PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7A0W

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	92.3	H1	13	H1-13-1	12	KASGFTFSDYGMG	BBBLBBAAABBBB
C	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	60.0	H2	10	H2-10-6	17	GIYTTGSGTR	BBBABLLBBB
C	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	60.0	H3	15	H3-15-*	-1	AKSTGRDYyGGGIDA
C	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	100.0	H4	8	H4-8-1	7	RDNGQSTV	BBAAALBB
D	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	50.0	L1	8	L1-8-1	12	SGGTYSYG	BLBABBBB
D	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	62.5	L2	8	L2-8-*	-1	YWNDKRPS	BLLABBBA
D	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	66.7	L3	10	L3-10-1	20	GSADSSGTAI	BBBBAALBBB
D	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	83.3	L4	6	L4-6-2	21	KSGSTH	BBEABB
E	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	92.3	H1	13	H1-13-1	11	KASGFTFSDYGMG	BBBLBBAAABBBB
E	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	60.0	H2	10	H2-10-2	14	GIYTTGSGTR	BBBAALABBB
E	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	60.0	H3	15	H3-15-*	-1	AKSTGRDYyGGGIDA
E	heavy	Gallus.gallus	Ch_IGHV1-1*01	94.4	Ch_IGHV1-1*01	100.0	H4	8	H4-8-1	8	RDNGQSTV	BBAAALBB
F	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	50.0	L1	8	L1-8-1	12	SGGTYSYG	BLBABBBB
F	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	62.5	L2	8	L2-8-*	-1	YWNDKRPS	BLEABBBA
F	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	66.7	L3	10	L3-10-1	21	GSADSSGTAI	BBBBAALBBB
F	lambda	Gallus.gallus	Ch_IGLV1S1*01	90.9	Ch_IGLV1S1*01	83.3	L4	6	L4-6-2	19	KSGSTH	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022