PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WM9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	90.4	Hu_IGHV3-30*18	84.6	H1	13	H1-13-1	9	AASGFMFNSYGMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	90.4	Hu_IGHV3-30*18	70.0	H2	10	H2-10-2	8	FISYDGSDDY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	90.4	Hu_IGHV3-30*18	100.0	H3	13	H3-13-*	-1	AKESNYGENAFDV	BBBBAAEAABBAB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	90.4	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	78.6	L1	14	L1-14-2	7	TGTSNDVGfYNFVS	BBBAAAAAABABBB
C	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	75.0	L2	8	L2-8-1	9	YDVTERPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	88.9	L3	10	L3-10-2	8	CSYAGTYTFV	BBBAELLBBB
C	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-30*18	90.4	Hu_IGHV3-30*18	84.6	H1	13	H1-13-1	8	AASGFMFNSYGMH	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*18	90.4	Hu_IGHV3-30*18	70.0	H2	10	H2-10-2	8	FISYDGSDDY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-30*18	90.4	Hu_IGHV3-30*18	100.0	H3	13	H3-13-*	-1	AKESNYGENAFDV	BBBBAAEAABBAB
E	heavy	Homo.sapiens	Hu_IGHV3-30*18	90.4	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	78.6	L1	14	L1-14-2	9	TGTSNDVGfYNFVS	BBBAAAAAABABBB
F	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	75.0	L2	8	L2-8-1	14	YDVTERPS	BLLABBBB
F	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	88.9	L3	10	L3-10-2	6	CSYAGTYTFV	BBBAELLBBB
F	lambda	Homo.sapiens	Hu_IGLV2-11*01	97.1	Hu_IGLV2-11*01	100.0	L4	6	L4-6-2	6	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022