Protein Common Interface Database

Domain Clusters with M>=10,SeqId<90 and diff Pfam relation

Pfam Architecture	Cluster#	#CFs/Cluster	#Entries/Cluster	#CFs/Group	#Entries/Group	Minimum Seq Identity	Surface Area	In PDBBA(%)	In PISABA(%)	CFs Cluster/Group(%)
(Fe_dep_repr_C);(Fe_dep_repress)	1	27	64	27	64	14	625	100	97	100
(Fe_dep_repr_C);(FeoA)	1	10	17	10	17	8	496	100	94	100
(Fer2_3);(Sdh_cyt)	1	13	67	13	67	6	569	100	96	100
(Fib_alpha);(Fibrinogen_C)	1	18	35	18	35	32	392	100	89	100
(PPR_1);(PPR_2)	1	15	16	15	16	12	477	100	94	100
(Helicase_C);(SnAC)	1	10	10	13	13	27	326	100	30	77
(QRPTase_C);(QRPTase_N)	1	16	29	16	29	15	913	100	100	100
(5_3_exonuc);(5_3_exonuc_N)	1	11	22	12	23	18	1526	100	100	92
(L31);(Ribosomal_L30)	1	10	10	10	10	30	750	100	10	100
(Formyl_trans_C);(Formyl_trans_N)	1	26	48	28	52	5	664	100	100	93
(MRP-L28);(Ribosomal_L5)	1	10	10	10	10	9	505	100	10	100
(MRP-L28);(Ribosomal_L5_C)	1	10	10	10	10	9	585	100	10	100
(RNA_polI_A14);(SHS2_Rpb7-N)	1	36	40	36	40	2	723	100	72	100
(GARS_A);(GARS_C)	1	12	16	12	16	28	881	100	94	100
(GARS_A);(GARS_N)	1	12	16	12	16	27	953	100	94	100
(GARS_C);(GARS_N)	1	12	16	12	16	27	376	100	94	100
(Ribosomal_L11);(Ribosomal_TL5_C)	1	10	13	27	42	38	130	100	0	37
(GCV_T);(GCV_T_C)	1	18	33	19	40	10	1217	100	100	95
(GDNF);(TGF_beta)	1	15	15	15	15	20	799	100	53	100
(HAV_VP);(Rhv)	1	12	12	15	16	4	630	100	0	80
(HAV_VP);(Rhv)	2	11	11	15	16	13	592	100	0	73
(HGTP_anticodon);(tRNA-synt_His)	1	16	41	16	41	14	790	100	98	100
(Eno-Rase_FAD_bd);(Eno-Rase_NADH_b)	1	10	19	10	19	39	751	100	100	100
(Eno-Rase_FAD_bd);(Enoyl_reductase)	1	10	18	10	19	39	1987	100	100	100
(Eno-Rase_NADH_b);(Enoyl_reductase)	1	10	19	10	19	41	2690	100	100	100
(Methyltr_RsmB-F);(Methyltr_RsmF_N)	1	13	20	14	21	7	1677	100	100	93
(NAD_Gly3P_dh_C);(NAD_Gly3P_dh_N)	1	12	21	12	21	15	372	95	95	100
(NAD_Gly3P_dh_C);(NAD_Gly3P_dh_N)	2	12	21	12	21	15	1089	100	100	100
(SusD_RagB);(TonB_dep_Rec)	1	11	14	11	14	12	883	50	50	100
(SusD-like_3);(TonB_dep_Rec)	1	11	14	11	14	16	2178	43	43	100
(RNA_pol_Rpb2_2);(zf-dskA_traR)	1	10	10	13	13	35	504	100	0	77
(RNA_pol_Rpb1_4);(zf-dskA_traR)	1	14	14	14	14	35	332	100	14	100
(RNA_pol_I_TF);(Rrn6)	1	13	13	17	17	71	810	100	54	76
(GLF);(NAD_binding_8)	1	11	33	11	33	37	2567	100	100	100
(AAA_lid_3);(Ank_2)	1	14	15	14	15	25	430	100	20	100
(EF-hand_1);(EzrA)	1	11	13	11	13	34	345	85	54	100
(IATP);(T3SS_ATPase_C)	1	24	26	24	27	20	430	100	27	100
(IATP);(T3SS_ATPase_C)	2	12	14	24	27	20	182	100	50	50
(RNA_polI_A14);(RPA43_OB)	1	29	33	35	39	70	258	100	67	83
(Mitoc_mL59);(Ribosomal_L33)	1	11	11	11	11	12	485	100	9	100
(ATP-synt_DE);(T3SS_ATPase_C)	1	14	14	18	18	36	317	36	14	78
(ATP-synt_DE);(T3SS_ATPase_C)	2	14	14	18	18	36	313	36	14	78
(Neuraminidase);(TcA_RBD)	1	13	13	13	13	25	172	100	92	100
(NUC);(RuvC_1)	1	20	24	25	30	27	966	100	71	80
(Mt_ATP-synt_B);(WRW)	1	17	17	25	25	88	361	94	29	68
(ATP-synt_8);(Mt_ATP-synt_D)	1	22	22	25	25	56	280	100	23	88
(ATP-synt_A);(WRW)	1	25	25	25	25	80	470	100	24	100
(ATP_synth_reg);(ATP-synt_A)	1	18	18	24	24	80	390	100	28	75
(ATP-synt_8);(ATP-synt_A)	1	25	25	25	25	56	908	100	24	100
