PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6WJ0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	93.3	H1	15	H1-15-2	13	AISGDSVSSnsVAWN	BBBLBBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	81.8	H2	11	H2-11-1	6	RTYfRSKWYTD	BBBBBLBBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	50.0	H3	17	H3-17-*	-1	VRGIIFNwplGGWSFDL
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	89.0	Hu_IGHV6-1*01	87.5	H4	8	H4-8-1	18	PDTSKNEF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	91.7	L1	12	L1-12-1	7	RASQSVaSSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	37.5	L2	8	L2-8-1	6	YATINRAA	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	28.6	L3	10	L3-10-*	-1	QQFDSsSMYT	BBBBAABABB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	91.3	Hu_IGKV3D-20*02	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022