	5	141	95	92	86
(GMC_oxred_C);(GMC_oxred_N)	1	45	124	45	139	1	4066	100	92	100
(GP120);(GP41)	1	141	164	141	164	51	1214	99	31	100
(GP120);(V-set)	1	128	169	242	302	9	406	98	38	53
(GP120);(V-set)	2	29	41	242	302	17	533	95	46	12
(GP120);(V-set)	3	21	35	242	302	28	281	71	17	9
(GP120);(ig)	1	32	41	34	44	25	1032	95	32	94
(GP41);(V-set)	1	30	41	100	135	8	406	95	71	30
(GST_C);(GST_N)	1	84	103	91	119	5	249	89	92	92
(GST_C);(GST_N)	2	84	106	91	119	6	533	99	97	92
(GST_C);(GST_N_3)	1	26	57	26	58	6	736	100	100	100
(GST_C);(GST_N_3)	2	24	54	26	58	6	375	94	93	92
(GST_C_2);(GST_N)	1	26	56	27	57	5	537	100	100	96
(GST_C_2);(GST_N_3)	1	77	122	77	126	4	585	100	98	100
(GST_C_2);(GST_N_3)	2	36	53	77	126	5	303	91	87	47
(GST_C_3);(GST_N)	1	95	259	99	295	7	759	100	99	96
(GST_C_3);(GST_N)	2	92	257	99	295	7	244	96	95	93
(GTP_EFTU);(GTP_EFTU_D2)	1	105	155	149	244	2	589	100	86	70
(GTP_EFTU);(GTP_EFTU_D3)	1	32	55	62	106	18	575	98	98	52
(GTP_EFTU);(GTP_EFTU_D3)	2	23	35	62	106	4	603	100	89	37
(GTP_EFTU);(LSM)	1	36	36	46	46	14	208	92	14	78
(GTP_EFTU);(PROCN)	1	51	51	53	53	17	565	75	18	96
(GTP_EFTU);(Ribosomal_L6)	1	24	24	92	106	53	140	100	4	26
(GTP_EFTU_D2);(GTP_EFTU_D3)	1	59	94	63	105	2	448	99	93	94
(GTP_EFTU_D2);(Ribosom_S12_S23)	1	26	26	47	49	9	186	100	4	55
(GalKase_gal_bdg);(GHMP_kinases_C)	1	22	48	22	48	2	496	96	94	100
(GalKase_gal_bdg);(GHMP_kinases_N)	1	22	47	22	48	2	1170	96	94	100
(Gal_mutarotas_2);(Glyco_hydro_31)	1	40	131	41	133	9	2094	100	89	98
(Gln-synt_C);(Gln-synt_N)	1	36	62	36	62	11	1055	100	74	100
(Gly_radical);(PFL-like)	1	20	34	21	35	14	2785	94	94	95
(Glyco_hydro_2);(Glyco_hydro_2_C)	1	72	168	72	169	6	823	99	92	100
(Glyco_hydro_2);(Glyco_hydro_2_N)	1	79	172	81	194	6	218	98	91	98
(Glyco_hydro_20);(Glyco_hydro_20b)	1	22	49	22	50	11	767	94	94	100
(Glyco_hydro_2_C);(Glyco_hydro_2_N)	1	72	184	74	187	8	1614	99	92	97
(Glyco_hydro_3);(Glyco_hydro_3_C)	1	49	136	49	139	4	1891	100	96	100
(Glyco_hydro_30);(Glyco_hydro_30C)	1	22	63	22	65	6	827	95	87	100
(Glyco_hydro_32C);(Glyco_hydro_32N)	1	23	64	25	71	8	1556	97	97	92
(Glyco_tran_28_C);(Glyco_transf_28)	1	26	33	26	36	2	574	94	94	100
(Glyco_transf_4);(Glycos_transf_1)	1	31	55	31	55	6	766	96	95	100
(Glycos_trans_3N);(Glycos_transf_3)	1	29	89	29	89	6	1048	100	99	100
(Glycos_trans_3N);(Glycos_transf_3)	2	29	88	29	89	6	267	89	95	100
(Gp_dh_C);(Gp_dh_N)	1	98	197	99	198	6	463	91	96	99
(Gp_dh_C);(Gp_dh_N)	2	97	196	99	198	6	234	91	95	98
(Gp_dh_C);(Gp_dh_N)	3	95	192	99	198	6	151	100	99	96
(H2TH);(zf-FPG_IleRS)	1	20	91	20	93	16	603	98	98	100
(HABP4_PAI-RBP1);(KH_2)	1	23	24	30	43	60	121	100	21	77
(HABP4_PAI-RBP1);(Ribosomal_S3_C)	1	37	38	40	53	6	783	100	21	92
(HABP4_PAI-RBP1);(Ribosomal_S5)	1	37	39	39	52	6	241	100	23	95
(HATPase_c);(HSP90)	1	73	371	78	479	2	1099	100	95	94
(HATPase_c);(HisKA)	1	28	38	32	47	12	428	100	95	88
(HEAT_2);(MitMem_reg)	1	35	35	66	66	51	124	94	9	53
(HHH_5);(Rad51)	1	22	38	22	38	17	242	39	16	100
(HH_signal);(Hint)	1	24	29	24	29	20	293	97	69	100
(HMGL-like);(PYC_OADA)	1	22	35	22	41	18	2524	80	80	100
(HTH_9);(RNA_pol_3_Rpc31)	1	22	22	30	30	17	639	100	50	73
(HTH_9);(RNA_pol_Rpb1_1)	1	31	31	31	31	27	342	100	48	100
(Helicase_C);(RecQ_Zn_bind)	1	22	31	22	31	16	650	100	90	100
(Helicase_C);(ResIII)	1	47	57	51	62	10	448	100	72	92
(Helicase_C_2);(Ssl1)	1	37	40	37	40	41	483	98	32	100
(Hexapep);(NTP_transferase)	1	22	23	23	24	11	294	100	26	96
(Hexokinase_1);(Hexokinase_2)	1	43	81	43	81	12	3509	98	93	100
(Histone);(Histone_H2A_C)	1	321	482	330	502	11	243	82	51	97
(Histone);(Histone_H2A_C)	2	293	452	330	502	10	606	85	49	89
(Histone);(Histone_H2A_C)	3	50	75	330	502	13	532	93	72	15
(Histone);(TAF)	1	310	486	311	490	7	1361	87	55	100
(Histone_H2A_C);(TAF)	1	269	427	280	451	7	229	86	50	96
(Hormone_2);(HRM)	1	36	42	37	43	5	310	100	26	97
(IBN_N);(Ras)	1	32	92	33	93	5	395	99	68	97
(IBN_N);(Xpo1)	1	20	23	26	35	9	892	100	96	77
(IF-2);(Ribosom_S12_S23)	1	23	23	23	23	19	415	100	13	100
(IF-2B);(NTP_transferase)	1	29	29	30	31	32	448	97	21	97
(IMS);(IMS_C)	1	30	290	46	455	8	429	100	100	65
(IMS);(IMS_HHH)	1	38	202	38	208	9	303	100	100	100
(IN_DBD_C);(Integrase_Zn)	1	23	23	27	27	38	199	100	26	85
(IN_DBD_C);(rve)	1	28	28	35	36	19	193	100	21	80
(Ig_3);(I-set)	1	53	58	96	105	10	265	100	95	55
(IlvC);(IlvN)	1	44	62	44	63	13	607	100	73	100
(IlvC);(IlvN)	2	42	60	44	63	14	445	97	72	95
(IlvC);(IlvN)	3	21	25	44	63	25	261	76	4	48
(Img2);(MRP-63)	1	59	64	59	64	63	514	100	14	100
(Img2);(Ribosomal_L27A)	1	61	66	75	80	21	114	94	12	81
(Img2);(Ribosomal_L4)	1	61	66	76	81	17	165	100	14	80
(Inhibitor_I29);(Peptidase_C1)	1	22	28	22	28	18	739	100	96	100
(Inhibitor_I9);(Peptidase_S8)	1	35	60	38	69	12	1142	95	100	92
(Ins145_P3_rec);(MIR)	1	94	105	117	128	15	740	100	21	80
(Ins145_P3_rec);(MIR)	2	43	43	117	128	16	279	100	5	37
(Ins145_P3_rec);(RIH_assoc)	1	95	95	112	112	73	257	100	2	85
(Ins145_P3_rec);(RYDR_ITPR)	1	90	90	124	134	72	197	100	2	73
(Ins145_P3_rec);(RYDR_ITPR)	2	72	80	124	134	7	167	100	19	58
(Integrase_Zn);(rve)	1	22	23	28	29	24	138	100	39	79
(Interfer-bind);(Tissue_fac)	1	28	51	34	70	11	462	94	92	82
(Internalin_N);(LRR_4)	1	25	25	42	45	13	429	88	76	60
(Ion_trans);(RR_TM4-6)	1	95	95	95	95	21	422	100	2	100
(Ion_trans);(RR_TM4-6)	2	65	65	95	95	33	1093	100	3	68
(JAB);(MitMem_reg)	1	95	98	104	107	13	246	99	29	91
(JAB);(PC_rep)	1	64	64	73	73	21	184	100	20	88
(JAB);(Prot_ATP_ID_OB)	1	23	23	71	71	67	303	70	13	32
(JAB);(Sec63)	1	23	28	26	31	38	180	68	54	88
(JAB);(VWA_2)	1	74	74	74	74	48	604	100	20	100
(JmjC);(JmjN)	1	26	461	27	466	23	683	99	99	96
(KAsynt_C_assoc);(Ketoacyl-synt_C)	1	56	80	56	80	8	2408	99	80	100
(KAsynt_C_assoc);(ketoacyl-synt)	1	56	80	58	82	8	953	99	80	97
(KAsynt_C_assoc);(ketoacyl-synt)	2	45	68	58	82	9	169	96	79	78
(KH_1);(Ribosomal_S11)	1	30	30	37	37	62	288	100	17	81
(KH_2);(Ribosomal_S10)	1	322	341	784	1116	12	148	100	10	41
(KH_2);(Ribosomal_S14)	1	217	491	776	1107	12	118	100	15	28
(KH_2);(S10_plectin)	1	279	280	279	292	20	840	100	8	100
(KOW);(Ribosomal_L18A)	1	237	238	241	254	18	245	100	17	98
(KOW);(Ribosomal_L34e)	1	272	273	276	289	23	324	100	12	99
(KOW);(Ribosomal_L6)	1	81	81	88	88	33	173	100	2	92
(KOW);(Ribosomal_L7Ae)	1	250	251	270	283	24	277	100	14	93
(KOW);(Ribosomal_S17_N)	1	28	28	318	331	24	171	64	18	9
(KOW);(Tim44)	1	23	24	55	60	65	109	100	25	42
(Kinesin);(Tubulin)	1	56	56	74	74	26	184	98	27	76
(Kinesin);(Tubulin_C)	1	58	58	75	75	25	123	98	22	77
(Kunitz_BPTI);(Trypsin)	1	41	97	44	103	15	547	99	98	93
(L51_S25_CI-B8);(MRP-63)	1	58	63	58	63	64	184	98	14	100
(L51_S25_CI-B8);(MRP-S26)	1	47	48	47	48	78	377	100	4	100
(L51_S25_CI-B8);(Ribonucleas_3_3)	1	62	67	63	68	15	125	100	15	98
(L51_S25_CI-B8);(Ribosomal_L50)	1	68	73	68	73	12	613	100	15	100
(L51_S25_CI-B8);(Ribosomal_S17)	1	47	48	47	48	56	483	92	2	100
(LHC);(PRCH)	1	28	30	28	31	37	234	97	20	100
(LHC);(PRCH)	2	26	28	28	31	38	181	100	25	93
(LHC);(Photo_RC)	1	28	29	29	32	30	348	100	17	97
(LRR_4);(LRR_8)	1	158	206	172	230	2	726	99	80	92
(LRR_4);(LRR_8)	2	24	36	172	230	13	157	22	19	14
(LRR_4);(LRR_adjacent)	1	21	21	29	30	22	545	100	86	72
(LRR_8);(LRRCT)	1	41	58	58	94	8	179	97	93	71
(LRR_8);(LRRNT)	1	100	110	129	156	4	640	98	80	78
(LRR_8);(LRRNT_2)	1	22	29	42	52	14	790	100	90	52
(LRR_9);(RRM_1)	1	43	43	49	49	26	532	93	14	88
(Ldh_1_C);(Ldh_1_N)	1	143	296	145	298	9	1655	100	97	99
(Ldh_1_C);(Ldh_1_N)	2	142	295	145	298	9	909	97	96	98
(Ldh_1_C);(Ldh_1_N)	3	84	191	145	298	16	234	95	91	58
(Lectin_C);(Ly49)	1	37	68	38	69	5	642	85	81	97
(Lig_chan);(Lig_chan-Glu_bd)	1	200	452	221	538	2	327	98	73	90
(Lig_chan);(PMP22_Claudin)	1	31	31	31	31	46	391	100	13	100
(Lipoprotein_18);(SmpA_OmlA)	1	29	46	29	50	57	138	100	59	100
(Lipoprotein_18);(YfiO)	1	30	50	30	51	89	1860	100	56	100
(M20_dimer);(Peptidase_M20)	1	45	61	48	64	5	1308	100	100	94
(M20_dimer);(Peptidase_M20)	2	33	44	48	64	4	430	98	100	69
(MA3);(U5_2-snRNA_bdg)	1	30	30	31	31	30	408	90	10	97
(MA3);(U6-snRNA_bdg)	1	25	25	29	29	30	145	88	8	86
(MCM);(MCM_OB)	1	41	41	43	43	26	411	98	34	95
(MCM);(MCM_OB)	2	36	36	43	43	23	340	100	33	84
(MCM_N);(MCM_OB)	1	53	54	54	55	11	496	100	48	98
(MCM_N);(MCM_OB)	2	39	39	54	55	15	175	100	31	72
(MCM_N);(Sld5)	1	23	23	23	23	11	453	100	39	100
