Protein Common Interface Database

Clusters with M>=10,SeqId<90 and pair Pfam Architecture

Pfam Architecture	Cluster#	#CFs/Cluster	#Entries/Cluster	#CFs/Group	#Entries/Group	Minimum Seq Identity	Surface Area	In PDBBA(%)	In PISABA(%)	CFs Cluster/Group(%)
(2Fe-2S_thioredx);(Complex1_51K)_(SLBB)_(NADH_4Fe-4S)	1	10	12	10	12	34	2339	83	83	100
(Complex1_49kDa);(Oxidored_q6)	1	11	13	11	13	38	1197	77	77	100
(COX1);(COX2_TM)_(COX2)	1	13	51	13	52	33	3541	92	86	100
(COX1);(COX3)	1	11	41	11	42	19	2514	90	85	100
(Cytochrom_C1);(Cytochrome_B)_(Cytochrom_B_C)	1	20	59	22	62	10	1596	93	92	91
(Cytochrom_C1);(UCR_14kD)	1	15	49	18	53	36	401	98	96	83
(Cytochrom_C1);(UCR_hinge)	1	19	53	19	54	30	1066	91	89	100
(Cytochrom_C1);(UCR_TM)_(Rieske)	1	10	33	14	49	51	783	100	97	71
(Cytochrom_C1);(UCR_UQCRX_QCR9)	1	16	50	19	54	32	840	96	94	84
(Cytochrom_C1);(UcrQ)	1	19	54	19	54	21	723	91	87	100
(Cytochrome_B)_(Cytochrom_B_C);(Peptidase_M16)_(Peptidase_M1 6_C)	1	13	47	18	53	26	406	100	98	72
(Cytochrome_B)_(Cytochrom_B_C);(UCR_14kD)	1	19	54	19	54	36	1198	91	87	100
(Ribosomal_L7Ae);(Ribosomal_S13_N)_(Ribosomal_S15)	1	29	29	35	35	10	369	0	0	83
(Cytochrome_B)_(Cytochrom_B_C);(UCR_TM)_(Rieske)	1	10	33	14	49	51	505	100	97	71
(Cytochrome_B)_(Cytochrom_B_C);(UcrQ)	1	18	52	18	53	21	974	90	88	100
(Ribosomal_S11);(Ribosomal_S28e)	1	21	21	36	36	46	295	24	5	58
(Peptidase_M16)_(Peptidase_M16_C);(UCR_14kD)	1	11	32	18	53	10	397	84	94	61
(Peptidase_M16)_(Peptidase_M16_C);(UCR_TM)_(Rieske)	1	11	28	14	49	71	920	89	86	79
(Peptidase_M16)_(Peptidase_M16_C);(UcrQ)	1	19	54	19	54	21	816	91	87	100
(UCR_14kD);(UcrQ)	1	15	49	18	53	21	468	98	96	83
(UCR_TM)_(Rieske);(UCR_UQCRX_QCR9)	1	13	36	14	49	32	645	92	89	93
(Ribosomal_S11);(Ribosomal_S3Ae)	1	73	87	83	97	10	870	26	6	88
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S17_N)_(Ribosom al_S17)	1	17	17	18	18	35	264	35	6	94
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S7e)	1	22	22	27	27	34	232	32	14	81
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S8)	1	30	32	31	33	10	211	12	9	97
(Ribosomal_S17_N)_(Ribosomal_S17);(Ribosomal_S8e)	1	74	88	82	96	10	733	20	6	90
(Ribosomal_S24e);(Ribosomal_S4)_(S4)	1	42	56	43	57	10	232	14	4	98
(Ribosomal_S28e);(Ribosomal_S7)	1	83	97	85	99	10	1145	24	4	98
(Ribosomal_S7e);(Ribosomal_S8)	1	81	95	81	95	10	469	23	5	100
(C1-set);(MHC_I)_(C1-set)	1	109	161	115	203	13	1245	100	98	95
(TBP)_(TBP);(TFIIA)	1	15	16	15	16	36	667	100	25	100
(TFIIA);(TFIIA_gamma_N)_(TFIIA_gamma_C)	1	15	16	15	16	34	2109	100	31	100
(Mago_nashi);(RRM_1)	1	10	10	10	10	68	1277	100	100	100
(C1-set);(MHC_I)_(C1-set)	2	10	12	115	203	66	274	0	0	9
(Ig_3)_(C1-set);(V-set)_(C1-set)	1	21	27	21	27	19	1682	100	85	100
(Flavi_glycoprot)_(Flavi_glycop_C);(Flavi_M)	1	16	16	17	17	33	723	94	0	94
(Flu_PA);(Flu_PB1)	1	12	13	12	13	10	7495	100	85	100
(FXa_inhibition);(Trypsin)	1	17	121	17	145	35	887	95	100	100
(G-gamma);(Myc-LZ)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	18	34	18	36	10	2253	100	97	100
(GP120);(V-set)_(C1-set)	1	33	59	109	163	10	925	98	61	30
(GP120);(V-set)_(C1-set)	2	19	34	109	163	35	263	100	71	17
(GP120);(V-set)_(C1-set)	3	10	24	109	163	58	243	0	4	9
(GP120);(V-set)_(C1-set)	4	10	13	109	163	56	300	100	15	9
(GP120);(GP41)	1	16	21	16	21	71	2559	95	43	100
(GP120);(ig)_(C2-set)_(CD4-extracel)	1	14	26	14	26	23	1040	100	62	100
(Actin);(Gelsolin)	1	11	29	11	29	10	1216	100	100	100
(GTP_EFTU)_(GTP_EFTU_D2)_(EFG_II)_(EFG_IV)_(EFG_C);(Ribosom_ S12_S23)	1	18	18	22	24	10	352	50	0	82
(V-set)_(C1-set);(V-set)_(C1-set)_(C1-set)_(C1-set)	1	11	11	13	13	16	1659	100	82	85
(Plug_translocon)_(SecY);(SecE)	1	15	17	17	19	21	1594	82	65	88
(Hormone_recep);(SRC-1)	1	10	17	51	219	25	677	100	100	20
(Ran_BP1);(Ras)	1	14	38	14	38	22	2110	100	97	100
(Ribosomal_L13);(Ribosomal_L3)	1	76	90	94	167	10	409	20	7	81
