PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PHW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	84.6	H1	13	H1-13-1	14	KASGFDFSSYAMG	BBBLBBAAABBBB
B	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	50.0	H2	10	H2-10-2	12	GIRNDGSFTL	BBBAALABBB
B	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	40.0	H3	19	H3-19-*	-1	TKSADDgghysDFSGEIDA
B	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	100.0	H4	8	H4-8-1	7	RDNGQSTV	BBAAALBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	95.5	Ch_IGLV1-1*02	50.0	L1	8	L1-8-1	10	SGSTYNYG	BLBABBBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	95.5	Ch_IGLV1-1*02	62.5	L2	8	L2-8-*	-1	YYNDKRPS	BLEABBBA
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	95.5	Ch_IGLV1-1*02	44.4	L3	9	L3-9-1	19	GNSDSRNVA	BEBBLLBBB
C	lambda	Gallus.gallus	Ch_IGLV1-1*02	95.5	Ch_IGLV1-1*02	83.3	L4	6	L4-6-2	12	KSGSTG	BBEABB
E	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	84.6	H1	13	H1-13-1	14	KASGFDFSSYAMG	BBBLBBAAABBBB
E	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	50.0	H2	10	H2-10-2	13	GIRNDGSFTL	BBBAALABBB
E	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	40.0	H3	19	H3-19-*	-1	TKSADDgghysDFSGEIDA
E	heavy	Gallus.gallus	Ch_IGHV1S1*01	91.7	Ch_IGHV1S1*01	100.0	H4	8	H4-8-1	7	RDNGQSTV	BBAAALBB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	95.5	Ch_IGLV1-1*02	50.0	L1	8	L1-8-1	10	SGSTYNYG	BLBABBBB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	95.5	Ch_IGLV1-1*02	62.5	L2	8	L2-8-*	-1	YYNDKRPS	BLEABBBA
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	95.5	Ch_IGLV1-1*02	44.4	L3	9	L3-9-1	18	GNSDSRNVA	BBBBLLBBB
F	lambda	Gallus.gallus	Ch_IGLV1-1*02	95.5	Ch_IGLV1-1*02	83.3	L4	6	L4-6-2	12	KSGSTG	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022