(MCM_N);(Sld5)	2	21	21	23	23	20	282	100	38	91
(MHC_I);(V-set)	1	153	269	182	304	12	389	96	44	84
(MHC_I);(V-set)	2	29	48	182	304	20	354	79	40	16
(MHC_II_alpha);(MHC_II_beta)	1	162	221	164	226	10	922	99	97	99
(MHC_II_alpha);(V-set)	1	53	75	58	81	17	245	93	31	91
(MHC_II_beta);(V-set)	1	55	72	58	81	14	257	93	33	95
(MHC_I_3);(V-set)	1	24	80	28	86	14	375	95	72	86
(MIR);(RYDR_ITPR)	1	90	99	96	107	7	212	100	21	94
(MMS1_N);(WD40)	1	32	34	34	37	13	168	100	62	94
(MRP-63);(Ribosomal_L30)	1	58	63	58	63	63	667	100	14	100
(MRP-63);(Ribosomal_L4)	1	57	62	57	62	69	173	100	15	100
(MRP-63);(Ribosomal_L50)	1	26	26	58	63	69	110	100	12	45
(MRP-L27);(MRP-L47)	1	69	74	69	74	21	1044	100	14	100
(MRP-L27);(Ribosomal_L23)	1	69	74	69	74	14	629	100	14	100
(MRP-L27);(Ribosomal_L34)	1	66	71	67	72	21	443	100	14	99
(MRP-L28);(MRP-L46)	1	65	70	66	71	10	1204	100	16	98
(MRP-L28);(Ribosomal_S10)	1	56	61	56	61	73	1267	100	16	100
(MRP-L47);(Ribosomal_L23)	1	80	85	80	85	14	700	100	13	100
(MRP-L51);(Ribosomal_L27A)	1	56	61	57	62	88	290	100	15	98
(MRP-L51);(Ribosomal_L4)	1	58	63	58	63	88	1673	100	14	100
(MRP-S22);(MRP-S34)	1	47	48	47	48	82	262	100	4	100
(MRP-S22);(Ribosomal_S16)	1	47	48	47	48	88	670	100	4	100
(MRP-S22);(Ribosomal_S18)	1	47	48	47	48	88	407	94	4	100
(MRP-S22);(Ribosomal_S5_C)	1	47	48	47	48	87	271	98	4	100
(MRP-S23);(MRP-S35)	1	47	48	47	48	86	911	100	4	100
(MRP-S23);(Ribosomal_S2)	1	44	45	44	45	13	1678	100	4	100
(MRP-S23);(Ribosomal_S5)	1	48	49	48	49	13	483	100	4	100
(MRP-S24);(MRP-S28)	1	47	48	47	48	76	372	100	4	100
(MRP-S24);(MRP-S31)	1	47	48	47	48	3	286	100	4	100
(MRP-S24);(MRP-S33)	1	46	47	47	48	79	530	100	4	98
(MRP-S24);(Ribosomal_S10)	1	47	48	47	48	88	595	100	4	100
(MRP-S24);(Ribosomal_S14)	1	47	48	47	48	84	991	100	4	100
(MRP-S26);(MRP-S34)	1	47	48	47	48	78	183	90	0	100
(MRP-S26);(Ribosomal_S16)	1	48	49	51	52	19	311	100	4	94
(MRP-S26);(Ribosomal_S18)	1	50	51	50	51	9	453	100	4	100
(MRP-S26);(Ribosomal_S6)	1	50	51	51	52	9	899	100	2	98
(MRP-S27);(MRP-S34)	1	45	46	45	46	78	1308	100	4	100
(MRP-S28);(MRP-S31)	1	42	43	47	48	3	1036	100	5	89
(MRP-S28);(MRP-S33)	1	56	57	56	57	9	668	100	4	100
(MRP-S28);(Ribosomal_S10)	1	55	56	55	56	15	459	98	4	100
(MRP-S31);(MRP-S33)	1	46	47	47	48	3	667	100	4	98
(MRP-S31);(Ribosomal_S10)	1	47	48	47	48	3	249	100	4	100
(MRP-S32);(Ribosomal_L13)	1	57	62	58	63	68	244	100	15	98
(MRP-S32);(Ribosomal_L20)	1	57	62	58	63	68	362	100	15	98
(MRP-S32);(Ribosomal_L21p)	1	57	62	57	62	68	466	100	15	100
(MRP-S33);(Ribosomal_S14)	1	54	55	55	56	15	390	100	4	98
(MRP-S35);(Ribosomal_S2)	1	43	44	43	44	37	1037	100	5	100
(MRP_L53);(Ribosomal_L10)	1	56	61	56	61	68	692	100	15	100
(MSP);(PSII)	1	37	91	37	92	41	1298	100	29	100
(MSP);(PSII)	2	35	89	37	92	41	446	92	15	95
(MSP);(PSII)	3	29	78	37	92	46	742	100	27	78
(MSP);(Photo_RC)	1	37	91	37	92	46	603	100	23	100
(MSP);(Photo_RC)	2	36	90	37	92	46	577	100	29	97
(MSP);(PsbU)	1	23	77	23	78	32	451	100	30	100
(MaoC_dehydrat_N);(MaoC_dehydratas)	1	29	32	32	37	2	1132	84	59	91
(Metallophos);(STPPase_N)	1	52	74	59	83	14	1913	100	91	88
(MitMem_reg);(PCI)	1	80	81	93	94	12	236	100	19	86
(MitMem_reg);(Prot_ATP_ID_OB)	1	36	36	71	71	51	254	86	19	51
(MitMem_reg);(Prot_ATP_ID_OB)	2	27	27	71	71	21	145	96	11	38
(MitMem_reg);(Rpn3_C)	1	59	59	76	76	27	656	100	12	78
(Mitoc_L55);(MRP-L28)	1	54	59	54	59	67	774	100	15	100
(Mitoc_L55);(MRP-L46)	1	54	59	54	59	67	1115	100	15	100
(Mitoc_L55);(Ribosomal_S10)	1	54	59	54	59	66	864	100	15	100
(Molybdop_Fe4S4);(Molybdopterin)	1	41	59	43	64	13	1382	100	56	95
(Molybdop_Fe4S4);(Molydop_binding)	1	37	55	38	58	10	437	100	58	97
(Molybdopterin);(Molydop_binding)	1	32	63	58	93	10	1897	100	89	55
(Mt_ATP-synt_B);(Mt_ATP-synt_D)	1	74	74	74	74	18	972	100	20	100
(Mt_ATP-synt_B);(OSCP)	1	43	43	66	66	86	327	100	9	65
(Mur_ligase_C);(Mur_ligase_M)	1	48	96	54	106	6	579	92	85	89
(MutS_III);(MutS_IV)	1	22	40	22	40	6	550	100	100	100
(MutS_III);(MutS_V)	1	26	44	26	44	19	886	95	93	100
(Myb_DNA-binding);(RRM_4)	1	38	38	39	39	21	320	92	11	97
(Myb_DNA-binding);(SKIP_SNW)	1	33	33	39	39	21	305	91	6	85
(Myb_DNA-binding);(SKIP_SNW)	2	27	27	39	39	32	377	89	11	69
(Myosin_head);(Myosin_N)	1	93	159	94	162	15	301	99	84	99
(NADH5_C);(Oxidored_q2)	1	114	114	117	117	3	492	99	15	97
(NADH5_C);(Oxidored_q3)	1	29	29	65	65	8	316	97	21	45
(NADH5_C);(Proton_antipo_M)	1	131	131	135	135	3	612	92	15	97
(NADH5_C);(Proton_antipo_M)	2	115	115	135	135	3	1002	80	11	85
(NADH_4Fe-4S);(NADH-G_4Fe-4S_3)	1	152	158	157	165	21	425	100	24	97
(NADHdh);(Oxidored_q3)	1	153	158	155	160	12	963	99	17	99
(NADHdh);(Oxidored_q4)	1	156	161	156	161	24	2163	99	17	100
(NADHdh);(Oxidored_q6)	1	147	152	147	152	16	793	99	16	100
(NAD_binding_11);(NAD_binding_2)	1	51	74	51	74	2	518	95	91	100
(NMT);(NMT_C)	1	20	130	20	130	33	1793	98	96	100
(NOGCT);(Ribosomal_L24e)	1	27	27	29	29	35	241	100	44	93
(NOGCT);(Ribosomal_L3)	1	31	31	31	31	35	514	100	48	100
(Neur_chan_LBD);(Neur_chan_memb)	1	145	259	154	287	1	361	100	63	94
(Neur_chan_LBD);(Neur_chan_memb)	2	85	87	154	287	3	148	100	24	55
(NiFeSe_Hases);(Oxidored_q6)	1	45	147	47	159	4	1739	98	92	96
(NiFe_hyd_SSU_C);(NiFeSe_Hases)	1	27	115	29	131	6	1228	90	89	93
(NiFe_hyd_SSU_C);(Oxidored_q6)	1	20	62	24	96	32	675	98	95	83
(Nop);(Ribosomal_L7Ae)	1	55	58	56	59	18	498	100	29	98
(ORC2);(ORC3_N)	1	29	29	29	29	9	877	86	7	100
(ORC2);(ORC5_C)	1	28	28	28	28	17	689	54	4	100
(ORC3_N);(ORC4_C)	1	27	27	28	28	9	339	22	4	96
(ORC3_N);(ORC5_C)	1	28	28	28	28	9	1062	61	4	100
(ORC4_C);(ORC5_C)	1	29	29	29	29	11	919	86	7	100
(OTCace);(OTCace_N)	1	71	182	72	186	8	2143	100	98	99
(OTCace);(OTCace_N)	2	71	183	72	186	8	469	98	98	99
(Oxidored_q2);(Oxidored_q3)	1	156	161	156	161	12	2664	99	17	100
(Oxidored_q2);(Oxidored_q4)	1	151	156	154	159	13	409	99	18	98
(Oxidored_q2);(Proton_antipo_M)	1	158	163	158	163	9	1638	99	17	100
(Oxidored_q3);(Oxidored_q4)	1	155	160	156	161	12	1626	99	17	99
(Oxidored_q3);(Proton_antipo_M)	1	151	156	154	159	12	622	99	18	98
(Oxidored_q4);(Oxidored_q6)	1	89	94	113	118	25	377	100	17	79
(PARP);(PARP_reg)	1	25	88	28	98	33	1205	100	94	89
(PBP);(RF-1)	1	48	53	57	62	63	597	100	15	84
(PBP);(Ribosomal_L18p)	1	59	64	59	64	4	479	97	14	100
(PBP_dimer);(Transpeptidase)	1	54	139	55	156	11	964	100	93	98
(PCI);(RPN7)	1	40	40	81	82	20	129	100	22	49
(PCNA_C);(PCNA_N)	1	110	157	115	162	9	863	99	80	96
(PCNA_C);(PCNA_N)	2	104	149	115	162	11	664	90	62	90
(PDCD9);(Ribosomal_L17)	1	58	63	58	63	75	359	100	14	100
(PDCD9);(Ribosomal_L2)	1	55	60	58	63	73	371	100	15	95
(PDCD9);(Ribosomal_L23)	1	58	63	58	63	75	519	100	14	100
(PGM_PMM_I);(PGM_PMM_II)	1	29	79	30	92	10	803	94	90	97
(PGM_PMM_I);(PGM_PMM_III)	1	27	76	29	91	9	470	93	89	93
(PGM_PMM_II);(PGM_PMM_III)	1	27	76	29	91	9	1223	93	89	93
(PGM_PMM_III);(PGM_PMM_IV)	1	27	79	27	83	3	683	94	92	100
(PI3K_C2);(PI3Ka)	1	27	160	29	257	28	802	100	91	93
(PI3_PI4_kinase);(PI3K_rbd)	1	24	98	30	258	24	252	100	87	80
(PI3_PI4_kinase);(PI3Ka)	1	38	184	41	285	2	1067	99	90	93
(PK);(PK_C)	1	64	145	64	145	12	1403	100	97	100
(POTRA);(SmpA_OmlA)	1	29	49	29	50	74	336	100	55	100
(POTRA);(YfiO)	1	30	51	30	51	17	524	100	57	100
(PQQ_2);(PQQ_3)	1	24	28	30	52	2	522	96	68	80
(PQQ_2);(PQQ_3)	2	21	22	30	52	77	1176	100	59	70
(PRO8NT);(SKIP_SNW)	1	37	37	39	39	32	265	92	11	95
(PROCN);(SKIP_SNW)	1	40	40	40	40	32	1401	92	10	100
(PROCN);(WD40)	1	34	34	40	40	7	238	91	12	85
(PROCN);(WD40)	2	29	29	40	40	7	186	90	10	72
(PROCT);(Sec63)	1	35	40	37	42	41	886	68	40	95
(PRY);(SPRY)	1	45	59	45	59	13	1209	95	64	100
(PSI);(Sema)	1	45	45	46	46	9	409	89	69	98
(PSII);(Ycf9)	1	42	90	42	97	25	435	100	21	100
(PSII_Ycf12);(Ycf9)	1	33	87	33	88	27	398	100	21	100
(PSI_8);(PSI_PsaH)	1	26	32	26	32	32	321	100	19	100
(PSI_PsaE);(PSI_PsaF)	1	28	33	65	71	36	245	100	24	43
(PSI_PsaF);(PSI_PsaJ)	1	68	79	68	79	28	656	100	28	100
(PapD_C);(PapD_N)	1	33	43	42	53	16	528	98	91	79
(Peptidase_M16);(Peptidase_M16_C)	1	104	174	110	194	7	874	99	72	95
(Peptidase_M16);(Peptidase_M16_C)	2	31	41	110	194	49	2641	100	54	28
(Peptidase_M16);(Peptidase_M16_M)	1	25	52	27	60	18	1257	100	79	93
(Peptidase_M16);(UCR_14kD)	1	45	65	48	74	25	366	80	55	94
(Peptidase_M16);(UCR_TM)	1	46	79	47	83	22	472	100	68	98