(Ribosomal_L13);(Ribosomal_L3)	2	10	68	94	167	16	249	100	3	11
(Ribosomal_L14);(Ribosomal_L3)	1	95	167	102	175	10	411	54	7	93
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L29)	1	82	96	85	99	10	756	25	10	96
(Synaptobrevin);(Syntaxin)_(SNARE)	1	18	22	18	23	10	1392	100	68	100
(Phenol_Hydrox);(Phenol_Hydrox)_(YHS)	1	13	68	13	71	10	4673	100	100	100
(Pico_P1A);(Rhv)	1	38	122	41	126	32	1016	100	42	93
(Pico_P1A);(Rhv)	2	30	114	41	126	10	814	100	38	73
(Pico_P1A);(Rhv)	3	29	100	41	126	36	533	100	37	71
(KOW)_(Ribosomal_L14e);(Ribosomal_L13)	1	51	65	79	93	10	774	14	2	65
(KOW)_(Ribosomal_L14e);(Ribosomal_L18A)	1	60	74	77	91	23	957	24	9	78
(KOW)_(Ribosomal_L14e);(Ribosomal_L18A)	2	15	15	77	91	10	989	0	0	19
(KOW)_(Ribosomal_L14e);(Ribosomal_L6)_(Ribosomal_L6)	1	48	62	63	77	10	482	16	10	76
(KOW)_(Ribosomal_L14e);(Ribosomal_L6)_(Ribosomal_L6)	2	13	13	63	77	10	237	23	8	21
(Ribosomal_L13);(Ribosomal_L18A)	1	53	67	75	89	35	682	13	1	71
(Ribosomal_L13);(Ribosomal_L18A)	2	22	22	75	89	15	668	36	23	29
(Ribosomal_L13);(Ribosomal_L35Ae)	1	46	48	65	79	10	239	17	2	71
(Ribosomal_L13);(Ribosomal_L35Ae)	2	19	19	65	79	37	243	32	21	29
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2 _3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	22	54	22	54	80	1931	100	83	100
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(RNA _pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2 _3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	2	20	51	22	54	80	256	100	88	91
(Ribosomal_L14);(Ribosomal_L24e)	1	94	166	99	173	10	514	54	7	95
(Ribosomal_L15e);(Ribosomal_L29)	1	78	92	78	92	20	356	21	8	100
(Ribosomal_L15e);(Ribosomal_L7Ae)	1	90	162	90	163	10	908	54	5	100
(Ribosomal_L18);(Ribosomal_L27A)	1	80	94	83	97	10	894	23	7	96
(Ribosomal_L18A);(Ribosomal_L21e)	1	74	88	77	91	10	905	20	8	96
(Ribosomal_L18A);(Ribosomal_L6)_(Ribosomal_L6)	1	73	87	76	90	10	302	18	8	96
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_L37ae)	1	91	163	93	166	10	1209	55	5	98
(Ribosomal_L2)_(Ribosomal_L2_C);(Ribosomal_L7Ae)	1	68	82	76	90	10	297	23	9	89
(Ribosomal_L21e);(Ribosomal_L5e)_(Ribosomal_L18_c)	1	79	93	85	99	10	850	22	8	93
(Me-amine-dh_H);(Me-amine-dh_L)	1	14	69	14	69	12	1511	99	94	100
(Me-amine-dh_H);(Me-amine-dh_L)	2	14	69	14	69	12	1142	94	96	100
(MCM_N)_(MCM_OB)_(MCM);(MCM2_N)_(MCM_N)_(MCM_OB)_(MCM)	1	10	10	10	10	18	2592	100	40	100
(Ribosomal_L24e);(Ribosomal_L3)	1	81	95	86	100	10	589	21	9	94
(Ribosomal_L29);(Ribosomal_L37e)	1	17	17	17	17	45	205	18	0	100
(Ribosomal_L34e);(Ribosomal_L7Ae)	1	76	90	82	96	10	263	20	8	93
(Ribosomal_L37e);(Ribosomal_L39)	1	66	80	69	83	39	230	20	9	96
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_L5e)_(Ribosomal_L 18_c)	1	74	88	80	94	10	244	19	8	92
(Cyclin_N)_(Cyclin_C);(Pkinase)	1	23	102	24	139	10	1578	98	97	96
(NiFeSe_Hases);(Oxidored_q6)_(NiFe_hyd_SSU_C)	1	21	55	22	75	27	3609	98	98	95
(Bclx_interact);(BH4)_(Bcl-2)	1	11	13	11	13	10	996	100	100	100
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S10)	1	173	373	264	504	10	406	99	18	66
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S10)	2	80	94	264	504	10	474	21	4	30
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S14)	1	177	383	262	502	10	863	99	20	68
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S14)	2	80	94	262	502	10	411	21	4	31
(Ribosom_S12_S23);(Ribosomal_S17)	1	151	334	166	390	10	220	99	25	91
(Ribosomal_S10);(Ribosomal_S14)	1	181	382	273	513	10	800	99	22	66
(Ribosomal_S10);(Ribosomal_S14)	2	89	103	273	513	10	756	22	5	33
(Ribosomal_S10);(Ribosomal_S9)	1	16	16	34	41	17	288	81	0	47
(Ribosomal_S11);(Ribosomal_S18)	1	82	255	108	312	41	313	100	9	76
(Ribosomal_S11);(Ribosomal_S7)	1	141	310	168	382	10	243	98	22	84
(Ribosomal_S13);(Ribosomal_S19)	1	258	477	270	510	10	433	84	11	96
(Ribosomal_S14);(Ribosomal_S19)	1	88	115	106	134	10	296	98	20	83