(ATP-synt_8);(Mt_ATP-synt_B)	1	10	10	22	22	89	252	100	50	45
(Flavodoxin_1);(ODP)	1	12	20	13	22	10	489	95	95	92
(Flavodoxin_1);(ODP)	2	12	20	13	22	10	527	100	100	92
(Anticodon_2);(tRNA-synt_1c)	1	17	26	17	26	14	332	96	100	100
(Ank_2);(SBP_bac_1)	1	10	10	10	10	78	429	90	30	100
(Rpn3_C);(ZapB)	1	19	19	23	23	2	286	100	26	83
(HEAT_2);(ZapB)	1	23	23	23	23	2	296	100	26	100
(RPN1_RPN2_N);(ZapB)	1	22	22	23	23	2	382	100	27	96
(HCV_NS1);(V-set_2)	1	10	10	11	11	60	787	100	100	91
(ASMase_C);(Metallophos)	1	11	15	11	18	22	2411	100	100	100
(SnAC);(SNF2-rel_dom)	1	10	10	10	10	27	460	100	30	100
(ATP-synt_A);(VBS)	1	27	27	27	27	51	945	100	89	100
(ATP-synt_E);(ATP-synt_G)	1	20	20	20	20	76	646	100	30	100
(ATP-synt_G);(Mt_ATP-synt_B)	1	19	19	20	20	82	200	100	26	95
(ATP-synt_G);(WRW)	1	20	20	20	20	82	233	100	30	100
(Mit_proteolip);(Mt_ATP-synt_D)	1	10	10	15	15	88	127	100	50	67
(ATP-synt_A);(Mit_proteolip)	1	20	20	20	20	80	288	100	30	100
(ATP-synt_8);(Mit_proteolip)	1	11	11	20	20	56	520	100	45	55
(Rho_RNA_bind);(RNA_pol_Rpb2_1)	1	10	10	11	11	82	211	100	40	91
(GNVR);(Wzz)	1	14	15	14	15	20	1201	100	93	100
(PPO1_DWL);(Tyrosinase)	1	12	34	14	37	11	1491	100	100	86
(Glyco_hydro_42);(Glyco_hydro_42C)	1	10	15	10	15	7	693	100	100	100
(Sortilin_C);(Sortilin-Vps10)	1	13	16	13	19	22	2720	100	100	100
(Herpes_capsid);(Herpes_MCP)	1	11	11	11	11	22	1810	100	0	100
(Herpes_capsid);(Herpes_MCP)	2	11	11	11	11	22	585	100	0	100
(FAM181);(YBD)	1	10	19	10	20	15	1114	100	100	100
(ResIII);(RIG-I_C)	1	10	13	11	16	56	333	100	100	91
(CCDC23);(Vasohibin)	1	17	23	17	23	61	1216	100	96	100
(PRELI);(UPF0203)	1	10	12	10	12	27	1144	100	100	100
(QRPTase_C);(QRPTase_N)	2	16	29	16	29	15	1096	100	100	100
(ACT);(ACT_7)	1	11	14	14	17	8	558	100	100	79
(ADAM_CR);(Disintegrin)	1	10	12	12	14	26	187	100	92	83
(GST_C_4);(GST_N_3)	1	10	14	10	14	4	585	100	93	100
(Gelsolin);(Sec23_helical)	1	12	29	13	30	10	250	100	97	92
(Gelsolin);(Sec23_trunk)	1	10	27	15	32	11	264	100	96	67
(ATP-synt);(IATP)	1	24	26	24	27	25	289	100	27	100
(ATP-synt_F6);(Mt_ATP-synt_D)	1	16	16	29	29	88	263	100	50	55
(ATP-synt_F6);(OSCP)	1	13	13	15	15	86	187	100	31	87
(ATP-synt_ab);(IATP)	1	10	10	21	24	88	205	100	30	48
(ATP-synt_ab_C);(IATP)	1	23	25	24	27	25	253	100	28	96
(Glyco_transf_7C);(Glyco_transf_7N)	1	12	37	12	45	31	1613	100	89	100
(HA2);(Helicase_C)	1	20	37	35	59	18	288	100	97	57
(HA2);(OB_NTP_bind)	1	34	57	34	58	11	1088	100	96	100
(HABP4_PAI-RBP1);(Ribosomal_L7Ae)	1	13	15	20	33	6	152	100	33	65
(HMG_CoA_synt_C);(HMG_CoA_synt_N)	1	19	29	19	29	2	823	76	100	100
(HMG_CoA_synt_C);(HMG_CoA_synt_N)	2	18	27	19	29	2	3527	100	100	95
(UreE_C);(UreE_N)	1	11	13	11	13	4	388	100	92	100
(Arg_tRNA_synt_N);(DALR_1)	1	11	15	13	17	9	318	100	100	85
(Helicase_C);(OB_NTP_bind)	1	26	44	32	56	12	295	100	98	81
(Hormone_recep);(SRC-1)	1	23	57	25	60	17	457	96	100	92
(HpaB);(HpaB_N)	1	12	19	12	19	13	1066	100	100	100
(HpaB);(HpaB_N)	2	12	19	12	19	13	2286	100	100	100
(HpaB);(HpaB_N)	3	10	16	12	19	13	203	100	100	83
(Hydrolase_6);(Hydrolase_like)	1	28	41	28	43	11	1204	100	100	100
