PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WJ1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	93.3	H1	15	H1-15-*	-1	AISGDSVSSnsVAWN	BBBLBBAABBLBBBB
G	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	81.8	H2	11	H2-11-1	6	RTYfRSKWYTD	BBBBBLBBBBB
G	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	50.0	H3	17	H3-17-*	-1	VRGIIFNwplGGWSFDL
G	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	87.5	H4	8	H4-8-1	20	PDTSKNEF	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	93.3	H1	15	H1-15-*	-1	AISGDSVSSnsVAWN	BBBLBBAABBLBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	81.8	H2	11	H2-11-1	5	RTYfRSKWYTD	BBBBBLBBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	50.0	H3	17	H3-17-*	-1	VRGIIFNwplGGWSFDL
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	87.5	H4	8	H4-8-1	22	PDTSKNEF	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	91.7	L1	12	L1-12-1	10	RASQSVaSSYLA	BBABBBBAAABB
I	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	37.5	L2	8	L2-8-1	13	YATINRAA	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	28.6	L3	10	L3-10-*	-1	QQFDSsSMYT	BBBBAABABB
I	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
J	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	93.3	H1	15	H1-15-*	-1	AISGDSVSSnsVAWN	BBBLBBAABBLBBBB
J	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	81.8	H2	11	H2-11-1	7	RTYfRSKWYTD	BBBBBLBBBBB
J	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	50.0	H3	17	H3-17-*	-1	VRGIIFNwplGGWSFDL
J	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	87.5	H4	8	H4-8-1	20	PDTSKNEF	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	91.7	L1	12	L1-12-1	11	RASQSVaSSYLA	BBABBBBAAABB
K	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	37.5	L2	8	L2-8-1	15	YATINRAA	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	28.6	L3	10	L3-10-*	-1	QQFDSsSMYT	BBBBAABABB
K	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	91.7	L1	12	L1-12-1	12	RASQSVaSSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	37.5	L2	8	L2-8-1	13	YATINRAA	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	28.6	L3	10	L3-10-*	-1	QQFDSsSMYT	BBBBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022