(OTU);(ubiquitin)	1	12	14	12	14	10	1021	100	93	100
(Cytochrom_B559);(Cytochrom_B559)_(Cytochrom_B559a)	1	16	36	16	38	16	761	100	67	100
(Cytochrom_B559);(Photo_RC)	1	16	35	16	38	10	466	100	74	100
(Cytochrom_B559);(PsbJ)	1	14	34	14	36	10	373	100	50	100
(Cytochrom_B559)_(Cytochrom_B559a);(Photo_RC)	1	15	34	16	38	31	1328	100	71	94
(Cytochrom_B559)_(Cytochrom_B559a);(Photo_RC)	2	15	35	16	38	10	311	100	71	94
(Cytochrom_B559)_(Cytochrom_B559a);(PsbJ)	1	14	34	14	36	10	390	100	50	100
(MSP);(Photo_RC)	1	15	34	15	37	31	680	100	53	100
(MSP);(Photo_RC)	2	14	33	15	37	10	709	100	48	93
(MSP);(PSII)	1	15	34	15	37	43	767	100	50	100
(MSP);(PSII)	2	15	33	15	37	43	1297	100	55	100
(MSP);(PSII)	3	13	26	15	37	10	393	65	8	87
(Photo_RC);(PsbH)	1	15	34	15	37	31	271	100	68	100
(Photo_RC);(PsbI)	1	15	35	15	37	10	863	100	49	100
(Photo_RC);(PsbL)	1	15	35	15	37	10	253	100	57	100
(Photo_RC);(PsbL)	2	13	26	15	37	10	396	100	50	87
(Photo_RC);(PsbT)	1	15	35	15	37	48	517	100	60	100
(Photo_RC);(PsbT)	2	11	23	15	37	48	208	100	52	73
(Photo_RC);(PsbX)	1	14	32	14	36	31	589	100	62	100
(Photo_RC);(PSII)	1	16	36	16	38	17	798	100	81	100
(Photo_RC);(PSII)	2	16	35	16	38	31	2744	100	77	100
(Photo_RC);(PSII)	3	15	33	16	38	79	3177	100	70	94
(PsbH);(PsbX)	1	14	32	14	36	31	296	100	53	100
(PsbH);(PSII)	1	15	35	15	37	61	1891	100	71	100
(PsbI);(PSII)	1	15	33	15	37	67	451	100	52	100
(PsbK);(PSII)	1	15	33	15	37	14	819	100	67	100
(PsbK);(Ycf9)	1	15	35	15	37	12	273	100	51	100
(PsbL);(PsbM)	1	14	34	14	36	10	804	100	74	100
(PsbL);(PsbT)	1	14	34	14	36	10	603	100	74	100
(PsbL);(PSII)	1	15	35	15	37	10	600	100	60	100
(PSII);(Ycf9)	1	15	32	15	37	10	437	100	50	100
(Ribosomal_S18);(Ribosomal_S6)	1	180	378	191	417	10	933	99	13	94
(Ribosomal_S2);(Ribosomal_S8)	1	72	242	77	274	82	258	100	8	94
(Ribosomal_S4)_(S4);(Ribosomal_S5)_(Ribosomal_S5_C)	1	140	340	220	460	10	320	99	23	64
(Ribosomal_S4)_(S4);(Ribosomal_S5)_(Ribosomal_S5_C)	2	47	61	220	460	10	370	18	5	21
(Ribosomal_S5)_(Ribosomal_S5_C);(Ribosomal_S8)	1	168	368	275	515	10	569	95	20	61
(Ribosomal_S5)_(Ribosomal_S5_C);(Ribosomal_S8)	2	70	84	275	515	10	543	26	7	25
(Ribosomal_S5)_(Ribosomal_S5_C);(Ribosomal_S8)	3	20	20	275	515	10	542	95	0	7
(Ribosomal_S7);(Ribosomal_S9)	1	211	393	244	460	10	447	81	14	86
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb6)	1	45	74	48	77	12	1564	100	92	94
(MHC_I)_(C1-set);(V-set)_(DUF1968)	1	13	42	16	55	22	593	88	38	81
(V-set)_(C1-set);(V-set)_(DUF1968)	1	157	261	163	279	10	2041	99	91	96
(Ras);(RhoGEF)_(PH)	1	13	15	14	16	10	1508	100	100	93
(C1-set);(MHC_I_3)_(C1-set)	1	15	62	15	67	28	1296	100	94	100
(Rieske)_(Ring_hydroxyl_A);(Ring_hydroxyl_B)	1	13	52	13	52	20	1776	100	96	100
(Rieske)_(Ring_hydroxyl_A);(Ring_hydroxyl_B)	2	10	24	13	52	29	316	100	100	77
(RVT_1)_(RVT_thumb)_(RVT_connect);(RVT_1)_(RVT_thumb)_(RVT_c onnect)_(RNase_H)	1	17	127	18	146	60	2603	100	99	94
(Cullin)_(Cullin_Nedd8);(zf-rbx1)	1	12	12	12	12	10	2009	100	100	100
(MHC_II_beta)_(C1-set);(V-set)_(C1-set)	1	15	23	26	35	52	302	91	35	58
(MHC_II_beta)_(C1-set);(V-set)_(DUF1968)	1	28	32	31	41	20	354	97	25	90
(Ribosomal_L16);(Ribosomal_L21e)	1	34	47	39	53	10	214	13	11	87
(Ribosomal_L16);(Ribosomal_L5e)_(Ribosomal_L18_c)	1	42	56	63	77	50	257	12	7	67
(Ribosomal_L6)_(Ribosomal_L6);(ubiquitin)_(Ribosomal_L40e)	1	39	39	47	47	38	634	38	18	83
(Photo_RC);(PRCH)_(PRC)	1	14	126	14	131	38	1616	100	97	100
(Photo_RC);(PRCH)_(PRC)	2	14	126	14	131	38	2676	100	98	100
(Cytochrom_C550);(Photo_RC)	1	15	35	15	37	54	564	100	80	100
(Cytochrom_C550);(PsbU)	1	14	34	14	36	35	635	100	62	100
(Cytochrom_C550);(PSII)	1	16	34	16	38	54	903	100	76	100
(MSP);(PsbU)	1	14	33	14	36	35	518	100	52	100
(PsbK);(PSII_Ycf12)	1	12	30	12	34	10	485	100	57	100
(PsbU);(PSII)	1	14	34	14	36	35	447	100	62	100
(PsbU);(PSII)	2	14	32	14	36	35	437	100	56	100
