PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6YAX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Ca_IGHV1S20*01	76.9	H1	13	H1-13-1	13	AASGFTFSTYGMH	BBBLBBAAABBBB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Ca_IGHV1S20*01	60.0	H2	10	H2-10-2	10	VISYDGSNKY	BBBAALABBB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	50.0	H3	10	H3-10-1	10	ARENFDAFDV	BBBBLLBBAB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
III	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Ca_IGHV1S20*01	76.9	H1	13	H1-13-1	9	AASGFTFSTYGMH	BBBLBBAAABBBB
III	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Ca_IGHV1S20*01	60.0	H2	10	H2-10-2	18	VISYDGSNKY	BBBAALABBB
III	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	50.0	H3	10	H3-10-1	11	ARENFDAFDV	BBBBLLBBAB
III	heavy	Homo.sapiens	Hu_IGHV3-23*05	98.6	Hu_IGHV3-23*05	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Ca_IGLV1-2*01	78.6	L1	14	L1-14-3	12	TGSSSNIGAgYDVH	BBBAABAAALBBBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Ca_IGLV1-2*01	62.5	L2	8	L2-8-1	11	YSNSQRPS	BLLABBBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	88.9	L3	12	L3-12-*	-1	AAWDDSLNgQVV
LLL	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	100.0	L4	6	L4-6-2	8	KSGTSA	BBEABB
MMM	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Ca_IGLV1-2*01	78.6	L1	14	L1-14-3	15	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
MMM	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Ca_IGLV1-2*01	62.5	L2	8	L2-8-1	10	YSNSQRPS	BLLABBBB
MMM	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	88.9	L3	12	L3-12-*	-1	AAWDDSLNgQVV
MMM	lambda	Homo.sapiens	Hu_IGLV1-47*02	100.0	Hu_IGLV1-47*02	100.0	L4	6	L4-6-2	17	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022