(Peptidase_M16);(Ubiq-Cytc-red_N)	1	31	62	31	63	23	738	100	71	100
(Peptidase_M16_C);(Peptidase_M16_M)	2	25	52	32	65	7	3790	100	79	78
(Peptidase_M16_C);(UCR_TM)	1	44	71	47	83	24	307	100	65	94
(Peptidase_M16_C);(UCR_UQCRX_QCR9)	1	33	51	37	59	13	149	96	61	89
(Peptidase_M16_C);(Ubiq-Cytc-red_N)	1	31	61	31	64	19	652	100	70	100
(Peptidase_M16_C);(Ubiq-Cytc-red_N)	2	25	48	31	64	11	401	100	73	81
(Peptidase_M16_C);(UcrQ)	1	52	90	52	91	10	448	100	67	100
(Peptidase_M27);(Toxin_trans)	1	25	39	27	42	16	1086	100	90	93
(Peptidase_M28);(TFR_dimer)	1	20	104	20	104	21	785	99	93	100
(Peptidase_S9);(Peptidase_S9_N)	1	27	74	27	74	9	3381	97	93	100
(Phosphodiest);(Somatomedin_B)	1	24	55	25	58	28	525	89	84	96
(Photo_RC);(PRC)	1	42	174	42	177	31	210	100	81	100
(Photo_RC);(PRC)	2	41	173	42	177	31	164	96	83	98
(Photo_RC);(PRCH)	1	38	170	42	177	34	1589	100	86	90
(Photo_RC);(PRCH)	2	38	170	42	177	34	434	96	85	90
(Photo_RC);(PSII)	1	47	101	47	102	16	2195	100	43	100
(Photo_RC);(PSII)	2	43	97	47	102	54	764	100	45	91
(Photo_RC);(PsbH)	1	44	98	44	99	69	210	100	33	100
(Photo_RC);(PsbI)	1	45	99	45	100	63	722	100	24	100
(Photo_RC);(PsbJ)	1	34	88	35	90	56	146	100	24	97
(Photo_RC);(PsbL)	1	44	98	44	99	77	402	100	26	100
(Photo_RC);(PsbL)	2	44	98	44	99	77	252	100	26	100
(Photo_RC);(PsbM)	1	25	79	35	90	36	171	100	23	71
(Photo_RC);(PsbT)	1	44	98	44	99	44	217	100	27	100
(Photo_RC);(PsbT)	2	44	97	44	99	44	425	100	24	100
(Photo_RC);(PsbX)	1	43	97	43	98	34	219	100	25	100
(Pico_P1A);(Rhv)	1	162	250	168	257	16	396	98	38	96
(Pico_P1A);(Rhv)	2	146	222	168	257	35	532	99	33	87
(Pkinase);(Pkinase_C)	1	39	82	45	97	12	1280	96	96	87
(Plug);(TonB_dep_Rec)	1	60	115	60	115	8	3437	98	96	100
(Plug_translocon);(Sec61_beta)	1	38	40	38	40	5	353	95	30	100
(Plug_translocon);(SecE)	1	43	45	44	46	5	280	96	29	98
(Pr_beta_C);(Proteasome)	1	113	343	116	407	20	635	93	69	97
(Pr_beta_C);(Proteasome)	2	36	37	116	407	30	501	100	22	31
(Pr_beta_C);(Proteasome)	3	29	76	116	407	74	153	100	79	25
(Pre-SET);(SET)	1	24	49	27	54	15	1742	98	98	89
(ProRS-C_1);(tRNA-synt_2b)	1	28	74	28	74	11	968	100	96	100
(Proteasome);(Proteasome_A_N)	1	150	384	151	446	26	231	100	73	99
(Proteasome);(Proteasome_A_N)	2	90	166	151	446	21	472	100	63	60
(Proteasome);(Proteasome_A_N)	3	79	307	151	446	22	152	100	79	52
(Proteasome);(Proteasome_A_N)	4	28	94	151	446	22	162	100	87	19
(Proteasome);(Proteasome_A_N)	5	21	22	151	446	26	123	100	36	14
(Proton_antipo_M);(Proton_antipo_N)	1	151	156	154	159	11	251	88	14	98
(PsaA_PsaB);(PSI_8)	1	69	80	69	80	29	524	100	25	100
(PsaA_PsaB);(PSI_PSAK)	1	67	78	68	79	12	583	100	19	99
(PsaA_PsaB);(PSI_PsaE)	1	78	89	78	89	45	297	100	19	100
(PsaA_PsaB);(PSI_PsaE)	2	63	64	78	89	50	354	98	16	81
(PsaA_PsaB);(PSI_PsaF)	1	71	82	71	82	28	850	100	27	100
(PsaA_PsaB);(PSI_PsaF)	2	69	80	71	82	28	913	100	29	97
(PsaA_PsaB);(PSI_PsaH)	1	26	32	26	32	32	761	100	22	100
(PsaA_PsaB);(PSI_PsaJ)	1	57	65	72	83	32	114	100	29	79
(PsaA_PsaB);(PSI_PsaJ)	2	53	57	72	83	30	118	100	21	74
(PsaA_PsaB);(PsaD)	1	78	89	78	89	52	796	100	26	100
(PsaA_PsaB);(PsaD)	2	78	89	78	89	52	711	100	27	100
(PsaA_PsaB);(PsaL)	1	73	84	73	84	34	534	100	25	100
(PsaA_PsaB);(PsaL)	2	70	81	73	84	34	294	100	25	96
(PsaA_PsaB);(PsaM)	1	48	53	48	53	34	902	100	25	100
(PsaD);(PSI_PsaE)	1	71	82	74	85	50	146	100	20	96
(PsaD);(PSI_PsaH)	1	20	23	20	23	35	558	100	17	100
(PsaD);(PsaL)	1	67	78	68	79	34	418	100	27	99
(PsaL);(PSI_8)	1	69	80	69	80	29	212	100	25	100
(PsaL);(PSI_PsaH)	1	26	32	26	32	32	1589	100	22	100
(PsaM);(PSI_8)	1	41	46	43	48	26	249	100	28	95
(PsbH);(PSII)	1	44	97	44	98	69	1473	100	33	100
(PsbH);(PsbX)	1	42	96	43	98	34	265	100	22	98
(PsbI);(PSII)	1	41	94	42	97	60	433	100	23	98
(PsbJ);(PSII_Ycf12)	1	28	81	28	83	28	159	100	19	100
(PsbJ);(PsbK)	1	35	89	35	90	30	137	100	21	100
(PsbK);(PSII)	1	45	99	45	100	50	737	100	32	100
(PsbK);(PSII_Ycf12)	1	33	86	33	88	31	504	100	22	100
(PsbK);(Ycf9)	1	42	96	42	97	25	263	100	19	100
(PsbL);(PSII)	1	44	98	44	99	72	605	100	27	100
(PsbL);(PsbM)	1	43	97	43	98	31	797	100	26	100
(PsbL);(PsbT)	1	44	98	44	99	31	592	100	23	100
(PsbM);(PsbT)	1	43	97	43	98	28	225	100	15	100
(PsbT);(PSII)	1	34	81	40	95	44	146	85	10	85
(PsbT);(PSII)	2	29	79	40	95	44	147	100	28	72
(PsbU);(PSII)	1	23	75	23	78	32	432	100	32	100
(PsbU);(PSII)	2	23	75	23	78	32	463	100	35	100
(Pyr_redox_2);(Pyr_redox_dim)	1	103	249	104	250	7	602	96	99	99
(Pyr_redox_2);(Pyr_redox_dim)	2	101	246	104	250	7	1160	100	99	97
(RAG1);(RAG2)	1	32	36	32	36	49	1560	100	22	100
(RF-1);(Ribosomal_L27A)	1	59	64	59	64	50	309	100	14	100
(RNA_POL_M_15KD);(RNA_pol_Rpb1_7)	1	115	221	116	241	40	318	100	58	99
(RNA_POL_M_15KD);(RNA_pol_Rpb2_2)	1	188	284	192	321	13	493	100	47	98
(RNA_POL_M_15KD);(TFIIF_alpha)	1	30	34	34	38	14	231	100	15	88
(RNA_pol_A_bac);(RNA_pol_L)	1	180	210	292	414	22	1377	99	36	62
(RNA_pol_A_bac);(RNA_pol_L)	2	40	51	292	414	40	148	100	43	14
(RNA_pol_A_bac);(RNA_pol_N)	1	204	294	205	336	27	888	100	57	100
(RNA_pol_A_bac);(RNA_pol_Rpb1_3)	1	253	306	288	414	14	602	99	30	88
(RNA_pol_A_bac);(RNA_pol_Rpb1_3)	2	32	87	288	414	81	303	100	92	11
(RNA_pol_A_bac);(RNA_pol_Rpb2_6)	1	288	397	494	750	34	1194	99	45	58
(RNA_pol_A_bac);(RNA_pol_Rpb2_6)	2	203	293	494	750	27	562	100	57	41
(RNA_pol_I_A49);(RNA_polI_A34)	1	38	42	38	42	42	1002	100	69	100
(RNA_pol_L);(RNA_pol_L_2)	1	41	42	41	42	20	862	100	50	100
(RNA_pol_L);(RNA_pol_Rpb1_2)	1	253	356	267	393	49	199	99	47	95
(RNA_pol_L);(RNA_pol_Rpb1_3)	1	239	292	287	413	28	187	99	30	83
(RNA_pol_L);(RNA_pol_Rpb1_3)	2	32	78	287	413	82	137	99	92	11
(RNA_pol_L);(RNA_pol_Rpb2_6)	1	321	430	329	457	10	421	99	44	98
(RNA_pol_L);(RNA_pol_Rpb2_6)	2	280	406	329	457	49	244	99	48	85
(RNA_pol_L_2);(RNA_pol_Rpb1_2)	1	202	290	204	333	26	224	100	45	99
(RNA_pol_L_2);(RNA_pol_Rpb1_3)	1	204	305	205	336	22	539	100	46	100
(RNA_pol_L_2);(RNA_pol_Rpb2_6)	1	201	291	204	333	26	252	100	57	99
(RNA_pol_L_2);(RNA_pol_Rpb8)	1	127	211	181	309	26	160	100	41	70
(RNA_pol_N);(RNA_polI_A34)	1	20	23	31	35	89	138	100	74	65
(RNA_pol_N);(RNA_pol_Rpb2_1)	1	164	251	201	330	20	229	100	61	82
(RNA_pol_N);(RNA_pol_Rpb2_6)	1	205	293	205	336	33	1344	100	56	100
(RNA_pol_Rbc25);(RNA_pol_Rpb2_7)	1	29	29	30	30	36	169	100	45	97
(RNA_pol_Rbc25);(RNA_pol_Rpb4)	1	33	33	33	33	28	657	100	52	100
(RNA_pol_Rpa2_4);(RNA_polI_A34)	1	35	39	36	40	89	240	100	67	97
(RNA_pol_Rpa2_4);(RNA_pol_Rpb1_4)	1	41	45	42	46	55	171	100	71	98
(RNA_pol_Rpb1_1);(RNA_pol_Rpb1_2)	1	89	111	139	183	15	118	100	40	64
(RNA_pol_Rpb1_1);(RNA_pol_Rpb1_5)	1	103	128	164	264	10	195	100	42	63
(RNA_pol_Rpb1_1);(RNA_pol_Rpb2_6)	1	463	639	492	741	10	388	90	44	94
(RNA_pol_Rpb1_1);(RNA_pol_Rpb2_7)	1	497	673	503	764	8	1536	90	43	99
(RNA_pol_Rpb1_1);(RNA_pol_Rpb5_C)	1	31	32	58	67	20	199	100	47	53
(RNA_pol_Rpb1_1);(SHS2_Rpb7-N)	1	67	73	128	155	8	223	100	64	52
(RNA_pol_Rpb1_1);(Sigma70_r1_2)	1	129	200	129	241	10	322	100	46	100
(RNA_pol_Rpb1_1);(Sigma70_r2)	1	144	223	145	268	10	766	100	48	99
(RNA_pol_Rpb1_1);(Sigma70_r3)	1	125	196	128	241	10	601	100	47	98
(RNA_pol_Rpb1_1);(Sigma70_r4)	1	66	138	117	227	33	139	100	72	56
(RNA_pol_Rpb1_1);(Spt5-NGN)	1	24	24	24	24	25	291	100	17	100
(RNA_pol_Rpb1_1);(TFIIE_alpha)	1	40	40	51	52	14	981	98	40	78
(RNA_pol_Rpb1_1);(TF_Zn_Ribbon)	1	50	54	55	60	21	279	100	30	91
(RNA_pol_Rpb1_2);(RNA_pol_Rpb1_3)	1	142	167	145	189	8	668	100	37	98
(RNA_pol_Rpb1_2);(RNA_pol_Rpb1_5)	1	144	170	154	199	12	222	100	38	94
(RNA_pol_Rpb1_2);(RNA_pol_Rpb2_6)	1	488	666	490	751	19	1274	91	44	100
(RNA_pol_Rpb1_2);(RNA_pol_Rpb2_7)	1	482	666	484	744	19	1401	90	45	100
(RNA_pol_Rpb1_2);(RNA_pol_Rpb6)	1	462	651	465	722	11	746	100	51	99
(RNA_pol_Rpb1_2);(SHS2_Rpb7-N)	1	40	44	188	246	26	193	100	75	21
(RNA_pol_Rpb1_2);(Sigma70_r3)	1	71	112	116	227	25	130	100	38	61
(RNA_pol_Rpb1_2);(TF_Zn_Ribbon)	1	54	58	54	59	21	459	100	28	100
(RNA_pol_Rpb1_3);(RNA_pol_Rpb1_4)	1	154	181	160	206	8	751	100	35	96
(RNA_pol_Rpb1_3);(RNA_pol_Rpb1_5)	1	153	179	158	203	8	220	100	37	97
(RNA_pol_Rpb1_3);(RNA_pol_Rpb2_6)	1	502	675	502	762	8	1032	90	42	100
(RNA_pol_Rpb1_3);(RNA_pol_Rpb6)	1	209	273	239	356	16	170	99	42	87
(RNA_pol_Rpb1_3);(RNA_pol_Rpb8)	1	191	280	192	322	28	1434	100	53	99
(RNA_pol_Rpb1_4);(RNA_pol_Rpb1_5)	1	159	186	167	215	9	539	100	35	95