(MHC_II_alpha)_(C1-set);(MHC_II_beta)_(C1-set)	1	107	138	110	145	10	2639	100	97	97
(MHC_II_alpha)_(C1-set);(MHC_II_beta)_(C1-set)	2	19	21	110	145	21	380	14	14	17
(MHC_II_alpha)_(C1-set);(MHC_II_beta)_(C1-set)	3	10	11	110	145	23	325	0	0	9
(PSII_Ycf12);(Ycf9)	1	12	30	12	34	10	395	100	53	100
(MHC_II_alpha)_(C1-set);(V-set)_(C1-set)	1	23	31	31	41	10	343	94	26	74
(Ribosomal_L16);(Ribosomal_L25p)_(Ribosomal_TL5_C)	1	60	154	67	188	10	1137	100	12	90
(Ribosomal_L31);(Ribosomal_S13)	1	42	119	73	172	40	429	100	12	58
(Ribosomal_L31);(Ribosomal_S13)	2	14	14	73	172	16	330	100	57	19
(Ribosomal_L31);(Ribosomal_S19)	1	45	103	73	161	10	449	100	22	62
(C1-set);(MHC_I)_(C2-set_2)	1	16	22	16	22	39	1301	100	100	100
(DKCLD)_(TruB_N)_(TruB_C_2)_(PUA);(Nop10p)	1	10	10	10	10	27	1331	100	100	100
(KOW)_(Ribosomal_L27e);(Ribosomal_L34e)	1	78	92	80	94	10	665	21	8	98
(KOW)_(Ribosomal_L27e);(Ribosomal_L7Ae)	1	77	91	79	93	10	512	20	8	97
(KOW)_(Ribosomal_L27e);(Ribosomal_L7Ae)	2	70	84	79	93	10	282	20	8	89
(Ribosomal_L15e);(Ribosomal_L36e)	1	77	91	77	91	10	528	21	8	100
(Ribosomal_L18);(Ribosomal_L30_N)_(Ribosomal_L30)	1	63	77	75	89	10	261	21	9	84
(Ribosomal_L18A);(Ribosomal_L30_N)_(Ribosomal_L30)	1	67	81	78	92	10	462	23	9	86
(Ribosomal_L21e);(Ribosomal_L30_N)_(Ribosomal_L30)	1	63	77	76	90	34	591	23	9	83
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L39)	1	68	82	73	87	10	224	23	10	93
(Ribosomal_L23eN)_(Ribosomal_L23);(Ribosomal_L7Ae)	1	71	85	71	85	10	373	20	7	100
(Ribosomal_L27A);(Ribosomal_L36e)	1	62	76	65	79	10	230	18	8	95
(Ribosomal_L36e);(Ribosomal_L7Ae)	1	67	81	75	89	10	307	23	9	89
(Ribosomal_L44);(Ribosomal_L5)_(Ribosomal_L5_C)	1	13	13	20	20	70	222	15	15	65
(KOW)_(Ribosomal_L14e);(Ribosomal_L6e)	1	41	55	41	55	38	493	18	11	100
(Ribosomal_L13e);(Ribosomal_L15e)	1	76	90	76	90	10	515	21	8	100
(Ribosomal_L13e);(Ribosomal_L18)	1	61	75	65	79	10	235	19	9	94
(Ribosomal_L13e);(Ribosomal_L27A)	1	79	93	79	93	10	1478	24	8	100
(Ribosomal_L13e);(Ribosomal_L29)	1	78	92	78	92	10	910	24	8	100
(Ribosomal_L13e);(Ribosomal_L36e)	1	75	89	75	89	10	649	20	8	100
(Ribosomal_L13e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	38	38	43	43	10	221	18	5	88
(Ribosomal_L15e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	74	88	76	90	10	269	22	8	97
(Ribosomal_L18);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	77	91	79	93	10	1116	22	8	97
(Ribosomal_L18A);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	37	51	41	55	46	235	22	14	90
(Ribosomal_L26)_(KOW)_(Ribosomal_L26);(Ribosomal_L4)_(Ribos_ L4_asso_C)	1	19	19	23	23	47	226	16	5	83
(Ribosomal_L30_N)_(Ribosomal_L30);(Ribosomal_L4)_(Ribos_L4_a sso_C)	1	63	77	74	88	10	1069	22	9	85
(Ribosomal_L30_N)_(Ribosomal_L30);(Ribosomal_L4)_(Ribos_L4_a sso_C)	2	11	11	74	88	52	891	9	0	15
(Ribosomal_L32e);(Ribosomal_L6e)	1	38	52	38	52	78	527	17	12	100
(Ribosomal_L35Ae);(Ribosomal_L6e)	1	41	55	41	55	40	868	18	11	100
(Ecotin);(Trypsin)	1	12	17	12	17	27	952	100	100	100
(Ecotin);(Trypsin)	2	10	15	12	17	27	512	93	100	83
(RNA_pol_I_A49);(RNA_polI_A34)	1	15	19	15	19	38	2125	100	95	100
(Ribosomal_L18);(Ribosomal_L28e)	1	36	36	36	36	10	232	22	3	100
(RNA_polI_A14);(SHS2_Rpb7-N)	1	14	18	14	18	84	1620	100	67	100
(DUF5089);(Syntaxin)_(SNARE)	1	11	12	11	12	10	1466	100	100	100
(C1-set);(MHC_I)_(Ig_3)	1	256	503	257	507	22	1283	99	94	100
(C1-set);(MHC_I)_(Ig_3)	2	30	81	257	507	83	258	0	0	12
(C1-set);(MHC_I)_(Ig_3)	3	20	62	257	507	19	261	0	2	8
(C1-set);(MHC_I)_(Ig_3)	4	20	36	257	507	74	333	3	0	8
(C1-set);(MHC_I)_(Ig_3)	5	20	36	257	507	74	344	3	11	8
(C1-set);(MHC_I)_(Ig_3)	6	20	28	257	507	41	267	0	11	8
(C1-set);(MHC_I)_(Ig_3)	7	16	65	257	507	84	214	2	0	6
(C1-set);(MHC_I)_(Ig_3)	9	11	36	257	507	84	510	0	6	4
(C1-set);(MHC_I)_(Ig_3)	10	11	37	257	507	69	224	0	0	4