(3HCDH);(3HCDH_N)	1	34	72	36	79	13	419	99	90	94
(3HCDH);(3HCDH_N)	2	11	30	36	79	22	431	100	80	31
(ICAM_N);(Ig_3)	1	10	11	11	12	26	473	100	91	91
(6PGD);(NAD_binding_2)	1	15	29	16	30	26	1009	100	100	94
(7tm_1);(Rhodopsin_N)	1	17	53	17	53	88	868	100	89	100
(ABC_tran);(CbiQ)	1	10	11	10	11	14	802	100	91	100
(ABC_tran);(CbiQ)	2	10	11	10	11	14	1388	100	91	100
(Glyco_hydro_81);(Glyco_hydro81C)	1	10	14	10	14	11	3094	100	100	100
(KH_1);(RNase_PH)	1	10	11	12	13	21	189	100	91	83
(KOW);(Ribosomal_L26)	1	14	14	15	14	59	674	100	7	93
(CRPV_capsid);(Rhv)	1	27	27	28	28	7	1075	93	37	96
(Calici_coat);(CRPV_capsid)	1	29	30	29	30	12	2544	93	27	100
(Kringle);(PAN_1)	1	17	28	17	29	21	371	96	79	100
(Kringle);(PAN_1)	2	14	25	17	29	44	224	100	80	82
(Kunitz_legume);(Trypsin)	1	13	21	15	23	26	968	100	100	87
(Cohesin);(Dockerin_1)	1	15	16	26	28	6	778	94	100	58
(Cohesin);(Dockerin_1)	2	11	12	26	28	10	751	100	100	42
(LSM);(U1snRNP70_N)	1	10	10	12	12	18	241	100	20	83
(LSM);(U1snRNP70_N)	2	10	10	12	12	13	869	100	20	83
(Lig_chan);(SBP_bac_3)	1	23	43	23	48	5	772	100	74	100
(Lig_chan-Glu_bd);(SBP_bac_3)	1	24	49	24	54	14	2502	100	78	100
(Lig_chan-Glu_bd);(SBP_bac_3)	2	20	43	24	54	14	257	98	67	83
(Lipase);(PLAT)	1	13	17	13	17	17	452	100	71	100
(Lipase_3);(Lipase3_N)	1	16	34	16	35	13	716	100	100	100
(Lyase_8);(Lyase_8_N)	1	13	43	13	43	16	1569	100	100	100
(Lys);(V-set)	1	14	42	43	91	21	397	100	17	33
(Lys);(V-set)	2	13	41	43	91	22	520	98	15	30
(MR_MLE_C);(MR_MLE_N)	1	167	287	167	288	1	1719	98	98	100
(MR_MLE_C);(MR_MLE_N)	2	92	163	167	288	3	319	80	89	55
(MR_MLE_C);(MR_MLE_N)	3	68	115	167	288	11	129	67	89	41
(Me-amine-dh_H);(Me-amine-dh_L)	1	16	69	16	69	13	545	94	96	100
(Me-amine-dh_H);(Me-amine-dh_L)	2	16	47	16	69	13	1345	100	94	100
(Med11);(Med17)	1	20	20	20	20	11	1014	100	15	100
(Med11);(Med22)	1	21	21	21	21	11	1223	95	19	100
(Med17);(Med22)	1	19	19	20	20	4	988	100	16	95
(Med17);(Med6)	1	18	18	19	19	12	486	100	11	95
(Med17);(Med8)	1	12	12	19	19	21	910	100	17	63
(Med18);(Med20)	1	19	19	19	19	8	1268	100	26	100
(Med18);(Med22)	1	11	11	14	14	84	182	100	18	79
(Med21);(Med7)	1	13	14	14	15	18	1599	100	21	93
(Med22);(Med6)	1	15	15	19	19	11	398	100	13	79
(Med22);(Med8)	1	13	13	19	19	11	794	100	15	68
(Med31);(Med7)	1	14	15	14	15	25	991	100	20	100
(Med6);(Med8)	1	17	17	19	19	12	940	100	12	89
(AMP_N);(Peptidase_M24)	1	12	59	12	63	9	385	100	100	100
(AMP_N);(Peptidase_M24)	2	11	56	12	63	9	600	98	98	92
(ANAPC1);(TPR_16)	1	10	10	10	10	53	258	30	20	100
(Mo-co_dimer);(Oxidored_molyb)	1	13	25	14	26	19	1383	100	100	93
(MoCF_biosynth);(MoeA_C)	1	11	49	11	49	18	701	100	96	100
(MoCF_biosynth);(MoeA_N)	1	13	51	13	51	25	857	94	86	100
(MoCF_biosynth);(MoeA_N)	2	11	49	13	51	25	825	100	96	85
(MoeA_C);(MoeA_N)	1	13	51	13	51	19	340	94	86	100
(ASL_C);(Lyase_1)	1	11	14	11	14	39	484	93	100	100
(ASL_C);(Lyase_1)	2	11	14	11	14	39	2443	100	100	100
(ASL_C);(Lyase_1)	3	10	13	11	14	39	933	100	100	91
(DCP1);(DCP2)	1	10	11	10	11	25	810	100	73	100
(NGP1NT);(NOG1)	1	13	13	13	13	43	439	100	31	100
(Dioxygenase_C);(Dioxygenase_N)	1	13	30	13	30	11	922	100	100	100
