PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CQC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Rattus.norvegicus	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	100.0	H1	13	H1-13-1	11	AASGFTFSNYGMA	BBBLBBAAABBBB
H	heavy	Rattus.norvegicus	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	70.0	H2	10	H2-10-2	8	SISAGGDKTY	BBBAALABBB
H	heavy	Rattus.norvegicus	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	50.0	H3	10	H3-10-2	15	AKTSRVYFDY	BBBBEABBAB
H	heavy	Rattus.norvegicus	Ra_IGHV5S14*01	93.2	Ra_IGHV5S14*01	75.0	H4	8	H4-8-1	9	RDNAKTTH	BBAAALBB
L	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L1	13	L1-13-2	8	KRSTGNIGSNYVN	BBABEBAAABBBB
L	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L2	8	L2-8-1	9	YRDDKRPD	BLEABBBB
L	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	75.0	L3	8	L3-8-4	24	HSYSSGIV	BBBBABBB
L	lambda	Rattus.norvegicus	Ra_IGLV3S2*01	100.0	Ra_IGLV3S2*01	100.0	L4	8	L4-8-1	10	idRSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022