(C1-set);(MHC_I)_(Ig_3)	11	10	15	257	507	86	335	0	0	4
(Fib_alpha);(Fib_alpha)_(Fibrinogen_C)	1	14	32	14	32	31	1737	100	88	100
(Fib_alpha);(Fib_alpha)_(Fibrinogen_C)	2	12	27	14	32	31	853	100	96	86
(MHC_I)_(Ig_3);(V-set)_(DUF1968)	1	24	48	49	82	37	410	100	69	49
(KH_2)_(Ribosomal_S3_C);(Ribosomal_S17e)	1	76	90	76	90	10	493	20	4	100
(Ribosomal_L28e);(Ribosomal_L32e)	1	34	34	39	39	10	755	24	0	87
(Ribosomal_L28e);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	15	15	24	24	83	518	20	0	62
(Ribosomal_L32e);(Ribosomal_L6e_N)_(Ribosomal_L6e)	1	15	15	24	24	83	232	20	0	62
(KH_2)_(Ribosomal_S3_C);(S10_plectin)	1	75	89	75	89	10	890	20	4	100
(KH_2)_(Ribosomal_S3_C);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)_(WD40)	1	30	44	30	44	10	480	5	2	100
(Ribosom_S12_S23);(Ribosomal_S17_N)_(Ribosomal_S17)	1	85	99	85	99	10	464	21	7	100
(JAB)_(MitMem_reg);(TPR_19)_(PCI)	1	11	11	11	11	77	1471	100	73	100
(Ribosomal_L21e);(Ribosomal_L29e)	1	77	91	77	91	10	472	20	8	100
(PPR)_(DUF410)_(PCI);(RPN7)_(PCI)	1	11	11	11	11	84	1376	100	64	100
(Ribosom_S12_S23);(Ribosomal_S30)	1	67	81	68	82	10	474	23	6	99
(CSN8_PSD8_EIF3K);(TPR_19)_(PCI)_(Rpn3_C)	1	10	10	10	10	86	2061	100	80	100
(Ribosomal_L24e);(Ribosomal_S6e)	1	32	46	35	49	10	814	0	0	91
(Ribosomal_L40e);(Ribosomal_L6)_(Ribosomal_L6)	1	30	44	30	44	46	659	7	7	100
(Ribosomal_L7Ae);(Ribosomal_S27)	1	27	41	31	45	10	508	12	7	87
(Ribosomal_L7Ae);(S10_plectin)	1	16	16	20	20	31	288	19	0	80
(Ribosomal_S11);(Ribosomal_S26e)	1	71	85	79	93	10	1097	22	6	90
(Ribosomal_S13);(Ribosomal_S19e)	1	79	93	82	96	10	444	22	6	96
(Ribosomal_S13);(Ribosomal_S25)	1	70	84	75	89	10	470	20	5	93
(Ribosomal_S13_N)_(Ribosomal_S15);(Ribosomal_S27e)	1	84	98	86	100	10	716	23	5	98
(Ribosomal_S14);(S10_plectin)	1	74	88	76	90	10	289	20	5	97
(Ribosomal_S17e);(Ribosomal_S2)_(40S_SA_C)	1	67	81	74	88	10	997	16	5	91
(Fimbrial);(PapD_N)_(PapD_C)	1	12	14	12	14	10	1663	100	100	100
(Ribosomal_S17e);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)	1	32	46	32	46	10	541	4	2	100
(Ribosomal_S19e);(Ribosomal_S9)	1	45	45	51	51	10	291	22	11	88
(Ribosomal_S2)_(40S_SA_C);(Ribosomal_S21e)	1	74	88	74	88	10	1522	19	6	100
(Ribosomal_S2)_(40S_SA_C);(Ribosomal_S5)_(Ribosomal_S5_C)	1	75	89	75	89	10	543	19	6	100
(Ribosomal_S21e);(Ribosomal_S27e)	1	39	53	39	53	55	438	17	4	100
(Ribosomal_S21e);(Ribosomal_S5)_(Ribosomal_S5_C)	1	78	92	78	92	10	1322	21	5	100
(Ribosomal_S21e);(Ribosomal_S8)	1	67	81	68	82	10	282	20	5	99
(Ribosomal_S24e);(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_S4_ C)	1	76	90	83	97	10	540	22	6	92
(Ribosomal_S25);(Ribosomal_S7)	1	73	87	77	91	10	611	21	5	95
(MHC_I)_(Ig_3);(V-set)_(C1-set)	1	38	62	47	73	10	406	98	48	81
(Serpin);(Trypsin)	1	10	10	14	14	24	1122	100	100	71
(Ribosomal_S26e);(Ribosomal_S3Ae)	1	63	77	69	83	10	271	22	4	91
(Ribosomal_S27e);(Ribosomal_S7e)	1	31	31	33	33	31	350	26	6	94
(Ribosomal_S27e);(Ribosomal_S8)	1	82	96	82	96	10	487	23	5	100
(Ribosomal_S30);(Ribosomal_S4)_(S4)	1	44	58	44	58	10	503	14	3	100
(Ribosomal_S4)_(S4);(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_ S4_C)	1	39	53	39	53	10	385	9	4	100
(Ribosomal_S6e);(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_S4_C )	1	75	89	75	89	10	313	20	6	100
(Ribosomal_S9);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD 40)	1	33	47	37	51	44	311	6	2	89
(eIF-1a);(Ribosom_S12_S23)	1	13	13	22	22	20	462	100	23	59
(KH_2)_(Ribosomal_S3_C);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_( WD40)	1	33	33	37	37	10	486	36	9	89
(Ribosomal_L7Ae);(ubiquitin)_(Ribosomal_S27)	1	39	39	41	41	10	579	33	3	95
(Ribosomal_S17e);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	40	40	40	40	10	554	38	8	100
(Ribosomal_S24e);(S4)	1	10	10	11	11	10	224	70	20	91
(Ribosomal_S30);(S4)	1	22	22	22	22	10	485	45	14	100
(Ribosomal_S5)_(Ribosomal_S5_C);(S4)	1	35	35	40	40	10	372	23	9	88
