PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6ZTF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	93.3	H1	15	H1-15-2	13	AISGDSVSSqsAAWN	BBBLBBAABAABBBB
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	H2	11	H2-11-1	7	RIYYRSKwYND	BBBBBLBBBBB
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	H3	13	H3-13-*	-1	ARGEGYGREGFAI	BBBBEALAAEBAB
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	18	PDTSKNQF	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	63.6	L1	11	L1-11-1	5	RASQTISNTLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	5	YAASNLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	42.9	L3	8	L3-8-*	-1	QQYLSWFT	BBAABBLB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	93.3	H1	15	H1-15-2	13	AISGDSVSSqsAAWN	BBBLBBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	90.9	H2	11	H2-11-1	7	RIYYRSKwYND	BBBBBLBBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	H3	13	H3-13-*	-1	ARGEGYGREGFAI	BBBBEALAAEBAB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	17	PDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	63.6	L1	11	L1-11-1	5	RASQTISNTLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	7	YAASNLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	42.9	L3	8	L3-8-*	-1	QQYLSWFT	BBAABBLB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022