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_2)	1	23	24	200	346	29	127	100	38	12
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_3)	1	244	361	498	753	9	250	99	53	49
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_45)	1	107	133	266	373	17	190	81	44	40
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_5)	1	160	248	161	291	5	398	100	44	99
(RNA_pol_Rpb1_4);(RNA_pol_Rpb2_6)	1	503	680	507	766	9	486	90	42	99
(RNA_pol_Rpb1_4);(RNA_pol_Rpb8)	1	33	34	155	283	25	131	100	65	21
(RNA_pol_Rpb1_4);(TFIIS_C)	1	115	198	143	273	36	533	95	48	80
(RNA_pol_Rpb1_4);(TFIIS_C)	2	29	33	143	273	24	275	91	45	20
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_3)	1	495	670	498	756	7	621	90	43	99
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_45)	1	278	358	287	411	16	179	81	39	97
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_5)	1	76	160	157	285	13	207	100	46	48
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_6)	1	208	305	501	759	19	386	100	49	42
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_6)	2	77	103	501	759	18	123	67	28	15
(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_7)	1	489	667	495	753	7	318	90	43	99
(RNA_pol_Rpb1_5);(RNA_pol_Rpb5_C)	1	202	312	202	333	26	1383	100	57	100
(RNA_pol_Rpb1_5);(RNA_pol_Rpb5_N)	1	82	125	189	317	31	124	100	62	43
(RNA_pol_Rpb1_5);(RNA_pol_Rpb6)	1	440	652	468	718	11	206	99	52	94
(RNA_pol_Rpb1_5);(TFIIS_C)	1	32	36	43	49	30	427	92	53	74
(RNA_pol_Rpb1_6);(RNA_pol_Rpb5_C)	1	116	223	117	243	35	578	100	57	99
(RNA_pol_Rpb1_6);(RNA_pol_Rpb6)	1	97	199	117	241	35	162	100	60	83
(RNA_pol_Rpb1_6);(RNA_pol_Rpb8)	1	50	54	107	221	33	349	100	28	47
(RNA_pol_Rpb1_7);(RNA_pol_Rpb2_2)	1	70	130	113	237	40	162	100	48	62
(RNA_pol_Rpb2_1);(RNA_pol_Rpb2_2)	1	128	146	150	196	14	476	98	18	85
(RNA_pol_Rpb2_1);(RNA_pol_Rpb2_3)	1	140	160	143	171	9	843	98	20	98
(RNA_pol_Rpb2_1);(RNA_pol_Rpb2_6)	1	136	154	147	176	9	412	99	19	93
(RNA_pol_Rpb2_1);(Sigma70_r3)	1	94	165	113	210	14	323	100	53	83
(RNA_pol_Rpb2_1);(TFIIB)	1	53	57	53	58	12	350	100	25	100
(RNA_pol_Rpb2_2);(RNA_pol_Rpb2_3)	1	143	166	147	188	9	381	98	23	97
(RNA_pol_Rpb2_2);(RNA_pol_Rpb2_45)	1	81	97	103	135	25	135	99	25	79
(RNA_pol_Rpb2_2);(RNA_pol_Rpb2_5)	1	35	42	36	46	78	134	100	19	97
(RNA_pol_Rpb2_2);(Sigma70_r1_2)	1	42	46	97	188	21	146	98	26	43
(RNA_pol_Rpb2_2);(TFIIF_alpha)	1	36	40	39	43	14	736	100	15	92
(RNA_pol_Rpb2_2);(TFIIS_C)	1	100	184	116	242	36	166	95	39	86
(RNA_pol_Rpb2_3);(RNA_pol_Rpb2_4)	1	45	54	46	58	61	361	100	30	98
(RNA_pol_Rpb2_3);(RNA_pol_Rpb2_5)	1	41	50	42	54	34	261	100	28	98
(RNA_pol_Rpb2_3);(RNA_pol_Rpb2_6)	1	96	110	153	196	56	381	97	20	63
(RNA_pol_Rpb2_3);(RNA_pol_Rpb2_6)	2	52	61	153	196	22	895	100	31	34
(RNA_pol_Rpb2_4);(RNA_pol_Rpb2_5)	1	41	50	42	54	33	1095	100	28	98
(RNA_pol_Rpb2_4);(RNA_pol_Rpc4)	1	30	30	30	30	21	283	100	50	100
(RNA_pol_Rpb2_6);(RNA_polI_A34)	1	36	40	36	40	89	621	100	68	100
(RNA_pol_Rpb2_6);(RNA_pol_Rpb2_7)	1	150	173	156	199	19	417	98	24	96
(RNA_pol_Rpb2_6);(Sigma70_r3)	1	127	206	128	241	14	558	100	50	99
(RNA_pol_Rpb2_6);(Sigma70_r4)	1	124	204	127	239	24	341	100	52	98
(RNA_pol_Rpb2_6);(TFIIB)	1	52	56	53	58	20	306	100	25	98
(RNA_pol_Rpb2_6);(TF_Zn_Ribbon)	1	54	58	54	59	21	653	100	24	100
(RNA_pol_Rpb2_7);(RNA_pol_Rpb6)	1	280	364	472	727	11	209	99	42	59
(RNA_pol_Rpb2_7);(S1)	1	31	33	77	91	72	189	100	33	40
(RNA_pol_Rpb2_7);(SHS2_Rpb7-N)	1	105	114	183	241	7	160	100	54	57
(RNA_pol_Rpb2_7);(Sigma70_r3)	1	116	195	122	234	20	227	100	52	95
(RNA_pol_Rpb4);(S1)	1	126	143	127	182	8	603	100	33	99
(RNA_pol_Rpb4);(SHS2_Rpb7-N)	1	160	173	160	214	8	759	100	36	100
(RNA_pol_Rpb5_C);(RNA_pol_Rpb5_N)	1	47	49	48	50	29	311	100	27	98
(RNA_pol_Rpb6);(SHS2_Rpb7-N)	1	195	214	196	255	7	367	100	43	99
(RNA_pol_Rpc34);(RNA_pol_Rpc82)	1	26	26	31	31	11	499	100	54	84
(RNase_H);(RVT_connect)	1	55	339	55	373	32	425	100	94	100
(RNase_H);(RVT_thumb)	1	56	336	56	366	32	609	90	85	100
(RRM_4);(SKIP_SNW)	1	33	33	34	34	32	250	91	9	97
(RVT_1);(RVT_connect)	1	56	340	56	374	38	874	100	94	100
(RVT_1);(RVT_connect)	2	55	338	56	374	37	343	100	93	98
(RVT_1);(RVT_connect)	3	53	333	56	374	37	121	100	94	95
(RVT_1);(RVT_thumb)	1	56	338	57	375	35	243	100	94	98
(RVT_connect);(RVT_thumb)	1	55	346	55	373	35	380	100	94	100
(Ras);(RhoGEF)	1	22	36	23	37	16	1152	97	97	96
(Rep_fac_C);(RFC1)	1	21	21	21	21	79	1156	100	5	100
(Rhv);(VP4_2)	1	33	40	36	46	9	339	98	42	92
(Ribonuc_red_lgC);(Ribonuc_red_lgN)	1	24	79	27	87	6	1365	99	94	89
(Ribos_L4_asso_C);(Ribosomal_L18)	1	281	290	286	299	15	955	91	15	98
(Ribos_L4_asso_C);(Ribosomal_L28e)	1	125	125	151	151	14	166	86	8	83
(Ribos_L4_asso_C);(Ribosomal_L30_N)	1	274	275	280	293	13	388	88	15	98
(Ribos_L4_asso_C);(Ribosomal_L6e_N)	1	113	113	117	117	19	316	100	4	97
(Ribosom_S12_S23);(Ribosomal_S17)	1	36	123	82	201	27	217	100	36	44
(Ribosom_S12_S23);(Ribosomal_S30)	1	286	287	292	305	40	404	100	9	98
(Ribosomal_L10);(Ribosomal_L11)	1	199	210	360	376	6	176	100	15	55
(Ribosomal_L10);(Ribosomal_L11)	2	101	101	360	376	39	157	100	12	28
(Ribosomal_L13);(Ribosomal_L20)	1	609	825	617	845	14	316	99	14	99
(Ribosomal_L13);(Ribosomal_L3)	1	597	813	914	1214	1	146	99	13	65
(Ribosomal_L13);(Ribosomal_L3)	2	277	316	914	1214	4	226	100	11	30
(Ribosomal_L13);(Ribosomal_L35Ae)	1	278	290	287	300	4	223	100	16	97
(Ribosomal_L13e);(Ribosomal_L18)	1	240	249	251	264	30	222	100	12	96
(Ribosomal_L13e);(Ribosomal_L27A)	1	268	269	268	281	30	1432	100	13	100
(Ribosomal_L13e);(Ribosomal_L36e)	1	267	268	267	280	24	541	100	13	100
(Ribosomal_L13e);(Ribosomal_L4)	1	274	275	275	288	30	201	100	15	100
(Ribosomal_L14);(Ribosomal_L19)	1	615	840	619	847	15	787	99	13	99
(Ribosomal_L14);(Ribosomal_L24e)	1	302	364	302	376	20	527	100	13	100
(Ribosomal_L14);(Ribosomal_L3)	1	673	939	820	1111	1	216	100	11	82
(Ribosomal_L14e);(Ribosomal_L18A)	1	241	242	286	299	8	122	100	17	84
(Ribosomal_L14e);(Ribosomal_L6e)	1	273	274	281	294	9	482	100	16	97
(Ribosomal_L15e);(Ribosomal_L36e)	1	274	287	283	296	24	527	100	15	97
(Ribosomal_L15e);(Ribosomal_L44)	1	257	297	268	341	25	159	100	20	96
(Ribosomal_L15e);(Ribosomal_L7Ae)	1	251	288	259	332	25	553	100	15	97
(Ribosomal_L16);(Ribosomal_L25p)	1	464	683	469	691	15	464	100	12	99
(Ribosomal_L16);(Ribosomal_L27)	1	134	223	394	588	24	249	99	9	34
(Ribosomal_L16);(Ribosomal_TL5_C)	1	104	212	106	295	15	393	100	11	98
(Ribosomal_L17);(Ribosomal_L22)	1	127	292	615	836	15	127	100	7	21
(Ribosomal_L17);(Ribosomal_L32p)	1	608	832	619	847	11	336	99	13	98
(Ribosomal_L18);(Ribosomal_L27A)	1	280	316	285	358	18	784	100	12	98
(Ribosomal_L18);(Ribosomal_L28e)	1	146	146	147	147	14	223	100	8	99
(Ribosomal_L18);(Ribosomal_L30)	1	253	262	256	269	38	249	100	12	99
(Ribosomal_L18);(Ribosomal_L4)	1	291	358	298	369	18	181	100	13	98
(Ribosomal_L18A);(Ribosomal_L30_N)	1	274	275	284	297	13	170	100	16	96
(Ribosomal_L18p);(Ribosomal_L27)	1	48	53	435	643	69	672	100	15	11
(Ribosomal_L18p);(Ribosomal_L27)	2	44	138	435	643	28	116	100	6	10
(Ribosomal_L19);(Ribosomal_L3)	1	428	472	612	837	1	605	99	16	70
(Ribosomal_L19);(Ribosomal_L3)	2	139	304	612	837	2	711	100	10	23
(Ribosomal_L2);(Ribosomal_L2_C)	1	54	54	57	62	18	1188	100	15	95
(Ribosomal_L2);(Ribosomal_L37ae)	1	281	321	282	355	20	474	100	11	100
(Ribosomal_L2);(Ribosomal_L9_C)	1	20	20	36	36	79	166	100	10	56
(Ribosomal_L20);(Ribosomal_L21p)	1	588	804	616	845	14	960	99	13	95
(Ribosomal_L20);(Ribosomal_L21p)	2	25	34	616	845	44	895	100	6	4
(Ribosomal_L20);(Ribosomal_L32p)	1	203	220	586	808	18	115	100	10	35
(Ribosomal_L21e);(Ribosomal_L29e)	1	248	249	248	261	27	485	100	11	100
(Ribosomal_L21e);(Ribosomal_L5e)	1	267	293	269	342	21	825	100	10	99
(Ribosomal_L22);(Ribosomal_L32p)	1	615	840	617	842	11	466	99	14	100
(Ribosomal_L22);(TGS)	1	59	64	59	64	1	349	100	14	100
(Ribosomal_L22);(Tim44)	1	58	63	59	64	86	187	100	14	98
(Ribosomal_L23);(Ribosomal_L29)	1	829	1103	845	1139	21	428	99	13	98
(Ribosomal_L23);(Ribosomal_L39)	1	278	337	284	355	31	227	100	11	98
(Ribosomal_L24e);(Ribosomal_L3)	1	290	349	291	364	20	248	100	13	100
(Ribosomal_L26);(Ribosomal_L4)	1	274	275	295	366	31	186	100	17	93
(Ribosomal_L27A);(Ribosomal_L35p)	1	582	781	602	831	18	777	99	12	97
