PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LQ7

#CDRs = 8; #Clusters = 15.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	CDRLenMismatch	-1.0	H1	10	H1-10-*	-1	KASGGTFGIS
C	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	100.0	H2	10	H2-10-1	14	RIIPILGTAN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	100.0	H3	17	H3-17-*	-1	ARDGDSGSYYetlGFDY
C	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	75.0	H4	8	H4-8-1	15	ADKSTGTV	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L1	14	L1-14-2	13	TGTSSDVGgYNYVS	BBBAAAAAABABBB
D	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	87.5	L2	8	L2-8-*	-1	YEVNKRPS	BLEBBBBB
D	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	88.9	L3	10	L3-10-2	32	SSYAGSNNLV	BBBAEBLBBB
D	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	12	KSGNTA	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	CDRLenMismatch	-1.0	H1	10	H1-10-*	-1	KASGGTFGIS
F	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	100.0	H2	10	H2-10-1	14	RIIPILGTAN	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	100.0	H3	17	H3-17-*	-1	ARDGDSGSYYetlGFDY
F	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	75.0	H4	8	H4-8-1	15	ADKSTGTV	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L1	14	L1-14-2	14	TGTSSDVGgYNYVS	BBBAAAAAABABBB
G	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	87.5	L2	8	L2-8-*	-1	YEVNKRPS	BEABBBBB
G	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	88.9	L3	10	L3-10-2	32	SSYAGSNNLV	BBBAEBLBBB
G	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	12	KSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	CDRLenMismatch	-1.0	H1	10	H1-10-*	-1	KASGGTFGIS
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	100.0	H2	10	H2-10-1	14	RIIPILGTAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	100.0	H3	17	H3-17-*	-1	ARDGDSGSYYetlGFDY
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	95.9	Hu_IGHV1-69*08	75.0	H4	8	H4-8-1	15	ADKSTGTV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L1	14	L1-14-2	13	TGTSSDVGgYNYVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	87.5	L2	8	L2-8-1	9	YEVNKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	88.9	L3	10	L3-10-2	32	SSYAGSNNLV	BBBAEBLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-8*01	100.0	Hu_IGLV2-8*01	100.0	L4	6	L4-6-2	11	KSGNTA	BBEABB
P	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H1	13	H1-13-1	13	KASGYTFTSYYMH	BBBLBBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	90.0	H2	10	H2-10-1	11	IINSSGGSTS	BBBAAALBBB
P	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H3	22	H3-22-*	-1	ARpprnyydrSGYYQRAEYFQH
P	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	10	RDTSTSTV	BBAAALBB
Q	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L1	11	L1-11-*	-1	QASQDISNYLN	BBABBBAABBB
Q	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	12	YDASNLET	BLLABBBB
Q	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	10	QQYDNPpLT	BBAABBbBB
Q	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
T	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H1	13	H1-13-1	12	KASGYTFTSYYMH	BBBLBBAAABBBB
T	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	90.0	H2	10	H2-10-1	11	IINSSGGSTS	BBBAAALBBB
T	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H3	22	H3-22-*	-1	ARpprnyydrSGYYQRAEYFQH
T	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	10	RDTSTSTV	BBAAALBB
U	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L1	11	L1-11-*	-1	QASQDISNYLN	BBABBBAABBB
U	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	12	YDASNLET	BLLABBBB
U	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	10	QQYDNPpLT	BBAABBbBB
U	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
y	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H1	13	H1-13-1	12	KASGYTFTSYYMH	BBBLBBAAABBBB
y	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	90.0	H2	10	H2-10-1	11	IINSSGGSTS	BBBAAALBBB
y	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H3	22	H3-22-*	-1	ARpprnyydrSGYYQRAEYFQH
y	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	10	RDTSTSTV	BBAAALBB
z	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	7	QASQDISNYLN	BBABBAEABBB
z	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	12	YDASNLET	BLLABBBB
z	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	10	QQYDNPpLT	BBAABBbBB
z	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

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