PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PS6

#CDRs = 8; #Clusters = 14.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-18*01	100.0	Hu_IGHV1-18*01	100.0	H1	13	H1-13-1	10	KASGYTFTSYGIS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-18*01	100.0	Hu_IGHV1-18*01	80.0	H2	10	H2-10-1	8	WISPYNGNTH	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-18*01	100.0	Hu_IGHV1-18*01	100.0	H3	12	H3-12-*	-1	ARDGELLGWFDP	BBBAEAALBBBb
C	heavy	Homo.sapiens	Hu_IGHV1-18*01	100.0	Hu_IGHV1-18*01	100.0	H4	8	H4-8-1	6	TDTSTSTA	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*01	97.1	Hu_IGLV2-23*01	100.0	L1	14	L1-14-2	10	TGTSSDVGSyNLVS	BBBAAAAAABBABB
D	lambda	Homo.sapiens	Hu_IGLV2-23*01	97.1	Hu_IGLV2-23*01	87.5	L2	8	L2-8-1	9	YAGSKRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*01	97.1	Hu_IGLV2-23*01	88.9	L3	10	L3-10-2	10	CSYAGSSTWV	BBBAELLBBB
D	lambda	Homo.sapiens	Hu_IGLV2-23*01	97.1	Hu_IGLV2-23*01	100.0	L4	6	L4-6-2	10	KSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	97.3	CDRLenMismatch	-1.0	H1	15	H1-15-2	12	TVFGGSItsSNHYWV	BBBLEBABBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	97.3	Hu_IGHV4-59*11	66.7	H2	9	H2-9-1	15	SMYYSGSTA	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	97.3	Hu_IGHV4-59*11	100.0	H3	18	H3-18-*	-1	ARQigpkRPSQVADWFDP
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	97.3	Hu_IGHV4-59*11	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	8	RASQGISSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	6	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L3	9	L3-9-cis7-1	13	QQLNSYPLT	BBBABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022