(Ribosomal_L27A);(Ribosomal_L36e)	1	251	252	263	276	29	231	100	13	95
(Ribosomal_L27e);(Ribosomal_L34e)	1	265	266	270	283	22	341	100	13	98
(Ribosomal_L27e);(Ribosomal_L7Ae)	1	264	265	266	279	22	293	100	13	99
(Ribosomal_L28);(Ribosomal_L9_N)	1	453	640	493	682	5	230	100	11	92
(Ribosomal_L28);(Ribosomal_L9_N)	2	21	21	493	682	52	161	100	14	4
(Ribosomal_L28e);(Ribosomal_L32e)	1	151	151	153	153	13	717	100	9	99
(Ribosomal_L28e);(Ribosomal_L4)	1	152	152	153	153	13	714	100	9	99
(Ribosomal_L2_C);(Ribosomal_L37ae)	1	280	320	282	355	30	840	100	11	99
(Ribosomal_L2_C);(Ribosomal_L9_C)	1	167	167	239	239	29	149	100	13	70
(Ribosomal_L2_C);(Ribosomal_S6)	1	32	57	340	514	16	123	100	18	9
(Ribosomal_L3);(Ribosomal_L32p)	1	44	47	58	63	69	126	100	21	76
(Ribosomal_L31);(Ribosomal_L5)	1	321	476	349	516	5	238	99	12	92
(Ribosomal_L31);(Ribosomal_L5_C)	1	323	484	352	519	5	732	99	11	92
(Ribosomal_L31);(Ribosomal_S13)	1	211	355	250	410	18	361	99	12	84
(Ribosomal_L31);(Ribosomal_S19)	1	226	346	252	386	5	380	99	14	90
(Ribosomal_L32p);(TGS)	1	57	62	59	64	1	246	100	15	97
(Ribosomal_L33);(Ribosomal_L35p)	1	382	551	579	778	4	138	99	10	66
(Ribosomal_L34e);(Ribosomal_L7Ae)	1	269	270	271	284	23	225	100	13	99
(Ribosomal_L35Ae);(Ribosomal_L6e)	1	275	276	283	296	10	584	100	16	97
(Ribosomal_L36e);(Ribosomal_L7Ae)	1	232	233	237	250	24	254	100	17	98
(Ribosomal_L37ae);(Ribosomal_L7Ae)	1	267	280	272	285	26	161	100	12	98
(Ribosomal_L37ae);(Ribosomal_S3Ae)	1	36	38	48	61	59	133	100	18	75
(Ribosomal_L37e);(Ribosomal_L39)	1	259	320	277	350	33	188	100	10	94
(Ribosomal_L4);(Ribosomal_L50)	1	66	71	67	72	12	199	100	14	99
(Ribosomal_L40e);(Ribosomal_L6)	1	243	244	244	257	2	385	100	12	100
(Ribosomal_L5);(Ribosomal_L5_C)	1	29	32	29	32	25	1968	100	34	100
(Ribosomal_L5);(Stm1_N)	1	27	28	32	45	42	451	100	29	84
(Ribosomal_L5_C);(Ribosomal_L5e)	1	277	310	285	359	28	217	100	11	97
(Ribosomal_L5_C);(Ribosomal_S13)	1	289	440	610	822	24	256	100	10	47
(Ribosomal_L5_C);(Ribosomal_S13)	2	118	143	610	822	21	230	100	8	19
(Ribosomal_L5_C);(Ribosomal_S13)	3	83	83	610	822	34	154	100	1	14
(Ribosomal_L7Ae);(Ribosomal_S13_N)	1	57	57	111	111	31	119	100	0	51
(Ribosomal_L7Ae);(Ribosomal_S15)	1	98	98	162	162	1	226	100	1	60
(Ribosomal_L7Ae);(Ribosomal_S27)	1	270	271	278	291	20	537	100	10	97
(Ribosomal_L7Ae);(S10_plectin)	1	90	90	253	266	34	176	100	9	36
(Ribosomal_L7Ae);(S4)	1	31	31	35	35	41	209	100	3	89
(Ribosomal_L7Ae);(WD40)	1	30	30	46	46	43	217	100	3	65
(Ribosomal_L7Ae);(WD40)	2	23	23	46	46	48	186	100	4	50
(Ribosomal_L9_C);(Ribosomal_S6)	1	138	138	196	196	27	163	100	14	70
(Ribosomal_S10);(Ribosomal_S14)	1	865	1190	872	1209	11	775	100	13	99
(Ribosomal_S10);(Ribosomal_S9)	1	719	1023	861	1184	11	152	99	10	84
(Ribosomal_S11);(Ribosomal_S18)	1	292	583	452	753	48	262	100	8	65
(Ribosomal_S11);(Ribosomal_S21)	1	399	425	410	442	12	1033	100	12	97
(Ribosomal_S11);(Ribosomal_S26e)	1	271	284	271	284	38	1089	100	9	100
(Ribosomal_S11);(Ribosomal_S28e)	1	166	166	179	179	30	255	100	5	93
(Ribosomal_S11);(Ribosomal_S3Ae)	1	343	352	345	358	22	730	100	9	99
(Ribosomal_S11);(Ribosomal_S7)	1	569	853	750	1064	17	207	100	12	76
(Ribosomal_S11);(Ribosomal_S7)	2	25	28	750	1064	27	162	96	7	3
(Ribosomal_S13);(Ribosomal_S19)	1	800	1119	827	1161	14	384	100	10	97
(Ribosomal_S13);(Ribosomal_S19e)	1	306	319	316	329	25	436	100	10	97
(Ribosomal_S13);(Ribosomal_S25)	1	278	291	295	308	19	188	100	10	94
(Ribosomal_S13);(Stm1_N)	1	24	25	32	45	66	293	100	32	75
(Ribosomal_S13_N);(Ribosomal_S27e)	1	339	348	343	356	26	480	100	9	99
(Ribosomal_S13_N);(Ribosomal_S7e)	1	312	313	325	338	12	182	100	9	96
(Ribosomal_S13_N);(Ribosomal_S8)	1	199	199	335	348	26	181	100	8	59
(Ribosomal_S13_N);(Ribosomal_S8)	2	127	128	335	348	28	195	100	11	38
(Ribosomal_S14);(Ribosomal_S19)	1	310	334	358	397	25	152	100	13	87
(Ribosomal_S14);(S10_plectin)	1	272	285	277	290	20	289	100	9	98
(Ribosomal_S17);(Ribosomal_S8)	1	452	746	858	1174	20	136	100	13	53
(Ribosomal_S17);(Ribosomal_S8)	2	184	185	858	1174	25	127	100	11	21
(Ribosomal_S17);(Ribosomal_S8e)	1	259	260	339	352	26	136	97	9	76
(Ribosomal_S17_N);(Ribosomal_S8e)	1	329	330	334	347	40	264	100	8	99
(Ribosomal_S17e);(Ribosomal_S2)	1	256	265	259	272	27	675	100	11	99
(Ribosomal_S17e);(WD40)	1	267	268	269	282	15	137	100	9	99
(Ribosomal_S18);(Ribosomal_S21)	1	201	208	402	433	12	182	99	9	50
(Ribosomal_S18);(Ribosomal_S21)	2	155	159	402	433	37	201	100	15	39
(Ribosomal_S18);(Ribosomal_S6)	1	584	889	592	909	10	785	99	10	99
(Ribosomal_S19);(Stm1_N)	1	25	26	32	45	51	165	100	27	78
(Ribosomal_S19e);(Ribosomal_S9)	1	305	318	317	330	24	207	100	10	96
(Ribosomal_S2);(Ribosomal_S21e)	1	261	270	262	275	3	1203	100	11	100
(Ribosomal_S2);(Ribosomal_S8)	1	101	379	166	449	40	260	99	5	61
(Ribosomal_S21e);(Ribosomal_S5)	1	287	288	289	302	7	222	100	10	99
(Ribosomal_S21e);(Ribosomal_S5_C)	1	292	293	292	305	7	517	100	10	100
(Ribosomal_S21e);(Ribosomal_S8)	1	283	296	291	304	7	244	100	10	97
(Ribosomal_S24e);(S4)	1	340	353	347	360	10	176	99	9	98
(Ribosomal_S25);(Ribosomal_S7)	1	295	308	296	309	19	588	100	10	100
(Ribosomal_S26e);(Ribosomal_S28e)	1	150	156	250	263	42	141	100	10	60
(Ribosomal_S26e);(Ribosomal_S3Ae)	1	267	276	271	284	32	239	100	9	99
(Ribosomal_S28e);(Ribosomal_S7)	1	346	347	348	361	30	976	100	9	99
(Ribosomal_S30);(Ribosomal_S4)	1	222	222	222	222	39	382	100	10	100
(Ribosomal_S30);(S4)	1	281	282	292	305	40	154	100	10	96
(Ribosomal_S3_C);(Ribosomal_S5)	1	200	221	726	1046	19	135	99	11	28
(Ribosomal_S4);(Ribosomal_S5_C)	1	364	667	767	1082	12	143	100	16	47
(Ribosomal_S4);(Ribosomal_S5_C)	2	231	231	767	1082	31	219	73	6	30
(Ribosomal_S4);(Ribosomal_S6)	1	29	81	35	121	86	152	2	0	83
(Ribosomal_S4);(Ribosomal_S8)	1	83	83	216	216	34	121	75	7	38
(Ribosomal_S4);(S4)	1	61	61	63	65	7	667	100	33	97
(Ribosomal_S5_C);(Ribosomal_S8)	1	537	848	859	1186	16	461	99	14	63
(Ribosomal_S5_C);(Ribosomal_S8)	2	304	305	859	1186	26	340	100	10	35
(Ribosomal_S7);(Ribosomal_S9)	1	876	1189	901	1234	17	312	100	11	97
(Ribosomal_S7);(S1)	1	20	20	22	22	78	579	100	15	91
(Ribosomal_S7e);(Ribosomal_S8)	1	334	347	336	349	12	473	100	9	99
(Ribosomal_S9);(WD40)	1	268	269	314	327	23	253	100	9	85
(Ribosomal_S9);(WD40)	2	30	30	314	327	40	294	100	3	10
(Ricin_B_lectin);(RIP)	1	21	48	21	50	19	377	100	98	100
(Rieske);(Ring_hydroxyl_A)	1	24	43	24	69	12	1176	93	93	100
(RuBisCO_large);(RuBisCO_large_N)	1	58	120	60	122	11	1529	99	83	97
(RuBisCO_large);(RuBisCO_large_N)	2	48	99	60	122	11	1127	100	88	80
(RuBisCO_large);(RuBisCO_small)	1	28	67	28	67	26	1329	99	81	100
(RuBisCO_large);(RuBisCO_small)	2	26	65	28	67	26	813	94	78	93
(RuBisCO_large_N);(RuBisCO_small)	1	27	66	28	67	26	325	95	79	96
(S-AdoMet_synt_C);(S-AdoMet_synt_M)	1	33	91	33	91	30	298	100	98	100
(S-AdoMet_synt_C);(S-AdoMet_synt_M)	2	33	91	33	91	30	1767	100	98	100
(S-AdoMet_synt_C);(S-AdoMet_synt_N)	1	33	91	33	91	36	451	100	98	100
(S-AdoMet_synt_C);(S-AdoMet_synt_N)	2	32	89	33	91	36	1589	100	98	97
(S-AdoMet_synt_M);(S-AdoMet_synt_N)	1	33	91	33	91	30	152	100	98	100
(S-AdoMet_synt_M);(S-AdoMet_synt_N)	2	32	89	33	91	30	924	100	98	97
(S1);(TF_Zn_Ribbon)	1	36	40	36	40	29	515	100	28	100
(S4);(WD40)	1	32	32	37	37	38	205	100	3	86
(S4);(WD40)	2	23	23	37	37	7	188	100	0	62
(SKIP_SNW);(WD40)	1	37	37	38	38	32	251	89	11	97
(SRP54);(SRP54_N)	1	49	73	53	77	8	760	95	92	92
(Sec61_beta);(SecE)	1	22	22	36	38	17	150	100	23	61
(Sec61_beta);(SecY)	1	38	40	38	40	17	459	95	30	100
(SecE);(SecY)	1	57	59	59	61	7	1320	97	37	97
(Semialdhyde_dh);(Semialdhyde_dhC)	1	41	80	41	81	7	903	100	100	100
(Seryl_tRNA_N);(tRNA-synt_2b)	1	24	41	24	42	10	466	95	90	100
(Shikimate_DH);(Shikimate_dh_N)	1	28	37	28	37	12	265	89	89	100
(Sigma70_r1_2);(Sigma70_r2)	1	48	61	50	67	27	720	100	52	96
(Sigma70_r2);(Sigma70_r3)	1	31	33	44	60	51	137	100	33	70
(Skp1);(Skp1_POZ)	1	37	50	38	55	29	136	94	80	97
(Skp1_POZ);(VHL_C)	1	27	66	28	68	30	123	95	83	96
(Skp1_POZ);(ubiquitin)	1	51	93	52	95	22	669	95	74	98
(Sld5);(SLD5_C)	1	25	26	25	26	26	497	100	46	100
(Sld5);(SLD5_C)	2	20	21	25	26	10	267	100	33	80
(Sod_Fe_C);(Sod_Fe_N)	1	94	183	94	183	5	266	95	87	100
(Sod_Fe_C);(Sod_Fe_N)	2	84	173	94	183	12	1152	99	97	89
(Sod_Fe_C);(Sod_Fe_N)	3	22	43	94	183	24	179	0	0	23