(Dioxygenase_C);(Dioxygenase_N)	2	12	29	13	30	11	217	100	100	92
(G-alpha);(RGS)	1	12	12	13	13	35	866	100	8	92
(GAD);(tRNA-synt_2)	1	12	16	12	17	18	234	100	100	100
(GCD14);(GCD14_N)	1	12	15	12	15	10	839	100	100	100
(GST_C_2);(GST_N_2)	1	12	19	14	21	10	459	100	100	86
(ASL_C2);(Lyase_1)	1	11	28	11	28	26	325	96	100	100
(ASL_C2);(Lyase_1)	2	11	27	11	28	26	286	96	100	100
(ASL_C2);(Lyase_1)	3	11	28	11	28	26	290	100	100	100
(ATLF);(Binary_toxB)	1	11	11	11	11	37	749	100	36	100
(ATLF);(Binary_toxB)	2	10	10	11	11	37	602	100	40	91
(Acetyltransf_1);(NARP1)	1	14	17	14	17	31	1211	100	76	100
(Actin);(Exo_endo_phos)	1	10	10	10	10	67	889	90	100	100
(Actin);(Rtt102p)	1	12	12	12	12	16	1251	100	17	100
(Actin);(WH2)	1	14	16	15	18	7	829	81	88	93
(Alba);(Rpp20)	1	10	10	10	10	12	603	100	30	100
(Alpha-amylase);(CBM_20)	1	12	56	12	56	34	786	100	100	100
(Alpha-amylase);(DUF1939)	1	20	40	20	40	8	406	100	100	100
(Alpha-amylase);(TIG)	1	12	56	12	56	34	479	100	100	100
(ApbA);(ApbA_C)	1	20	23	20	23	13	859	100	100	100
(B3_4);(B5)	1	11	22	14	32	25	159	100	95	79
(B3_4);(B5)	2	10	17	14	32	30	421	100	94	71
(B3_4);(tRNA-synt_2d)	1	11	28	14	34	38	177	96	89	79
(B3_4);(tRNA_bind)	1	10	22	11	29	27	279	100	95	91
(BPL_C);(BPL_LplA_LipB)	1	13	63	14	69	10	539	100	100	93
(Beta-Casp);(RMMBL)	1	11	22	11	22	9	666	100	91	100
(Bgal_small_N);(DUF4981)	1	19	92	19	92	14	321	100	88	100
(Bgal_small_N);(Glyco_hydro_2_C)	1	19	92	19	92	19	1482	100	88	100
(Bromo_TP);(TFIID_30kDa)	1	26	26	26	26	50	1373	100	15	100
(Bud13);(RRM_1)	1	13	14	13	14	25	889	100	7	100
(C1-set);(IgG_binding_B)	1	12	12	13	13	6	148	83	0	92
(C2-set);(ig)	1	33	48	34	49	76	551	98	79	97
(CKS);(Pkinase)	1	10	14	10	14	66	710	100	93	100
(CRM1_C);(Ras)	1	17	76	18	77	44	214	100	68	94
(CTP_synth_N);(GATase)	1	29	40	29	40	40	940	100	30	100
(CarD_CdnL_TRCF);(RNA_pol_Rpb2_1)	1	24	24	24	24	18	483	71	8	100
(Cbl_N);(Cbl_N2)	1	22	35	23	36	27	597	100	100	96
(Cbl_N);(Cbl_N3)	1	22	35	24	37	27	364	100	100	92
(Cbl_N2);(Cbl_N3)	1	22	35	24	38	42	665	100	100	92
(Citrate_bind);(Ligase_CoA)	1	18	26	18	26	23	729	100	58	100
(Creatinase_N);(Peptidase_M24)	1	21	33	24	38	7	490	100	100	88
(Creatinase_N);(Peptidase_M24)	2	20	30	24	38	5	536	100	100	83
(Cu-oxidase_2);(F5_F8_type_C)	1	10	10	13	13	36	196	100	90	77
(Cyclin_C);(Cyclin_N)	1	28	82	41	169	6	1381	100	99	68
(DALR_1);(tRNA-synt_1d)	1	13	17	14	18	19	1688	100	100	93
(DEAD);(HA2)	1	16	31	22	41	16	198	100	97	73
(DIM1);(PROCN)	1	10	10	11	11	66	602	100	50	91
(DIM1);(Prp31_C)	1	10	10	10	10	25	414	100	50	100
(DIM1);(U6-snRNA_bdg)	1	10	10	10	10	66	259	100	50	100
(DNA_gyraseB_C);(Toprim)	1	21	35	23	45	34	1281	100	91	91
(DNA_topoisoIV);(TOPRIM_C)	1	14	24	14	24	18	579	100	88	100
(DNA_topoisoIV);(TOPRIM_C)	2	10	11	14	24	18	271	82	73	71
(DSL);(MNNL)	1	12	13	12	13	37	819	100	100	100
(DUF3591);(TAFII55_N)	1	19	19	19	19	28	2700	100	16	100
(DUF4981);(Glyco_hydro_2)	1	17	74	17	74	14	165	100	85	100
(DUF4981);(Glyco_hydro_2_C)	1	19	92	19	92	14	1000	100	88	100
(DUF5089);(SNARE)	1	15	18	21	25	40	582	100	89	71
(DUF5089);(Synaptobrevin)	1	17	20	19	23	7	651	100	85	89
(DUF5089);(Syntaxin)	1	18	20	21	25	16	936	100	90	86
