PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7WKX

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	95.6	Hu_IGHV7-4-1*03	69.2	H1	13	H1-13-*	-1	KASEYIFTNYGMN	BBABBBBBABEBB
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	95.6	Hu_IGHV7-4-1*03	80.0	H2	10	H2-10-1	20	WIDTNTGEPT	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	95.6	Hu_IGHV7-4-1*03	0.0	H3	10	H3-10-1	20	ANYGWGYFDY	BBBBLLBBAB
A	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	95.6	Hu_IGHV7-4-1*03	100.0	H4	8	H4-8-1	9	LDTSVSTA	BBAAALBB
B	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	95.6	Hu_IGHV7-4-1*03	69.2	H1	13	H1-13-*	-1	KASEYIFTNYGMN	BBABBBBBABBBB
B	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	95.6	Hu_IGHV7-4-1*03	80.0	H2	10	H2-10-1	19	WIDTNTGEPT	BBBAAALBBB
B	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	95.6	Hu_IGHV7-4-1*03	0.0	H3	10	H3-10-1	21	ANYGWGYFDY	BBBBLLBBAB
B	heavy	Homo.sapiens	Hu_IGHV7-4-1*03	95.6	Hu_IGHV7-4-1*03	100.0	H4	8	H4-8-1	11	LDTSVSTA	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	91.3	Hu_IGKV2-28*01	81.2	L1	16	L1-16-1	9	RSSQSLvhsngYTYLH	BBABBABBAALBBBBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	91.3	Hu_IGKV2-28*01	50.0	L2	8	L2-8-1	9	YKVSNHLS	BLEABBBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	91.3	Hu_IGKV2-28*01	28.6	L3	9	L3-9-cis7-1	12	SQSTHVPYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	91.3	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	91.3	Hu_IGKV2-28*01	81.2	L1	16	L1-16-1	10	RSSQSLvhsngYTYLH	BBABBABBAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	91.3	Hu_IGKV2-28*01	50.0	L2	8	L2-8-*	-1	YKVSNHLS	BLEABBBA
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	91.3	Hu_IGKV2-28*01	28.6	L3	9	L3-9-cis7-1	12	SQSTHVPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	91.3	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022