(Spt4);(Spt5-NGN)	1	30	30	30	30	19	852	100	37	100
(Ssl1);(Tfb4)	1	31	34	37	40	28	485	97	35	84
(SusD_RagB);(SusD-like_3)	1	43	49	43	49	1	2942	96	88	100
(Sushi);(Trypsin)	1	20	21	28	31	21	198	100	100	71
(Synaptobrevin);(Syntaxin)	1	29	32	29	33	4	758	91	66	100
(TAF);(TFIID-31kDa)	1	28	28	28	28	65	1655	100	18	100
(TAF4);(TFIID_20kDa)	1	21	21	21	21	71	1834	100	10	100
(TBP);(TFIIA_gamma_C)	1	21	23	21	23	43	435	100	39	100
(TBP);(TFIIB)	1	53	59	54	60	5	347	100	36	98
(TBP);(TFIIB)	2	38	42	54	60	84	263	100	36	70
(TFIIE_beta);(TFIIF_beta)	1	25	29	32	36	65	384	100	31	78
(THF_DHG_CYH);(THF_DHG_CYH_C)	1	22	43	22	43	17	1622	98	98	100
(TNF);(TNFR_c6)	1	26	31	29	38	7	363	87	81	90
(TNF);(TNFR_c6)	2	26	31	29	38	7	251	87	81	90
(TPP_enzyme_C);(TPP_enzyme_M)	1	69	183	70	189	9	681	100	98	99
(TPP_enzyme_C);(TPP_enzyme_N)	1	78	213	78	218	10	875	99	98	100
(TPP_enzyme_C);(TPP_enzyme_N)	2	25	63	78	218	24	959	100	95	32
(TPP_enzyme_M);(TPP_enzyme_N)	1	66	167	70	189	9	300	100	98	94
(TPP_enzyme_M);(TPP_enzyme_N)	2	46	147	70	189	11	307	98	98	66
(TPP_enzyme_M);(TPP_enzyme_N)	3	34	106	70	189	12	317	98	99	49
(TPR_1);(TPR_11)	1	31	41	42	53	4	344	98	90	74
(Terpene_synth);(Terpene_synth_C)	1	28	82	28	82	15	1031	95	95	100
(TetR_C_6);(TetR_N)	1	25	40	26	41	6	408	100	100	96
(Tfb2);(Tfb4)	1	31	34	36	39	20	1080	97	35	86
(ThiF);(UBA_e1_thiolCys)	1	20	23	27	33	6	1844	91	78	74
(Thiolase_C);(Thiolase_N)	1	71	144	71	147	2	2760	99	96	100
(Thiolase_C);(Thiolase_N)	2	66	137	71	147	8	394	99	96	93
(Thrombin_light);(Trypsin)	1	123	468	123	485	31	970	99	97	100
(Topoisom_bac);(Toprim)	1	22	37	22	40	17	1515	100	100	100
(Toxin_R_bind_C);(Toxin_R_bind_N)	1	65	103	71	109	12	1185	100	88	92
(Transket_pyr);(Transketolase_C)	1	43	120	43	125	7	302	98	97	100
(Transket_pyr);(Transketolase_C)	2	39	89	43	125	8	1142	98	97	91
(Tubulin);(Tubulin_C)	1	259	530	271	545	1	596	95	59	96
(UCR_14kD);(UcrQ)	1	49	86	49	87	20	445	100	69	100
(UCR_6-4kD);(UCR_UQCRX_QCR9)	1	22	33	22	35	34	504	100	52	100
(UCR_TM);(UCR_UQCRX_QCR9)	1	45	72	46	82	24	618	100	67	98
(UCR_TM);(UcrQ)	1	46	73	47	83	20	563	100	66	98
(UCR_hinge);(UcrQ)	1	48	79	49	87	20	222	100	66	98
(UQ_con);(zf-RING_2)	1	22	22	22	22	19	524	91	27	100
(Utp12);(Utp13)	1	37	37	37	37	36	1697	57	8	100
(Utp12);(Utp13)	2	31	31	37	37	31	320	81	6	84
(Utp12);(Utp21)	1	36	36	36	36	31	1689	56	6	100
(Utp12);(Utp21)	2	31	31	36	36	34	227	77	6	86
(Utp13);(Utp21)	1	35	35	36	36	34	361	57	6	97
(UvrD_C);(UvrD-helicase)	1	26	35	27	37	11	1951	100	83	96
(V-ATPase_C);(V-ATPase_G)	1	28	29	34	35	31	267	100	7	82
(V-ATPase_G);(vATP-synt_E)	1	51	52	51	52	31	1626	100	4	100
(V-ATPase_G_2);(vATP-synt_E)	1	33	33	34	34	84	1292	100	21	97
(V-ATPase_H_N);(vATP-synt_E)	1	22	22	33	33	17	410	100	0	67
(V-set);(V-set_2)	1	309	354	333	380	14	810	99	87	93
(V-set);(WD40)	1	170	170	351	351	35	285	83	3	48
(V-set);(WD40)	2	167	167	351	351	35	138	84	4	48
(V-set);(WD40)	3	149	149	351	351	59	108	62	3	42
(V_ATPase_I);(V-ATPase_C)	1	37	37	38	38	36	352	100	0	97
(V_ATPase_I);(V-ATPase_H_C)	1	26	26	29	29	34	455	100	0	90
(V_ATPase_I);(V-ATPase_H_N)	1	23	23	32	32	17	383	100	0	72
(cNMP_binding);(HTH_Crp_2)	1	49	99	65	119	8	368	99	97	75
(dsrm);(MRP-S32)	1	59	64	59	64	68	660	100	16	100
(dsrm);(Ribosomal_L13)	1	61	66	68	73	25	158	100	14	90
(eIF-1a);(Ribosom_S12_S23)	1	47	47	54	54	20	339	100	15	87
(eIF-1a);(Ribosomal_S30)	1	30	30	34	34	19	301	100	10	88
(eIF-6);(NOGCT)	1	31	31	31	31	35	745	100	48	100
(eIF-6);(Ribosomal_L14)	1	53	53	57	57	66	743	100	47	93
(eIF-6);(Ribosomal_L24e)	1	43	43	53	53	29	179	100	53	81
(eIF-6);(Ribosomal_L3)	1	50	50	56	56	57	213	100	50	89
(fn3);(IL6Ra-bind)	1	21	21	27	28	10	377	81	67	78
(ketoacyl-synt);(Ketoacyl-synt_C)	1	113	184	117	194	11	2003	99	86	97
(ketoacyl-synt);(Ketoacyl-synt_C)	2	99	174	117	194	4	527	97	87	85
(malic);(Malic_M)	1	21	43	21	43	13	1160	100	100	100
(ribosomal_L24);(Tim44)	1	56	61	56	61	86	359	100	15	100
(tRNA_anti-codon);(tRNA-synt_2)	1	55	103	55	103	11	319	88	94	100
(tRNA_anti-codon);(tRNA-synt_2)	2	50	97	55	103	11	200	93	93	91
(ubiquitin);(UCH)	1	55	63	58	68	12	1068	98	68	95
(ubiquitin);(UQ_con)	1	52	61	83	98	23	611	98	52	63
(zf-C2H2);(zf-H2C2_2)	1	62	104	64	111	14	635	95	75	97
(RNA_pol_Rpb2_3);(RNA_pol_Rpb2_45)	1	97	113	100	131	44	350	97	22	97
(NusG);(RNA_pol_Rpb2_2)	1	46	46	48	48	18	250	100	4	96
(NusG);(RNA_pol_Rpb2_1)	1	31	31	48	48	18	198	100	6	65
(NusG);(RNA_pol_Rpb1_1)	1	47	47	49	49	18	577	100	4	96
(ATP-synt_A);(ATP-synt_B)	1	57	58	57	58	13	821	100	5	100
(ATP-synt_A);(ATP-synt_B)	2	54	55	57	58	16	1186	100	5	95
(ATP-synt_B);(OSCP)	1	28	29	42	43	16	161	100	7	67
(ATP-synt_B);(OSCP)	2	27	27	42	43	13	270	100	4	64
(PSP);(RRM_1)	1	27	27	27	27	35	699	59	19	100
(NADHdh_A3);(Oxidored_q4)	1	100	100	102	102	12	338	100	15	98
(MWFE);(NADHdh)	1	106	106	106	106	20	1499	100	14	100
(MWFE);(Oxidored_q3)	1	95	95	105	105	14	231	100	13	90
(CHCH);(MWFE)	1	105	105	106	106	20	311	99	12	99
(GRIM-19);(MWFE)	1	102	102	102	102	20	276	100	15	100
(NDUFA12);(Oxidored_q6)	1	98	98	101	101	30	159	100	15	97
(NADHdh);(NADHdh_A3)	1	102	102	102	102	12	387	100	15	100
(GRIM-19);(NADHdh_A3)	1	92	92	98	98	15	567	100	16	94
(Complex1_30kDa);(ETC_C1_NDUFA5)	1	102	102	103	103	25	213	99	15	99
(Complex1_30kDa);(Complex1_LYR)	1	101	101	102	102	16	452	100	16	99
(NADH_dh_m_C1);(NDUF_C2)	1	86	86	86	86	53	865	100	14	100
(Complex1_49kDa);(zf-CHCC)	1	104	104	105	105	43	208	100	14	99
(Complex1_49kDa);(GRIM-19)	1	100	100	100	100	36	934	100	13	100
(NDUF_C2);(Ndufs5)	1	78	78	84	84	70	135	100	12	93
(NDUF_C2);(Proton_antipo_M)	1	100	100	101	101	9	172	100	15	99
(NDUF_C2);(Proton_antipo_M)	2	76	76	101	101	70	206	100	11	75
(NADH_dehy_S2_C);(NDUF_C2)	1	88	88	88	88	44	796	98	12	100
(NDUF_C2);(NDUFB10)	1	67	67	83	83	70	736	100	12	81
(2Fe-2S_thioredx);(Fer4_10)	1	26	26	26	26	62	470	100	27	100
(Ndufs5);(Oxidored_q3)	1	97	97	106	106	14	697	100	14	92
(Ndufs5);(Oxidored_q2)	1	106	106	106	106	18	498	100	14	100
(Ndufs5);(Proton_antipo_M)	1	104	104	105	105	16	711	100	14	99
(GRIM-19);(Ndufs5)	1	105	105	105	105	20	1135	100	14	100
(Fer4_10);(NADH_4Fe-4S)	1	26	26	26	26	68	296	96	23	100
(NADH_oxidored);(Oxidored_q5_N)	1	87	87	87	87	54	730	100	14	100
(NADH_oxidored);(NDUFB10)	1	64	64	87	87	71	309	100	12	74
(NADH-G_4Fe-4S_3);(zf-CHCC)	1	103	103	105	105	33	190	100	15	98
(ESSS);(NDUF_B5)	1	87	87	87	87	42	895	100	14	100
(ESSS);(Oxidored_q5_N)	1	91	91	91	91	1	938	100	13	100
(dNK);(ESSS)	1	54	54	73	73	79	151	100	13	74
(ESSS);(NDUFB10)	1	72	72	89	89	50	1053	100	17	81
(CHCH);(NADHdh)	1	86	86	102	102	76	214	100	14	84
(GRIM-19);(NADHdh)	1	106	106	106	106	34	571	100	14	100
(NDUF_B5);(NDUF_B6)	1	82	82	87	87	36	249	100	11	94
(NDUF_B5);(Proton_antipo_M)	1	88	88	88	88	16	538	100	14	100
(NDUF_B5);(Proton_antipo_M)	2	79	79	88	88	51	301	100	11	90
(Fer4_7);(NDUFA12)	1	90	90	101	101	35	168	89	17	89
(Fer4_7);(zf-CHCC)	1	102	102	105	105	40	226	100	15	97
(NDUF_B6);(PP-binding)	1	86	86	87	87	46	354	100	13	99
(GRIM-19);(Oxidored_q3)	1	102	102	105	105	14	457	100	15	97
(NADH5_C);(NDUF_B4)	1	99	99	100	100	13	598	93	12	99
(NDUF_B4);(Proton_antipo_M)	1	100	100	100	100	13	1003	100	15	100
(NDUF_B4);(Proton_antipo_M)	2	83	83	100	100	74	240	100	14	83
(Complex1_LYR);(NADH5_C)	1	101	101	104	104	15	461	100	15	97
(Complex1_LYR);(Proton_antipo_M)	1	62	62	101	101	15	125	84	15	61
(NADH5_C);(NDUF_B7)	1	98	98	103	103	16	624	70	11	95
(NDUFB10);(Proton_antipo_M)	1	83	83	99	99	7	483	100	18	84
(NDUFB10);(Proton_antipo_M)	2	83	83	99	99	74	428	100	14	84
(NDUFB10);(Proton_antipo_N)	1	69	69	99	99	53	273	100	17	70
(NADH5_C);(PP-binding)	1	92	92	103	103	18	127	70	8	89
(NADH5_C);(Tim17)	1	78	78	91	91	46	440	100	14	86
(NADH_dehy_S2_C);(Proton_antipo_M)	1	85	85	88	88	44	447	100	14	97
(Oxidored_q5_N);(Proton_antipo_M)	1	44	44	125	125	5	249	98	9	35
(NDUFB10);(Oxidored_q5_N)	1	68	68	99	99	54	161	100	18	69
(Complex1_LYR);(NDUF_B4)	1	62	62	84	84	74	462	100	15	74
(NDUF_B4);(NDUFB10)	1	68	68	95	95	73	369	100	18	72
(dNK);(NADH_dehy_S2_C)	1	87	87	88	88	44	409	100	13	99
(Complex1_LYR);(PP-binding)	1	142	150	145	153	9	605	100	19	98
(dNK);(ETC_C1_NDUFA5)	1	24	24	69	69	79	268	100	12	35
(CHCH);(GRIM-19)	1	102	102	105	105	21	204	89	15	97