(DXP_redisom_C);(DXPR_C)	1	24	75	24	75	26	1568	100	100	100
(DXP_redisom_C);(DXPR_C)	2	19	57	24	75	26	166	100	100	79
(DXP_redisom_C);(DXP_reductoisom)	1	24	75	24	75	22	588	100	100	100
(DXP_reductoisom);(DXPR_C)	1	24	75	24	75	22	923	100	100	100
(Dynamin_M);(Dynamin_N)	1	34	41	34	42	1	1440	100	85	100
(Dynamin_M);(GED)	1	22	24	22	24	6	2980	100	79	100
(Dynamin_M);(GED)	2	12	12	22	24	14	443	83	58	55
(E1_DerP2_DerF2);(LRRNT)	1	10	10	14	14	49	115	70	70	71
(E1_DerP2_DerF2);(LRR_8)	1	13	13	14	14	4	231	85	69	93
(E1_FCCH);(ubiquitin)	1	11	14	12	15	45	206	100	100	92
(E1_dh);(Transketolase_C)	1	12	44	12	44	25	389	100	100	100
(ECR1_N);(RNase_PH)	1	19	22	22	28	24	197	100	73	86
(ECR1_N);(RNase_PH_C)	1	17	20	22	26	18	172	100	70	77
(EF-hand_1);(EF-hand_8)	1	14	14	29	29	32	189	100	43	48
(EF-hand_7);(Myosin_head)	1	10	10	59	77	26	595	100	20	17
(EFP_N);(eIF-5a)	1	13	15	13	15	12	376	100	100	100
(EXOSC1);(RNase_PH)	1	11	11	19	21	89	207	100	55	58
(Endotoxin_C);(Endotoxin_M)	1	15	22	15	22	8	769	100	100	100
(Endotoxin_C);(Endotoxin_N)	1	15	22	16	23	13	419	100	100	94
(Endotoxin_M);(Endotoxin_N)	1	14	21	15	22	16	1172	100	100	93
(Ephrin);(Ephrin_lbd)	1	10	10	16	16	26	1094	100	90	62
(Exonuc_V_gamma);(UvrD-helicase)	1	11	17	12	20	16	1644	100	88	92
(FDX-ACB);(tRNA-synt_2d)	1	12	28	14	40	31	263	96	93	86
(FGF);(I-set)	1	14	17	15	18	22	593	100	94	93
(FGGY_C);(FGGY_N)	1	40	86	40	87	8	1886	99	98	100
(FGGY_C);(FGGY_N)	2	12	22	40	87	33	203	82	95	30
(PBP5_C);(Peptidase_S11)	1	12	24	12	24	13	443	100	100	100
(PDGF);(V-set)	1	12	15	17	20	25	410	93	67	71
(PDZ_2);(Trypsin_2)	1	24	40	36	67	16	264	100	95	67
(PDZ_2);(Trypsin_2)	2	10	15	36	67	20	213	93	80	28
(PNP_phzG_C);(Putative_PNPOx)	1	10	20	10	22	24	1249	100	100	100
(PNPase);(RNase_PH)	1	17	19	18	21	18	206	100	89	94
(PNPase);(RNase_PH_C)	1	16	18	16	18	18	603	100	94	100
(PRO8NT);(Torus)	1	18	18	18	18	37	257	100	11	100
(PROCN);(Torus)	1	18	18	19	19	37	373	100	11	95
(PRP3);(Ribosomal_L7Ae)	1	11	11	11	11	26	311	100	45	100
(PSI);(TIG)	1	18	18	19	19	15	453	100	67	95
(PapC_N);(Usher)	1	10	10	10	10	12	1361	100	50	100
(Peptidase_C12);(ubiquitin)	1	11	13	11	13	21	860	100	100	100
(Peptidase_C48);(Rad60-SLD)	1	12	14	12	15	11	543	100	86	100
(Peptidase_M10);(PG_binding_1)	1	10	13	12	16	29	291	100	77	83
(Peptidase_M13);(Peptidase_M13_N)	1	10	25	10	25	14	3576	100	88	100
(PolyA_pol);(PolyA_pol_RNAbd)	1	13	38	15	40	12	308	95	95	87
(PrgH);(YscJ_FliF)	1	12	12	14	14	17	708	100	0	86
(Prp31_C);(U5_2-snRNA_bdg)	1	10	10	10	10	25	264	100	50	100
(Prp31_C);(U6-snRNA_bdg)	1	10	10	10	10	25	950	100	50	100
(PsaX);(PSI_PsaF)	1	11	16	14	19	55	120	100	69	79
(RNase_PH);(RNase_PH_C)	1	51	69	51	70	3	499	100	87	100
(RNase_P_p30);(RNase_P_Rpp14)	1	11	11	11	11	13	641	100	18	100
(Ras);(RasGEF)	1	10	41	10	64	19	1393	100	98	100
(Ras);(RhoGAP)	1	13	14	13	14	21	1014	100	100	100
(Ras);(Xpo1)	1	22	82	23	83	12	436	98	66	96
(RbpA);(Sigma70_r1_2)	1	21	25	21	26	41	485	100	36	100
(RbpA);(Sigma70_r2)	1	21	25	21	26	77	316	100	36	100
(Ribosom_S12_S23);(RRF)	1	10	12	11	13	25	415	100	0	91
(Ribosomal_L11);(Ribosomal_L37)	1	23	24	23	24	10	982	100	12	100