(Ribosomal_S9);(WD40)_(WD40)_(WD40)_(WD40)_(WD40)_(WD40)	1	36	36	36	36	10	284	42	8	100
(RS4NT)_(S4)_(Ribosomal_S4e)_(KOW)_(40S_S4_C);(S4)	1	37	37	37	37	10	345	35	8	100
(Ribosom_S12_S23);(ubiquitin)_(Ribosomal_S30)	1	15	15	15	15	55	399	20	0	100
(S4);(ubiquitin)_(Ribosomal_S30)	1	15	15	15	15	55	524	20	0	100
(C1-set);(MHC_I_3)_(Ig_3)	1	22	32	22	32	23	1243	100	94	100
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L)_(RNA_pol_A_CTD);(zf- RanBP)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_Rpb1_4)_(R NA_pol_Rpb1_5)	1	11	24	14	43	74	1162	100	75	79
(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_ Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7); (zf-RanBP)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_Rpb1_4 )_(RNA_pol_Rpb1_5)	1	11	24	14	43	74	8592	100	88	79
(RNA_pol_Rpb6);(zf-RanBP)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_ (RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)	1	12	25	14	43	74	2315	100	88	86
(G-alpha);(RGS)	1	10	10	10	10	37	875	100	10	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5);(Sigma70_r1_1)_(Sigma70_r1_2)_(Sigm a70_ner)_(Sigma70_r2)_(Sigma70_r3)_(Sigma70_r4)	1	13	25	13	26	78	2778	100	84	100
(KH_2)_(Ribosomal_S3_C);(Stm1_N)_(HABP4_PAI-RBP1)	1	14	28	17	31	77	771	0	0	82
(Ribosomal_L5)_(Ribosomal_L5_C);(Stm1_N)_(HABP4_PAI-RBP1)	1	14	28	17	31	77	566	0	0	82
(Ribosomal_S13);(Stm1_N)_(HABP4_PAI-RBP1)	1	14	28	17	31	77	527	0	0	82
(Ribosomal_S19);(Stm1_N)_(HABP4_PAI-RBP1)	1	14	28	17	31	77	419	0	0	82
(Ribosomal_S5)_(Ribosomal_S5_C);(Stm1_N)_(HABP4_PAI-RBP1)	1	14	27	17	31	77	256	0	0	82
(Ribosomal_L28e);(Ribosomal_L4)_(Ribos_L4_asso_C)	1	32	32	37	37	10	934	22	0	86
(Ribosomal_L4)_(Ribos_L4_asso_C);(Ribosomal_L6e_N)_(Ribosoma l_L6e)	1	21	21	22	22	10	351	14	0	95
(RNA_pol_L)_(RNA_pol_A_bac)_(RNA_pol_L);(RNA_pol_Rpb1_1)_(RN A_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb 1_5)	1	11	17	11	17	84	897	100	100	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_( RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_R pb2_2)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_45)_(RNA_pol_Rpb2_6)_( RNA_pol_Rpb2_7)	1	11	29	11	29	78	7766	100	90	100
(Kazal_1);(Trypsin)	1	10	35	10	35	10	639	100	97	100
(Ribosomal_L13);(Ribosomal_L20)	1	172	299	186	334	10	520	99	18	92
(Ribosomal_L13);(Ribosomal_L20)	2	10	10	186	334	29	459	80	20	5
(Ribosomal_L14);(Ribosomal_L19)	1	179	307	194	342	10	801	99	16	92
(Ribosomal_L16);(Ribosomal_L27)	1	36	82	45	115	22	263	100	4	80
(Ribosomal_L17);(Ribosomal_L32p)	1	173	300	185	330	10	353	99	15	94
(Ribosomal_L19);(Ribosomal_L3)	1	175	302	193	341	10	716	98	17	91
(Ribosomal_L20);(Ribosomal_L21p)	1	186	317	191	340	10	967	99	15	97
(Ribosomal_L22);(Ribosomal_L32p)	1	183	314	189	338	10	464	98	17	97
(Ribosomal_L23);(Ribosomal_L29)	1	184	369	196	404	10	479	99	13	94
(Ribosomal_L27A);(Ribosomal_L35p)	1	170	292	189	337	10	780	98	15	90
(Ribosomal_L27A);(Ribosomal_L4)	1	145	246	187	334	10	455	97	18	78
(Ribosomal_L27A);(Ribosomal_L4)	2	22	29	187	334	10	430	100	0	12
(Ribosomal_L27A);(Ribosomal_L4)	3	12	22	187	334	10	355	100	41	6
(Ribosomal_L31);(Ribosomal_L5)_(Ribosomal_L5_C)	1	72	153	101	205	10	962	100	15	71
(Ribosomal_L31);(Ribosomal_L5)_(Ribosomal_L5_C)	2	10	11	101	205	10	659	100	18	10
(AAA);(Proteasome_A_N)_(Proteasome)	1	11	11	16	16	61	398	100	82	69
(DSS1_SEM1);(RPN7)_(PCI)	1	16	16	21	21	10	684	100	56	76
(JAB);(JAB)_(MitMem_reg)	1	21	23	27	30	19	2958	100	70	78
(JAB)_(MitMem_reg);(RPN7)_(PCI)	1	17	18	24	25	10	489	100	50	71
(Proteasome);(Proteasome)_(Pr_beta_C)	1	34	278	34	334	15	1109	100	82	100
(Proteasome);(Proteasome)_(Pr_beta_C)	2	23	227	34	334	17	891	100	77	68
(Proteasome);(Proteasome)_(Pr_beta_C)	3	23	265	34	334	17	1406	100	82	68
(Proteasome);(Proteasome_A_N)_(Proteasome)	1	44	295	44	349	10	424	100	76	100