(CHCH);(GRIM-19)	2	50	50	105	105	21	557	100	16	48
(CPSF_A);(DUF382)	1	23	23	27	27	24	406	83	9	85
(MMS1_N);(PHF5)	1	31	35	35	39	27	432	86	26	89
(MMS1_N);(SF3b10)	1	37	41	37	41	24	1195	88	29	100
(CPSF_A);(SF3b10)	1	29	33	34	38	24	401	85	33	85
(ATP_synt_H);(V_ATPase_I)	1	45	45	45	45	22	1567	100	0	100
(CLZ);(cNMP_binding)	1	21	21	21	21	77	390	100	5	100
(ATP-synt_ab_C);(ATP-synt_B)	1	20	20	32	32	12	181	100	5	62
(Complex1_51K);(NDUFV3)	1	82	82	82	82	64	910	100	12	100
(Complex1_51K);(ETC_C1_NDUFA4)	1	102	102	102	102	35	365	100	12	100
(CI-B14_5a);(NADH_4Fe-4S)	1	80	80	83	83	81	215	100	12	96
(2Fe-2S_thioredx);(NDUFV3)	1	82	82	82	82	63	587	100	12	100
(2Fe-2S_thioredx);(ETC_C1_NDUFA4)	1	30	30	98	98	35	213	100	17	31
(Complex1_LYR);(NDUF_B12)	1	77	77	82	82	15	241	100	14	94
(NADH_B2);(NDUF_B12)	1	95	95	96	96	6	711	100	12	99
(NADH5_C);(NDUF_B12)	1	97	97	99	99	18	484	97	9	98
(NDUF_B12);(Proton_antipo_M)	1	95	95	96	96	21	309	100	12	99
(NDUF_B12);(PP-binding)	1	94	94	98	98	38	372	100	12	96
(ETC_C1_NDUFA4);(Molybdopterin)	1	102	102	102	102	30	419	100	12	100
(ETC_C1_NDUFA4);(Molybdop_Fe4S4)	1	77	77	77	77	28	655	100	12	100
(ETC_C1_NDUFA4);(NADH-G_4Fe-4S_3)	1	99	99	101	101	35	185	87	10	98
(ETC_C1_NDUFA4);(Fer2_4)	1	83	83	100	100	35	524	100	14	83
(L51_S25_CI-B8);(Molybdopterin)	1	103	103	103	103	30	530	97	13	100
(L51_S25_CI-B8);(NADH_dhqG_C)	1	98	98	102	102	30	385	97	13	96
(CI-B14_5a);(NADH-G_4Fe-4S_3)	1	80	80	83	83	61	362	100	12	96
(Molybdopterin);(NDUFA12)	1	96	96	97	97	3	506	100	12	99
(Molybdop_Fe4S4);(NDUFA12)	1	44	44	73	73	35	140	100	14	60
(NDUF_B4);(NDUF_C2)	1	67	67	78	78	70	147	100	7	86
(NDUF_B5);(NDUF_C2)	1	81	81	81	81	70	505	100	11	100
(CI-B14_5a);(Complex1_49kDa)	1	83	83	83	83	81	1214	100	12	100
(NDUF_B4);(NDUF_B8)	1	91	91	91	91	13	1724	100	12	100
(Complex1_30kDa);(ETC_C1_NDUFA4)	1	102	102	102	102	35	440	100	12	100
(CI-B14_5a);(Complex1_30kDa)	1	83	83	83	83	81	299	100	12	100
(GRIM-19);(NDUF_B5)	1	39	39	83	83	79	114	100	15	47
(CI-B14_5a);(GRIM-19)	1	82	82	83	83	45	338	100	12	99
(NAD_binding_10);(Oxidored_q6)	1	25	25	25	25	32	287	96	24	100
(NDUF_B6);(NDUF_B7)	1	83	83	83	83	57	731	100	10	100
(NDUF_B6);(NDUFB10)	1	83	83	83	83	57	575	100	10	100
(ETC_C1_NDUFA4);(Fer4_7)	1	97	97	99	99	35	155	100	12	98
(NADH_B2);(NDUF_B7)	1	95	95	95	95	6	324	100	12	100
(NDUF_B7);(NDUF_B8)	1	83	83	91	91	22	850	100	12	91
(NDUF_B7);(NDUFB10)	1	69	69	94	94	7	237	100	16	73
(NADH_B2);(NADH5_C)	1	95	95	96	96	6	979	100	12	99
(NADH_B2);(Proton_antipo_M)	1	96	96	96	96	6	641	100	11	100
(NADH_B2);(PP-binding)	1	73	73	81	81	63	140	100	11	90
(NDUF_B8);(Proton_antipo_M)	1	91	91	91	91	20	764	100	12	100
(NDUF_B8);(Proton_antipo_M)	2	81	81	91	91	22	288	100	14	89
(NADH5_C);(NDUF_B8)	1	90	90	91	91	18	901	69	7	99
(NDUF_B8);(PP-binding)	1	36	36	91	91	22	112	100	8	40
(NDUF_B5);(Oxidored_q5_N)	1	84	84	85	85	54	449	100	11	99
(dNK);(NADH_dh_m_C1)	1	61	61	69	69	71	179	100	15	88
(NADH_oxidored);(NDUF_B5)	1	84	84	84	84	71	641	100	11	100
(NDUF_B5);(NDUFB10)	1	69	69	85	85	76	1092	100	13	81
(ETC_C1_NDUFA4);(NDUFA12)	1	87	87	96	96	30	151	100	11	91
(NDUF_B5);(Ndufs5)	1	85	85	85	85	71	978	100	11	100
(CI-B14_5a);(ETC_C1_NDUFA5)	1	81	81	83	83	78	261	100	12	98
(CI-B14_5a);(NDUFA12)	1	82	82	83	83	80	383	100	12	99
(Methyltransf_25);(PRMT5_C)	1	33	119	33	127	2	713	96	92	100
(Spermine_synt_N);(Spermine_synth)	1	29	64	29	64	12	1028	100	100	100
(Binary_toxB_2);(Binary_toxB_3)	1	38	52	39	53	28	346	90	54	97
(Binary_toxB);(Binary_toxB_3)	1	38	52	39	53	27	627	90	54	97
(Binary_toxB);(Binary_toxB_3)	2	21	21	39	53	32	394	81	33	54
(Binary_toxB);(Binary_toxB_2)	1	38	52	38	52	30	386	90	54	100
(Binary_toxB);(Binary_toxB_2)	2	20	20	38	52	40	131	80	35	53
(Phage_sheath_1);(Phage_sheath_1C)	1	20	20	26	26	4	901	65	20	77
(Arena_RNA_pol);(ArenaCapSnatch)	1	22	26	23	27	20	1286	85	19	96
(Nrap_D4);(RRP7)	1	31	31	31	31	20	514	100	0	100
(TAF);(WD40)	1	26	26	31	31	31	161	100	15	84
(7tm_2);(G-alpha)	1	104	104	105	105	16	372	81	0	99
(7tm_2);(Hormone_2)	1	39	39	39	39	11	1079	85	3	100
(Utp21);(WD40)	1	24	24	32	32	34	198	100	4	75
(Utp13);(WD40)	1	29	29	34	34	37	145	100	3	85
(Fcf1);(Fibrillarin)	1	32	32	33	33	63	395	100	3	97
(MMR_HSR1);(Ribosom_S12_S23)	1	30	30	34	34	50	183	100	3	88
(RTC_insert);(WD40)	1	29	29	33	33	38	244	100	3	88
(Brix);(WD40)	1	27	27	34	34	48	135	100	4	79
(Ribosomal_S7);(WD40)	1	27	27	32	32	37	200	100	4	84
(Mpp10);(S4)	1	24	24	29	29	38	205	100	4	83
(RIBIOP_C);(Ribosom_S12_S23)	1	51	51	53	53	17	578	100	12	96
(RIBIOP_C);(RTC)	1	33	33	35	35	35	635	100	3	94
(Mpp10);(Ribosomal_S4)	1	31	31	33	33	34	723	100	6	94
(Ribosomal_S28e);(Utp12)	1	34	34	34	34	36	433	100	3	100
(Mpp10);(WD40)	1	32	32	33	33	20	278	100	3	97
(Mpp10);(WD40)	2	24	24	33	33	76	139	100	4	73
(Mpp10);(WD40)	3	20	20	33	33	25	433	100	5	61
(NDUF_B8);(NDUFB10)	1	66	66	84	84	7	140	100	15	79
(MWFE);(Ndufs5)	1	40	40	41	41	71	153	100	15	98
(NusA_N);(RNA_pol_Rpb2_6)	1	21	21	29	29	51	674	100	19	72
(Cas_Csy1);(Cas_Csy3)	1	33	33	34	34	7	222	73	3	97
(Cas_Csy2);(Cas_Csy3)	1	34	34	34	34	8	1777	74	3	100
(AAA);(AAA_16)	1	23	23	23	23	18	475	65	4	100
(ABC_tran);(FtsX)	1	20	25	20	25	32	647	100	52	100
(C1_4);(Tfb4)	1	34	37	34	37	26	780	97	41	100
(Brix);(Mpp10)	1	34	34	35	35	36	1120	100	6	97
(Complex1_LYR);(RsfS)	1	25	28	25	28	72	605	100	21	100
(Ribosomal_L14);(RsfS)	1	32	35	32	35	23	855	100	29	100
(Ribosomal_L19);(RsfS)	1	26	29	28	31	23	237	100	28	93
(BSD);(Ssl1)	1	25	25	28	31	16	289	96	28	89
(TFIIE_alpha);(zf-C3HC4_5)	1	20	21	20	21	71	255	100	43	100
(HBB);(MAT1)	1	27	30	27	30	27	794	97	33	100
(BING4CT);(Ribosomal_S4)	1	28	28	30	30	46	315	100	4	93
(Fcf2);(Sas10)	1	29	29	31	31	36	289	100	3	94
(Fcf1);(Sas10)	1	25	25	31	31	63	170	100	4	81
(Fibrillarin);(Sas10)	1	31	31	31	31	63	1105	100	3	100
(S4);(Sas10)	1	30	30	31	31	56	147	100	3	97
(Ribosomal_S4);(Sas10)	1	27	27	27	27	56	292	100	4	100
(Ribosom_S12_S23);(Sas10)	1	30	30	34	34	63	177	100	3	88
(RIBIOP_C);(Sas10)	1	30	30	33	33	63	313	100	3	91
(Mpp10);(Utp13)	1	32	32	32	32	36	698	100	3	100
(Mpp10);(RIBIOP_C)	1	34	34	34	34	36	1237	68	3	100
(Fibrillarin);(WD40)	1	31	31	31	31	21	269	100	3	100
(Fcf1);(WD40)	1	25	25	27	27	54	310	100	4	93
(Fcf1);(WD40)	2	22	22	27	27	43	274	100	5	81
(Ribosomal_S7e);(WD40)	1	23	23	25	25	43	189	100	4	92
(NOP5NT);(WD40)	1	25	25	26	26	36	168	100	4	96
(NOP5NT);(Sof1)	1	31	31	31	31	39	305	100	3	100
(Ribosomal_S8);(WD40)	1	23	23	23	23	7	136	100	4	100
(Fibrillarin);(Utp11)	1	29	29	29	29	27	1068	100	3	100
(Nop);(Utp11)	1	26	26	28	28	27	278	100	4	93
(Ribosomal_L7Ae);(Utp11)	1	28	28	29	29	27	528	100	4	97
(RIBIOP_C);(Utp11)	1	31	31	31	31	27	586	100	3	100
(Fcf2);(Fibrillarin)	1	31	31	31	31	36	1063	100	3	100
(Herpes_V23);(Herpes_VP19C)	1	30	30	30	30	9	970	93	0	100
(Herpes_MCP);(Herpes_V23)	1	27	27	27	27	14	733	93	0	100
(Herpes_MCP);(Herpes_V23)	2	26	26	27	27	14	613	92	0	96
(Herpes_MCP);(Herpes_V23)	3	24	24	27	27	14	533	92	0	89
(Herpes_MCP);(Herpes_VP19C)	1	29	29	30	30	9	469	93	0	97
(Herpes_MCP);(Herpes_VP19C)	2	25	25	30	30	9	829	92	0	83
(Herpes_MCP);(Herpes_VP19C)	3	20	20	30	30	9	425	90	0	67
(U3_snoRNA_assoc);(Utp11)	1	25	25	25	25	17	615	100	4	100
(U3_snoRNA_assoc);(WD40)	1	24	24	26	26	17	454	100	4	92
(U3_snoRNA_assoc);(WD40)	2	22	22	26	26	10	170	100	5	85
(U3_snoRNA_assoc);(WD40)	3	22	22	26	26	17	314	100	5	85
(CBF);(WD40)	1	25	25	28	28	40	213	100	4	89
(UTP15_C);(WD40)	1	23	23	30	30	27	190	48	4	77
(Fibrillarin);(U3_snoRNA_assoc)	1	22	22	22	22	17	176	100	5	100
(Utp12);(UTP15_C)	1	30	30	30	30	27	1429	100	3	100
(Utp12);(UTP15_C)	2	30	30	30	30	17	348	100	3	100
(LAMTOR5);(Robl_LC7)	1	20	20	20	20	80	959	80	60	100
(ATP-synt_J);(Fun_ATP-synt_8)	1	38	38	38	38	40	297	100	0	100
(ATP-synt_A);(Mt_ATP-synt_D)	1	63	63	63	63	21	308	100	10	100
(ATP-synt_A);(ATP-synt_J)	1	22	22	38	38	85	302	100	0	58
(IRK);(MTABC_N)	1	32	32	32	32	6	1071	100	0	100
(NusA_N);(RNA_pol_A_CTD)	1	23	23	23	23	87	412	100	26	100
(Asparaginase);(Asparaginase_C)	1	45	122	45	122	11	736	98	100	100
(Asparaginase);(Asparaginase_C)	2	45	122	45	122	11	667	100	100	100
(Asparaginase);(Asparaginase_C)	3	26	92	45	122	31	170	90	93	58
(AAA);(AAA_lid_3)	1	247	276	251	280	8	149	100	41	98
