PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7CN2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	53.8	H1	13	H1-13-*	-1	TASGFTMSRYHMT	BBAABBAAABBBB
G	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	24	IIYARNSDTY	BBBAAALBBB
G	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H3	16	H3-16-*	-1	ARVDSDSsgAFDRLDL
G	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H4	6	H4-6-1	15	KTSTTV	BBAABB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	53.8	H1	13	H1-13-*	-1	TASGFTMSRYHMT	BBAABBAAABBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	24	IIYARNSDTY	BBBAAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H3	16	H3-16-*	-1	ARVDSDSsgAFDRLDL
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H4	6	H4-6-1	15	KTSTTV	BBAABB
I	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	53.8	H1	13	H1-13-*	-1	TASGFTMSRYHMT	BBAABBAAABBBB
I	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	24	IIYARNSDTY	BBBAAALBBB
I	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H3	16	H3-16-*	-1	ARVDSDSsgAFDRLDL
I	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H4	6	H4-6-1	15	KTSTTV	BBAABB
J	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	53.8	H1	13	H1-13-*	-1	TASGFTMSRYHMT	BBAABBAAABBBB
J	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	24	IIYARNSDTY	BBBAAALBBB
J	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H3	16	H3-16-*	-1	ARVDSDSsgAFDRLDL
J	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H4	6	H4-6-1	15	KTSTTV	BBAABB
K	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	53.8	H1	13	H1-13-*	-1	TASGFTMSRYHMT	BBAABBAAABBBB
K	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	18	IIYARNSDTY	BBBAAALBBB
K	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H3	16	H3-16-*	-1	ARVDSDSsgAFDRLDL
K	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H4	6	H4-6-1	15	KTSTTV	BBAABB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	63.6	L1	11	L1-11-1	20	QASQSIGGYLS	BBABBAEABBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	87.5	L2	8	L2-8-1	18	YRASTLAS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	40.0	L3	12	L3-12-*	-1	QQGYTssdINNA
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	100.0	L4	6	L4-6-1	16	GSGTEY	EBEABB
M	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	53.8	H1	13	H1-13-*	-1	TASGFTMSRYHMT	BBAABBAAABBBB
M	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	24	IIYARNSDTY	BBBAAALBBB
M	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H3	16	H3-16-*	-1	ARVDSDSsgAFDRLDL
M	heavy	Oryctolagus.cuniculus	Rb_IGHV1S69*01	94.1	Rb_IGHV1S69*01	100.0	H4	6	H4-6-1	15	KTSTTV	BBAABB
g	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	63.6	L1	11	L1-11-1	20	QASQSIGGYLS	BBABBAEABBB
g	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	87.5	L2	8	L2-8-1	18	YRASTLAS	BLLABBBB
g	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	40.0	L3	12	L3-12-*	-1	QQGYTssdINNA
g	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	100.0	L4	6	L4-6-1	16	GSGTEY	EBEABB
i	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	63.6	L1	11	L1-11-1	20	QASQSIGGYLS	BBABBAEABBB
i	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	87.5	L2	8	L2-8-1	18	YRASTLAS	BLLABBBB
i	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	40.0	L3	12	L3-12-*	-1	QQGYTssdINNA
i	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	100.0	L4	6	L4-6-1	16	GSGTEY	EBEABB
j	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	63.6	L1	11	L1-11-1	20	QASQSIGGYLS	BBABBAEABBB
j	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	87.5	L2	8	L2-8-1	18	YRASTLAS	BLLABBBB
j	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	40.0	L3	12	L3-12-*	-1	QQGYTssdINNA
j	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	100.0	L4	6	L4-6-1	16	GSGTEY	EBEABB
k	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	63.6	L1	11	L1-11-1	20	QASQSIGGYLS	BBABBAEABBB
k	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	87.5	L2	8	L2-8-1	18	YRASTLAS	BLLABBBB
k	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	40.0	L3	12	L3-12-*	-1	QQGYTssdINNA
k	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	100.0	L4	6	L4-6-1	16	GSGTEY	EBEABB
m	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	63.6	L1	11	L1-11-1	20	QASQSIGGYLS	BBABBAEABBB
m	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	87.5	L2	8	L2-8-1	18	YRASTLAS	BLLABBBB
m	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	40.0	L3	12	L3-12-*	-1	QQGYTssdINNA
m	kappa	Oryctolagus.cuniculus	Rb_IGKV1S3*01	83.6	Rb_IGKV1S3*01	100.0	L4	6	L4-6-1	16	GSGTEY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022