(Proteasome);(Proteasome_A_N)_(Proteasome)	2	44	295	44	349	10	493	100	77	100
(Proteasome)_(Pr_beta_C);(Proteasome_A_N)_(Proteasome)	1	34	235	34	334	10	634	100	72	100
(Proteasome)_(Pr_beta_C);(Proteasome_A_N)_(Proteasome)	2	34	274	34	334	15	637	100	76	100
(AAA);(Prot_ATP_ID_OB)_(AAA)	1	12	12	12	12	34	3014	100	33	100
(JAB)_(MitMem_reg);(VWA_2)	1	14	14	14	14	48	628	100	57	100
(Prot_ATP_ID_OB)_(AAA);(Proteasome_A_N)_(Proteasome)	1	12	12	15	15	36	417	100	58	80
(ubiquitin);(UCH)	1	10	16	10	16	10	1810	100	88	100
(Ribosomal_L10);(Ribosomal_L11_N)_(Ribosomal_L11)	1	13	13	30	30	10	251	100	38	43
(Peptidase_C48);(Rad60-SLD)	1	10	14	10	14	15	1026	100	86	100
(Peptidase_S8);(potato_inhibit)	1	11	29	11	29	32	835	100	100	100
(DNA_RNApol_7kD);(RNA_pol_A_bac)	1	50	149	50	150	20	572	100	60	100
(DNA_RNApol_7kD);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_ Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_( RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	40	141	40	141	16	1004	100	57	100
(RNA_pol_A_bac);(RNA_pol_L_2)	1	50	150	50	150	10	2027	100	70	100
(RNA_pol_A_bac);(RNA_pol_N)	1	50	150	50	150	20	1104	100	81	100
(RNA_pol_A_bac);(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_R pb1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(R NA_pol_Rpb1_5)_(RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5)	1	22	100	25	121	51	360	100	70	88
(RNA_pol_A_bac);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_R pb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_(R NA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	37	133	37	133	22	1697	100	80	100
(RNA_pol_L_2);(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb 1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA _pol_Rpb1_5)_(RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5)	1	34	130	34	130	37	958	100	54	100
(RNA_pol_L_2);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb 2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_(RNA _pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	38	136	40	141	23	443	100	70	95
(RNA_POL_M_15KD)_(TFIIS_C);(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2) _(RNA_pol_Rpb1_3)_(RNA_pol_Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol _Rpb1_6)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5)	1	35	131	35	131	44	1539	100	77	100
(RNA_POL_M_15KD)_(TFIIS_C);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2) _(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol _Rpb2_5)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	34	130	37	133	44	1370	100	65	92
(RNA_pol_N);(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_ 1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_(RNA_p ol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	40	141	40	141	37	1528	100	80	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb2_1)_(RNA_pol_R pb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_3)_(RNA_pol_Rpb2_4)_(R NA_pol_Rpb2_5)_(RNA_pol_Rpb2_6)_(RNA_pol_Rpb2_7)	1	32	128	34	130	53	9073	100	68	94
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb5_N)_(RNA_pol_R pb5_C)	1	35	131	35	131	43	2106	100	76	100
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb6)	1	34	128	35	131	53	1893	100	75	97
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(RNA_pol_Rpb8)	1	34	130	35	131	29	1465	100	75	97
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(SHS2_Rpb7-N)_(S1)	1	27	76	28	77	10	591	100	57	96
(RNA_pol_Rpb1_1)_(RNA_pol_Rpb1_2)_(RNA_pol_Rpb1_3)_(RNA_pol_ Rpb1_4)_(RNA_pol_Rpb1_5)_(RNA_pol_Rpb1_6)_(RNA_pol_Rpb1_5)_( RNA_pol_Rpb1_7)_(RNA_pol_Rpb1_5);(TF_Zn_Ribbon)_(TFIIB)_(TFI IB)	1	16	17	16	17	33	2020	100	18	100
(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_ Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_(RNA_pol_Rpb2_6)_( RNA_pol_Rpb2_7);(TF_Zn_Ribbon)_(TFIIB)_(TFIIB)	1	16	17	16	17	33	1742	100	12	100