(AAA);(AAA_lid_3)	2	21	21	251	280	25	152	100	0	8
(AAA);(AAA_lid_9)	1	61	62	71	72	30	310	92	23	86
(AAA);(AAA_lid_9)	2	55	56	71	72	30	143	100	41	77
(ATP-synt_ab);(T3SS_ATPase_C)	1	190	229	262	339	7	243	94	53	73
(ATP-synt_ab);(T3SS_ATPase_C)	2	104	166	262	339	8	872	99	56	40
(TetR_C_24);(TetR_N)	1	39	44	39	44	5	505	100	95	100
(A2M);(A2M_BRD)	1	80	90	80	91	8	2041	98	86	100
(A2M_recep);(TED_complement)	1	24	28	38	43	17	875	100	82	63
(MG1);(TED_complement)	1	30	32	47	50	17	358	78	75	64
(ATP-synt_ab_C);(T3SS_ATPase_C)	1	139	171	193	225	36	216	96	60	72
(ATP-synt_ab_C);(T3SS_ATPase_C)	2	37	39	193	225	36	183	97	41	19
(IRK);(IRK_C)	1	55	85	55	87	5	599	100	49	100
(IRK);(IRK_C)	2	40	48	55	87	20	320	98	21	73
(MitMem_reg);(Rpn9_C)	1	33	33	37	37	33	1053	100	36	89
(MitMem_reg);(RPN6_C_helix)	1	58	58	76	76	12	411	100	10	76
(MitMem_reg);(RPN6_C_helix)	2	44	44	76	76	46	498	100	23	58
(GP120);(V-set_2)	1	41	51	88	113	9	926	100	43	47
(ATP-synt);(T3SS_ATPase_C)	1	149	179	192	222	18	345	100	57	78
(ATP-synt);(T3SS_ATPase_C)	2	119	140	192	222	18	188	100	66	62
(AAA_lid_3);(CDC48_N)	1	24	27	60	68	21	159	100	48	40
(AAA_lid_3);(CDC48_2)	1	34	36	38	46	29	317	100	42	89
(ETC_C1_NDUFA4);(NDUFV3)	1	53	53	81	81	51	178	100	11	65
(Molybdopterin);(NDUFV3)	1	34	34	41	41	71	141	100	6	83
(Peptidase_M1);(Peptidase_M1_N)	1	53	257	57	264	10	1352	100	93	93
(DPPIV_rep);(Peptidase_S9)	1	22	121	23	124	27	523	100	100	96
(AAA_2);(AAA_lid_9)	1	49	50	58	59	30	222	100	42	84
(SDH_C);(Shikimate_dh_N)	1	40	52	40	56	15	766	92	92	100
(SDH_C);(Shikimate_DH)	1	24	29	28	37	12	178	90	90	86
(AAA_lid_3);(Vps4_C)	1	58	64	63	69	10	1222	100	25	92
(I-EGF_1);(PSI_integrin)	1	26	68	27	71	33	310	100	63	96
(MG2);(TED_complement)	1	27	31	48	55	5	554	94	71	56
(A2M);(MG2)	1	80	89	80	91	8	641	98	85	100
(A2M);(MG3)	1	63	69	74	83	23	424	97	87	85
(A2M_BRD);(MG2)	1	65	73	66	74	8	434	100	86	98
(MG1);(MG2)	1	45	51	60	66	15	202	100	92	75
(MG2);(MG3)	1	61	67	65	73	20	298	100	87	94
(A2M_BRD);(MG4)	1	58	64	66	74	22	415	100	86	88
(A2M_BRD);(MG1)	1	60	66	62	68	6	644	100	86	97
(MG3);(MG4)	1	56	62	63	69	22	199	100	87	89
(A2M_recep);(MG3)	1	37	42	56	63	30	419	95	88	66
(A2M_BRD);(MG3)	1	40	43	42	46	24	253	100	88	95
(AAA_16);(AAA_lid_10)	1	21	21	22	22	18	306	48	5	95
(ATP-synt_D);(T3SS_ATPase_C)	1	42	47	45	52	11	255	100	26	93
(ATP-synt_D);(T3SS_ATPase_C)	2	30	30	45	52	27	174	100	20	67
(Tfb2_C);(Tfb5)	1	43	46	43	46	26	964	98	37	100
(MCM);(MCM_lid)	1	45	45	45	45	25	1644	100	40	100
(MCM);(MCM_lid)	2	44	44	45	45	24	698	95	34	98
(MitMem_reg);(RPN5_C)	1	75	75	76	76	40	882	89	19	99
(AAA_6);(AAA_lid_11)	1	21	23	21	24	20	651	91	48	100
(AAA_7);(Dynein_AAA_lid)	1	20	22	20	23	2	1094	86	41	100
(GTP_EFTU);(RL10P_insert)	1	26	26	29	29	17	456	100	4	90
(MRPL52);(Ribosomal_L20)	1	58	63	59	64	19	252	100	14	98
(MRPL52);(Ribosomal_L21p)	1	60	65	60	65	22	630	100	14	100
(MRP-63);(MRPL52)	1	58	63	59	64	69	383	100	14	98
(MRPL52);(Ribosomal_L30)	1	59	64	60	65	18	398	100	14	98
(AAA_lid_3);(RPN7)	1	21	21	64	64	39	153	67	14	33
(APG6_N);(Rpn3_C)	1	28	28	40	40	2	277	100	11	70
(JAB);(RPN5_C)	1	61	61	72	72	40	182	92	20	85
(Proteasome);(RPN6_N)	1	29	29	42	42	24	269	100	17	69
(AAA_lid_3);(Proteasome)	1	63	63	71	71	19	221	94	21	89
(AAA_lid_3);(Proteasome)	2	37	37	71	71	61	252	100	11	52
(APG6_N);(Prot_ATP_ID_OB)	1	44	44	53	53	2	391	95	18	83
(APG6_N);(HEAT_2)	1	32	32	46	46	1	286	100	9	70
(APG6_N);(RPN1_RPN2_N)	1	38	38	46	46	1	446	100	11	83
(DASH_Hsk3);(Prot_ATP_ID_OB)	1	26	26	26	26	2	443	96	27	100
(Lactonase);(WD40)	1	20	20	22	22	5	1335	95	50	91
(Cas9_PI);(RuvC_III)	1	33	73	33	74	56	611	100	67	100
(HNH_4);(RuvC_III)	1	37	76	40	84	15	396	100	75	92
(Nrap_D4);(RRM_Rrp7)	1	27	27	30	30	18	563	100	0	90
(Nrap_D6);(RRM_Rrp7)	1	30	30	31	31	18	1538	100	0	97
(Csm4_C);(RAMPs)	1	21	21	32	37	80	229	100	5	66
(Csm1_B);(HD)	1	24	28	24	30	66	136	100	32	100
(MRPL52);(PBP)	1	22	22	31	31	63	246	100	14	71
(ORC_WH_C);(ORC2)	1	29	29	29	29	15	1480	86	7	100
(ORC_WH_C);(ORC5_C)	1	25	25	27	27	15	292	24	4	93
(fn3);(Insulin_TMD)	1	22	22	22	22	31	540	100	23	100
(eIF3m_C_helix);(MitMem_reg)	1	42	42	42	42	3	977	95	7	100
(GCP_C_terminal);(Tubulin)	1	25	25	25	25	16	387	100	4	100
(GCP_C_terminal);(Tubulin_C)	1	25	25	25	25	16	924	100	4	100
(GCP_C_terminal);(Tubulin_C)	2	20	20	25	25	78	259	100	0	80
(TFA2_Winged_2);(TFIIE_alpha)	1	37	41	39	43	19	446	100	29	95
(CHCH);(NADHdh_A3)	1	48	48	54	54	16	373	100	12	89
(KH_8);(Ribosomal_S3Ae)	1	39	39	52	52	17	230	100	15	75
(KH_8);(Ribosomal_S11)	1	56	56	63	63	17	362	100	11	89
(ABC_membrane);(MTABC_N)	1	31	31	44	44	6	392	100	0	70
(TFIID-31kDa);(WD40)	1	26	26	27	27	31	463	100	15	96
(TFIID-31kDa);(WD40)	2	25	25	27	27	31	528	100	12	93
(CHCH);(NDUF_B5)	1	45	45	47	47	43	206	100	11	96
(Csm1_B);(Csm4_C)	1	21	26	32	37	19	124	100	27	66
(Csm2_III-A);(RAMPs)	1	26	26	26	26	15	356	100	4	100
(Fer4_21);(PsaA_PsaB)	1	34	40	34	40	72	271	100	20	100
(Fer4_21);(PsaD)	1	34	40	34	40	52	1155	100	20	100
(Fer4_21);(PSI_PsaE)	1	34	40	34	40	53	486	100	18	100
(Fer2_4);(Molybdop_Fe4S4)	1	21	21	25	25	62	113	100	14	84
(CDC50);(PhoLip_ATPase_C)	1	43	47	43	47	21	2183	100	19	100
(NmrA);(Oxidored_q6)	1	41	41	44	44	71	282	100	12	93
(ATP-synt_C);(ATP-synt_S1)	1	36	36	36	36	22	329	100	0	100
(ATP-synt_S1);(vATP-synt_AC39)	1	36	36	36	36	24	276	100	0	100
(FBPase);(FBPase_C)	1	28	139	28	149	20	1365	97	97	100
(FBPase);(FBPase_C)	2	27	132	28	149	20	214	89	97	96
(Gag_p24);(Gag_p24_C)	1	30	82	118	193	1	413	99	85	25
(Gag_p24);(Gag_p24_C)	2	29	42	118	193	2	275	100	67	25
(Gag_p24);(Gag_p24_C)	3	24	78	118	193	1	392	100	79	20
(EFG_C);(EFG_III)	1	26	47	31	52	15	241	100	98	84
(EFG_III);(GTP_EFTU)	1	21	37	28	49	13	233	100	86	75
(EphA2_TM);(PK_Tyr_Ser-Thr)	1	28	118	28	122	14	508	100	100	100
(Helicase_C);(SNF2-rel_dom)	1	42	44	42	44	3	985	91	57	100
(CoV_NSP7);(CoV_NSP8)	1	41	45	50	54	39	1330	100	29	82
(bCoV_S1_RBD);(Peptidase_M2)	1	179	196	179	199	46	868	71	17	100
(bCoV_S1_RBD);(V-set)	1	76	102	625	668	41	341	74	20	12
(bCoV_S1_RBD);(V-set)	2	73	99	625	668	65	713	73	21	12
(bCoV_S1_RBD);(V-set)	3	58	58	625	668	20	202	62	12	9
(bCoV_S1_RBD);(V-set)	4	40	40	625	668	88	443	45	10	6
(bCoV_S1_RBD);(C1-set)	1	72	104	162	198	67	562	1	2	44
(bCoV_S1_N);(bCoV_S1_RBD)	1	1034	1075	1097	1138	4	299	63	19	94
(bCoV_S1_N);(bCoV_S1_RBD)	2	542	542	1097	1138	17	312	60	8	49
(bCoV_S1_N);(bCoV_S1_RBD)	3	389	389	1097	1138	65	202	66	7	35
(bCoV_S1_N);(bCoV_S1_RBD)	4	32	32	1097	1138	53	588	91	3	3
(bCoV_S1_N);(bCoV_S1_RBD)	5	21	21	1097	1138	20	557	81	5	2
(HD);(HD_assoc_2)	1	20	63	20	63	8	2098	100	100	100
(PAP_assoc);(TUTase)	1	24	59	24	59	3	1477	98	98	100
(EFG_III);(Ribosom_S12_S23)	1	74	79	80	88	13	260	100	4	92
(Ribosomal_L15e);(RNase_P_pop3)	1	41	41	41	41	82	514	100	2	100
(Ribosomal_L23eN);(RNase_P_pop3)	1	41	41	41	41	49	139	95	2	100
(bCoV_S1_N);(CoV_S2)	1	671	671	698	698	19	173	62	8	96
(bCoV_S1_RBD);(CoV_S2)	1	583	583	593	593	14	284	62	8	98
(bCoV_S1_RBD);(CoV_S2)	2	137	137	593	593	14	121	55	4	23
(CoV_S1_C);(CoV_S2)	1	710	710	713	713	12	461	63	7	100
(bCoV_S1_N);(CoV_S1_C)	1	733	733	755	756	12	502	62	7	97
(bCoV_S1_N);(CoV_S1_C)	2	698	699	755	756	12	725	62	8	92
(bCoV_S1_RBD);(CoV_S1_C)	1	566	566	607	608	12	228	61	8	93
(Prot_ATP_ID_OB);(ZapB)	1	28	28	35	35	2	449	75	29	80
(bCoV_S1_N);(V-set)	1	27	27	167	169	21	554	81	15	16
(G-gamma);(ZapB)	1	118	118	120	120	7	757	72	2	98
(V-set);(ZapB)	1	20	20	49	49	8	141	100	0	41
(ABC_tran);(ABC2_membrane_7)	1	24	24	24	24	86	1093	92	21	100
(RNA_pol_Rpb2_2);(RPC5)	1	30	30	30	30	20	731	100	50	100
(RNA_POL_M_15KD);(RPC5)	1	30	30	30	30	20	529	100	50	100
(RNA_pol_Rpc4);(RPC5)	1	30	30	30	30	20	2578	100	50	100
(DNAPKcs_CC5);(FAT)	1	31	31	37	37	11	253	100	45	84
(DNAPKcs_CC5);(PI3_PI4_kinase)	1	34	34	37	37	11	386	100	47	92
(DNAPKcs_CC5);(NUC194)	1	29	29	29	29	71	761	100	52	100
(CPSF_A);(SF3a60_Prp9_C)	1	20	20	20	20	24	441	80	5	100
(Histone);(SNF2-rel_dom)	1	23	23	30	30	39	183	83	9	77
(DUF3912);(RNA_pol_Rpb1_2)	1	25	25	25	25	38	169	100	16	100
(DUF3912);(RNA_pol_Rpb2_6)	1	25	25	25	25	38	357	100	16	100
(DUF3912);(RNA_pol_A_bac)	1	25	25	25	25	38	328	100	16	100
(MMR_HSR1);(Sas10)	1	28	28	30	30	50	356	100	4	93
(CoV_NSP8);(RdRP_1)	1	43	43	44	44	62	398	100	16	98