(Ribosomal_L23eN);(RRM_1)	1	10	10	11	11	59	385	100	40	91
(Ribosomal_L30_N);(RRM_1)	1	17	17	20	20	49	480	100	53	85
(Ribosomal_L7Ae);(RRM_1)	1	16	16	18	19	77	163	100	56	89
(Ribosomal_S17);(Ribosomal_S17_N)	1	11	11	11	11	67	941	100	18	100
(SET);(TPR_12)	1	16	48	16	52	16	516	100	100	100
(SNARE);(Synaptobrevin)	1	27	30	27	31	25	682	97	70	100
(SSL_OB);(Stap_Strp_tox_C)	1	34	39	36	41	11	1128	97	97	94
(Sacchrp_dh_C);(Sacchrp_dh_NADP)	1	13	28	13	29	7	1743	100	100	100
(Sec23_BS);(Sec23_helical)	1	12	29	12	29	13	406	100	97	100
(Sec23_BS);(Sec23_trunk)	1	12	29	13	30	12	720	100	97	92
(Sec23_BS);(zf-Sec23_Sec24)	1	12	29	12	29	13	477	100	97	100
(Sec23_helical);(Sec23_trunk)	1	12	29	16	33	12	755	100	97	75
(Skp1_POZ);(SOCS_box)	1	11	13	11	13	22	206	100	77	100
(Stap_Strp_tox_C);(Stap_Strp_toxin)	1	51	77	56	86	6	1150	99	94	91
(Stap_Strp_tox_C);(V-set)	1	12	18	19	25	21	213	100	39	63
(Stap_Strp_toxin);(V-set)	1	13	19	17	23	15	358	100	37	76
(TAFII28);(TFIID-18kDa)	1	18	19	18	19	56	1993	100	11	100
(TBP);(TFIIA)	1	13	15	17	19	10	392	100	33	76
(TFIIA);(TFIIA_gamma_C)	1	25	31	28	34	10	1129	100	32	89
(TFIIA);(TFIIA_gamma_N)	1	28	34	28	34	9	1167	100	38	100
(TPK_B1_binding);(TPK_catalytic)	1	11	13	11	13	9	477	100	77	100
(TPK_B1_binding);(TPK_catalytic)	2	10	12	11	13	10	190	100	100	91
(TPR_10);(TPR_12)	1	13	13	14	14	16	507	100	85	93
(TetR_C_2);(TetR_N)	1	10	22	10	22	7	637	100	100	100
(Thg1);(Thg1C)	1	10	16	10	16	19	1229	100	100	100
(Toprim);(TOPRIM_C)	1	14	24	14	24	28	1564	100	88	100
(Transket_pyr);(Transketolase_N)	1	20	65	20	70	22	875	98	100	100
(Transket_pyr);(Transketolase_N)	2	20	65	20	70	22	1610	100	100	100
(Transketolase_C);(Transketolase_N)	1	20	65	20	70	8	247	98	100	100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_C)	1	27	43	27	43	12	472	100	100	100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_N)	1	27	43	27	43	19	788	100	100	100
(UDPG_MGDP_dh);(UDPG_MGDP_dh_N)	2	25	40	27	43	20	262	98	100	93
(UDPG_MGDP_dh_C);(UDPG_MGDP_dh_N)	1	24	34	27	43	13	275	100	100	89
(UDPG_MGDP_dh_C);(UDPG_MGDP_dh_N)	2	11	19	27	43	60	312	95	89	41
(XPG_I);(XPG_N)	1	30	49	30	51	16	2084	100	96	100
(adh_short);(adh_short_C2)	1	11	15	13	18	12	1964	100	100	85
(eIF2_C);(GTP_EFTU)	1	17	28	18	41	35	661	100	96	94
(eIF2_C);(GTP_EFTU_D2)	1	18	39	18	41	35	365	100	97	100
(eRF1_2);(GTP_EFTU)	1	11	11	15	15	10	719	100	18	73
(eRF1_2);(GTP_EFTU_D3)	1	14	14	15	15	10	318	100	21	93
(eRF1_3);(Fer4)	1	11	11	11	11	15	227	100	18	100
(eRF1_3);(GTP_EFTU_D3)	1	16	16	17	17	14	529	100	19	94
(eRF1_3);(RLI)	1	11	11	11	11	15	290	100	18	100
(eRF1_3);(Ribosomal_L11_N)	1	10	10	14	14	80	311	100	10	71
(fn3);(IL12p40_C)	1	11	11	12	12	82	293	91	91	92
(ig);(Ig_2)	1	19	21	23	26	17	380	100	100	83
(peroxidase);(Peroxidase_ext)	1	23	73	23	73	28	2975	100	100	100
(tRNA_int_endo);(tRNA_int_endo_N)	1	13	13	16	16	10	589	100	100	81
(tRNA_int_endo);(tRNA_int_endo_N)	2	10	10	16	16	14	470	90	100	62
(Med21);(Med4)	1	10	10	11	11	27	575	100	10	91
(Flg_bb_rod);(Flg_bbr_C)	1	15	16	15	16	32	971	100	6	100
(Flg_bb_rod);(Flg_bbr_C)	2	11	12	15	16	34	248	100	8	73