(RNA_pol_Rpb2_1)_(RNA_pol_Rpb2_2)_(RNA_pol_Rpb2_1)_(RNA_pol_ Rpb2_3)_(RNA_pol_Rpb2_4)_(RNA_pol_Rpb2_5)_(RNA_pol_Rpb2_6)_( RNA_pol_Rpb2_7);(TFIIF_beta)	1	12	12	12	12	33	1378	100	8	100
(RNA_pol_Rpb4);(SHS2_Rpb7-N)_(S1)	1	33	86	35	89	10	2042	100	58	94
(RNA_pol_Rpb6);(SHS2_Rpb7-N)_(S1)	1	29	68	31	85	17	443	99	49	94
(TBP)_(TBP);(TF_Zn_Ribbon)_(TFIIB)_(TFIIB)	1	13	13	13	13	33	516	100	8	100
(TBP)_(TBP);(TFIIA_gamma_N)_(TFIIA_gamma_C)	1	16	17	16	17	40	454	100	29	100
(TFIIF_alpha);(TFIIF_beta)	1	11	11	15	15	16	2113	100	9	73
(EF-hand_6)_(EF-hand_7);(Myosin_N)_(Myosin_head)_(IQ)_(IQ)	1	12	12	14	15	40	1540	100	8	86
(RuBisCO_large_N)_(RuBisCO_large);(RuBisCO_small)	1	11	44	11	44	31	890	98	91	100
(RuBisCO_large_N)_(RuBisCO_large);(RuBisCO_small)	2	11	44	11	44	31	1789	100	95	100
(RuBisCO_large_N)_(RuBisCO_large);(RuBisCO_small)	3	11	44	11	44	31	453	98	89	100
(Kinesin);(Tubulin)_(Tubulin_C)	1	16	16	31	31	28	549	94	12	52
(Kinesin);(Tubulin)_(Tubulin_C)	2	16	16	31	31	28	616	94	12	52
(Inhibitor_I9);(Peptidase_S8)	1	16	25	16	25	10	1266	96	100	100
(Kunitz_BPTI);(Trypsin)	1	36	90	37	91	16	677	100	99	97
(DUF3364)_(Oxidored_nitro);(Oxidored_nitro)	1	10	29	10	31	12	4534	100	97	100
(DUF3364)_(Oxidored_nitro);(Oxidored_nitro)	2	10	29	10	31	53	1302	100	97	100
(PKI);(Pkinase)	1	14	109	15	163	85	986	94	96	93
(PKI);(Pkinase)	2	11	132	15	163	79	400	2	2	73
(Polyketide_cyc2);(PP2C)	1	11	17	12	20	39	874	100	100	92
(Gla)_(EGF)_(FXa_inhibition);(Trypsin)	1	12	91	12	93	37	896	96	98	100
(Ricin_B_lectin)_(Ricin_B_lectin);(RIP)	1	11	39	11	39	29	1551	100	97	100
(TNF);(TNFR_c6)_(TNFR_c6)_(TNFR_c6)_(TNFR_c6)	1	10	15	10	17	10	504	100	80	100
(TNF);(TNFR_c6)_(TNFR_c6)_(TNFR_c6)_(TNFR_c6)	2	10	15	10	17	10	654	100	80	100
(Skp1_POZ);(ubiquitin)	1	16	38	16	39	10	1060	100	92	100
(CBFD_NFYB_HMF);(Histone)	1	45	164	45	177	14	2446	100	97	100
(CBFD_NFYB_HMF);(Histone)	2	19	90	45	177	10	496	98	96	42
(CBFD_NFYB_HMF);(Histone)	3	19	94	45	177	76	270	98	94	42
(Thrombin_light);(Trypsin)	1	99	292	102	492	10	1183	100	99	97
(Thrombin_light);(Trypsin)	2	20	33	102	492	74	265	3	15	20
(Med17);(Med6)	1	10	10	10	10	10	740	100	20	100
(ubiquitin);(UQ_con)	1	14	14	32	39	29	797	100	71	44
(Ribosomal_L28);(Ribosomal_L9_N)_(Ribosomal_L9_C)	2	35	109	120	239	10	242	98	8	29
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S13)	1	76	121	156	228	10	304	100	17	49
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S13)	2	24	24	156	228	67	293	0	0	15
(Ribosomal_L5)_(Ribosomal_L5_C);(Ribosomal_S19)	1	17	31	19	33	59	274	0	0	89
(Ribosomal_S11);(Ribosomal_S21)	1	87	111	107	135	10	1039	96	18	81
(Ribosomal_S18);(Ribosomal_S21)	1	51	74	83	110	10	253	95	15	61
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)	1	21	50	21	51	10	495	100	94	100
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)	2	19	49	21	51	23	566	100	94	90
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)	3	17	46	21	51	23	521	100	98	81
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C)	1	19	49	21	51	10	580	100	94	90
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C)	2	17	47	21	51	23	250	100	94	81
(ATP-synt);(ATP-synt_ab_N)_(ATP-synt_ab)_(ATP-synt_ab_C)	3	15	31	21	51	31	270	100	97	71
(ATP-synt);(ATP-synt_DE_N)_(ATP-synt_DE)	1	11	24	28	42	10	813	100	100	39
(ATP-synt);(ATP-synt_Eps)	1	17	30	20	33	10	769	100	100	85
(ATP-synt_ab_N)_(ATP-synt_ab);(ATP-synt_ab_N)_(ATP-synt_ab)_ (ATP-synt_ab_C)	1	31	62	38	69	53	2007	100	94	82
(ATP-synt_DE_N)_(ATP-synt_DE);(ATP-synt_Eps)	1	14	27	19	32	10	649	100	89	74
(CBFD_NFYB_HMF);(Histone)_(Histone_H2A_C)	1	25	140	26	150	12	423	99	96	96
(Histone);(Histone)_(Histone_H2A_C)	1	28	147	35	163	44	676	99	96	80
(Histone);(Histone)_(Histone_H2A_C)	2	28	103	35	163	10	2500	100	92	80