PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PS1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-53*04	97.3	Hu_IGHV3-53*04	76.9	H1	13	H1-13-1	8	AASGLTVRSNYMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*04	97.3	Hu_IGHV3-53*04	77.8	H2	9	H2-9-1	8	LIYSGGSTF	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*04	97.3	Hu_IGHV3-53*04	100.0	H3	11	H3-11-*	-1	ARDLVVYGMDV	BBBAEAAEBAB
A	heavy	Homo.sapiens	Hu_IGHV3-53*04	97.3	Hu_IGHV3-53*04	87.5	H4	8	H4-8-1	11	RHDSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	91.7	L1	12	L1-12-1	6	RASQSVSsSSLA	BBABBBBAAABB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	6	YGTSSRAT	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	100.0	L3	8	L3-8-4	19	QQYGSSPL	BBBBABBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022