(Flg_bb_rod);(Flg_bbr_C)	3	11	12	15	16	34	233	100	8	73
(Secretin);(Secretin_N)	1	22	22	23	23	12	469	100	27	96
(Secretin);(Secretin_N)	2	19	19	23	23	12	382	100	32	83
(RbpA);(RNA_pol_Rpb1_1)	1	19	23	19	24	84	1120	100	30	100
(Thiol_cytolys_C);(Thiol_cytolysin)	1	15	20	21	26	27	350	100	100	71
(Glycoprot_B_PH2);(Glycoprotein_B)	1	12	19	14	21	29	296	100	79	86
(Glycoprot_B_PH2);(Glycoprotein_B)	2	11	18	14	21	29	401	100	89	79
(Glycoprot_B_PH2);(Glycoprotein_B)	3	11	18	14	21	29	159	100	83	79
(Glycoprot_B_PH1);(Glycoprotein_B)	1	12	19	14	21	25	1056	100	79	86
(Glycoprot_B_PH1);(Glycoprotein_B)	2	11	18	14	21	25	556	100	78	79
(Glycoprot_B_PH1);(Glycoprot_B_PH2)	1	15	22	15	22	1	291	95	82	100
(TbpB_B_D);(TbpB_C)	1	14	18	14	18	3	1196	100	83	100
(TbpB_B_D);(TbpB_C)	2	10	13	14	18	26	273	100	92	71
(TbpB_A);(TbpB_B_D)	1	15	18	15	19	12	2025	100	89	100
(TbpB_A);(TbpB_C)	1	11	15	11	15	12	407	100	87	100
(Med14);(Med31)	1	12	12	12	12	27	656	100	8	100
(ABC_tran);(PDR_assoc)	1	14	14	15	18	80	117	100	50	93
(Ribosomal_S11);(WD40)	1	19	19	25	25	44	130	100	5	76
(Ribosomal_S3Ae);(WD40)	1	15	15	23	23	32	135	100	7	65
(Ribosomal_S3Ae);(WD40)	2	12	12	23	23	52	145	100	8	52
(Nrap_D4);(Ribosomal_S3Ae)	1	23	23	24	24	20	503	100	0	96
(Ribosomal_S27e);(RRP7)	1	19	19	21	21	78	584	100	0	90
(Nrap_D3);(WD40)	1	14	14	23	23	20	183	100	0	61
(Nrap_D3);(Ribosomal_S3Ae)	1	18	18	24	24	20	129	100	0	75
(Ank_2);(GFP)	1	10	10	14	14	51	500	100	70	71
(Mpp10);(Nop14)	1	14	14	29	29	36	617	100	0	48
(Nop14);(Ribosom_S12_S23)	1	25	25	27	27	25	499	100	4	93
(Nop14);(RIBIOP_C)	1	27	27	29	29	25	413	70	4	93
(Utp14);(WD40)	1	25	25	27	27	18	431	100	4	93
(Utp14);(WD40)	2	25	25	27	27	26	341	36	0	93
(Utp14);(WD40)	3	22	22	27	27	23	164	100	5	81
(Sof1);(Utp14)	1	29	29	29	29	26	664	100	3	100
(TPR_14);(Utp14)	1	25	25	26	26	24	548	100	4	96
(U3_assoc_6);(Utp14)	1	20	20	28	28	76	160	100	0	71
(BING4CT);(Utp14)	1	26	26	29	29	26	241	100	4	90
(Ribosomal_S7e);(Utp14)	1	23	23	26	26	24	284	100	4	88
(NOP5NT);(Utp14)	1	25	25	27	27	26	190	100	4	93
(Mst1_SARAH);(V-set)	1	15	15	15	15	42	262	100	87	100
(Mst1_SARAH);(V-set)	2	13	13	15	15	33	299	100	85	87
(Brix);(Ebp2)	1	10	10	10	10	89	1716	100	60	100
(RbpA);(Sigma70_r3)	1	15	15	15	15	89	380	100	0	100
(BOP1NT);(Ribosomal_L36e)	1	10	10	13	13	70	583	100	80	77
(BOP1NT);(Pescadillo_N)	1	13	13	13	13	57	1641	100	62	100
(BOP1NT);(Ribosomal_L7Ae)	1	13	13	13	13	57	482	100	62	100
(Cep3);(Skp1_POZ)	1	10	10	10	10	28	254	100	60	100
(MMR_HSR1);(Ribosomal_L14)	1	12	12	16	16	31	167	100	33	75
(EF-hand_7);(EzrA)	1	15	25	16	25	18	776	92	68	94
(EF-hand_7);(EzrA)	2	14	24	16	25	30	686	92	71	88
(Big_8);(SdrG_C_C)	1	26	30	26	30	11	554	97	97	100
(Glyco_transf_5);(Glycos_transf_1)	1	11	17	11	17	16	478	100	100	100
(Melibiase_2);(Melibiase_C)	1	15	28	15	29	10	1045	100	100	100
(Peptidase_S66);(Peptidase_S66C)	1	18	36	19	37	11	922	100	100	95
(Peptidase_S66);(Peptidase_S66C)	2	16	34	19	37	11	559	91	91	84
(B3_4);(PhetRS_B1)	1	11	18	14	26	24	378	100	94	79
(ATP-grasp);(PurK_C)	1	20	30	20	32	11	646	100	100	100
(TetR_C_1);(TetR_N)	1	29	75	33	81	9	441	100	99	88
(TetR_C_1);(TetR_N)	2	11	14	33	81	11	205	0	0	33
(FDX-ACB);(tRNA_synthFbeta)	1	12	31	12	32	20	303	100	94	100
(EnY2);(Sgf11_N)	1	11	14	11	14	47	1276	100	93	100
(ArfA);(PCRF)	1	11	11	11	11	39	731	100	36	100
(ArfA);(RF-1)	1	10	10	11	11	50	475	100	40	91
(ArfA);(Ribosom_S12_S23)	1	11	11	11	11	69	354	100	27	100
(ArfA);(Ribosomal_S5)	1	10	10	11	11	51	117	100	40	91
(GHMP_kinases_N);(MDD_C)	1	17	39	17	39	7	424	100	100	100
(Ribosomal_L11_N);(Ribosomal_L37)	1	18	19	22	23	10	299	100	11	82
(PEPCK_GTP);(PEPCK_N)	1	10	67	10	67	45	2915	100	100	100
(TIP49);(TIP49_C)	1	18	22	18	22	32	755	100	82	100
(TIP49);(TIP49_C)	2	15	19	18	22	33	387	100	79	83
(B5);(PhetRS_B1)	1	10	15	14	26	13	278	100	100	71
(B5);(PhetRS_B1)	2	10	17	14	26	29	1241	100	94	71
(RNase_PH);(Rrp40_N)	1	18	18	18	18	20	383	100	50	100
(PCSK9_C1);(PCSK9_C3)	1	10	15	10	17	76	758	100	100	100
(DUF1729);(SAT)	1	17	17	20	22	82	367	100	47	85
(B5);(tRNA_synthFbeta)	1	13	23	13	26	14	159	100	96	100
(FeoB_Cyto);(FeoB_N)	1	21	31	21	31	10	1122	100	100	100
(AgI_II_C2);(Antigen_C)	1	12	13	12	13	29	529	100	92	100
(JHD);(JmjC)	1	11	27	12	33	19	638	100	100	92
(GramPos_pilinBB);(SpaA)	1	21	24	21	24	8	271	100	100	100
(RIG-I_C);(RIG-I_C-RD)	1	22	31	23	37	23	577	97	81	96
(Helicase_C);(RIG-I_C)	1	29	40	30	44	26	655	100	88	97
(CRM1_repeat_2);(CRM1_repeat_3)	1	11	13	12	17	52	593	100	100	92
(CRM1_repeat);(CRM1_repeat_2)	1	11	13	12	17	42	1033	100	100	92
(CRM1_repeat_2);(Ras)	1	11	44	17	76	50	305	100	86	65
(CRM1_repeat);(Ras)	1	17	76	17	76	41	220	79	61	100
(Glyco_hydro_2_N);(Glyco_hydro2_C5)	1	13	19	17	25	18	274	100	100	76
(Glyco_hydro_2_C);(Glyco_hydro2_C5)	1	13	19	16	23	18	708	100	100	81
(NGP1NT);(NOG1_N)	1	13	13	13	13	43	645	100	31	100
(MMPL);(Sterol-sensing)	1	23	23	24	24	9	1634	100	22	96
(Gram_pos_anchor);(SpaA)	1	17	19	17	19	6	283	100	100	100
(Sec66);(TPR_1)	1	13	13	13	13	28	189	100	8	100
(PSI);(TIG_2)	1	10	10	10	10	56	513	100	90	100
(Sas10);(Utp11)	1	11	11	25	25	27	109	100	0	44
(Nop14);(RTC)	1	20	20	20	20	25	598	100	5	100
(EMG1);(Nop14)	1	25	25	25	25	25	883	100	4	100
(EMG1);(Nop14)	2	21	21	25	25	25	173	100	5	84
(Nop14);(Ribosomal_S13)	1	12	12	14	14	56	525	100	0	86
(Brix);(Nop14)	1	20	20	20	20	25	473	100	5	100
(CBF);(Nop14)	1	26	26	26	26	25	1414	100	4	100
(Bystin);(Nop14)	1	17	17	21	21	83	1255	100	0	81
(Bac_export_1);(FliP)	1	19	19	19	19	16	1908	100	37	100
(Bac_export_1);(FliP)	2	19	19	19	19	16	2084	100	37	100
(Bac_export_1);(FliP)	3	12	12	19	19	19	180	100	58	63
(Bac_export_3);(FliP)	1	19	19	19	19	25	463	100	37	100
(Bac_export_1);(Bac_export_3)	1	19	19	19	19	16	1002	100	37	100
(Citrate_synt);(CoA_binding)	1	10	12	12	14	63	252	100	25	83
(MlaD);(MlaE)	1	16	16	17	17	43	277	100	25	94
(MlaD);(MlaE)	2	10	10	17	17	43	204	100	20	59
(ABC_tran);(MlaE)	1	17	18	18	19	58	797	100	22	94
(ABC_tran);(STAS_2)	1	19	20	20	21	17	651	100	30	95
(TAF4);(WD40)	2	15	15	17	17	79	431	100	0	88
(Bromo_TP);(WD40)	1	25	25	25	25	15	117	100	12	100
(TAF8_C);(WD40)	1	14	14	17	17	42	154	100	0	82
(TFIID_30kDa);(WD40)	1	25	25	25	25	41	162	100	12	100
(TFIID_30kDa);(WD40)	2	19	19	25	25	41	115	100	16	76